Tissue expression of IMMT - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	43.9	TPM
GTEx:	22.7	RPKM
FANTOM5:	71.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Low

Antibody staining	Antibody HPA036164	Antibody HPA036165	Antibody CAB022439
Adipocytes	Not detected	Not detected	Not detected
Fibroblasts	Not detected	Not detected	Low
Peripheral nerve	Not detected	Not detected	Not detected
Chondrocytes	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA036164	Antibody HPA036165	Antibody CAB022439
Adipocytes	Not detected	Not detected	Low
Fibroblasts	Not detected	Not detected	Not detected
Peripheral nerve	Not detected	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	43.9

Female, age 80

Sample 1
TPM: 42.7

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 43.3

Female, age 57

Sample 3
TPM: 40.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 51.1

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 41.3

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	22.7

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 23.1

Samples: 350

Max RPKM: 35.9
Min RPKM: 15.3
Std RPKM: 3.4
Median RPKM: 22.8

GTEX-WY7C-2426-SM-3NB2V

35.9

GTEX-O5YT-0226-SM-32PK5

33.1

GTEX-QESD-1526-SM-2S1QT

32.1

GTEX-SNMC-1326-SM-2XCFK

32.1

GTEX-ZP4G-2326-SM-57WEM

32.1

GTEX-QCQG-1826-SM-2S1P2

31.7

GTEX-ZQG8-1526-SM-5HL65

31.5

GTEX-OHPN-0226-SM-48TBV

31.3

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 22.0

Samples: 227

Max RPKM: 41.2
Min RPKM: 13.4
Std RPKM: 4
Median RPKM: 21.5

GTEX-Y5LM-0826-SM-4VDSW

41.2

GTEX-XV7Q-1726-SM-4BRUU

33.7

GTEX-133LE-0926-SM-5P9J1

33.3

GTEX-ZLWG-0726-SM-5S2NG

32.5

GTEX-1339X-0726-SM-5L3FF

32.4

GTEX-1122O-0926-SM-5N9C9

32.3

GTEX-ZZPU-0326-SM-5N9BJ

32.2

GTEX-11DXX-2026-SM-5EGJL

32.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	71.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 71.8

FF:10010-101C1

65,65,76 years, mixed

71.8