Tissue expression of IMMT - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	57.5	TPM
GTEx:	20.9	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Low
Neuropil:	Not detected

Antibody staining	Antibody HPA036164	Antibody HPA036165	Antibody CAB022439
Endothelial cells	Not detected	Not detected	Low
Glial cells	Not detected	Not detected	Not detected
Neuronal cells	Low	Low	Medium
Neuropil	Not detected	Not detected	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	57.5

Male, age 5

Sample 1
TPM: 61.1

Female, age 40

Sample 2
TPM: 46.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 64.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	20.9

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 20.5

Samples: 114

Max RPKM: 30.9
Min RPKM: 9.9
Std RPKM: 3.7
Median RPKM: 20.8

GTEX-TSE9-3026-SM-3DB76

30.9

GTEX-PVOW-2526-SM-2XCF7

28.6

GTEX-13FHO-3026-SM-5J1O9

27.7

GTEX-QMR6-1426-SM-32PLA

27.7

GTEX-WVLH-3026-SM-3MJG9

27.6

GTEX-T6MN-2626-SM-32PMQ

26.5

GTEX-11DXY-3226-SM-5GIDE

26.1

GTEX-T2IS-3026-SM-32QPM

26.1

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 21.4

Samples: 108

Max RPKM: 33.8
Min RPKM: 7
Std RPKM: 5.7
Median RPKM: 22.2

GTEX-QVUS-0011-R10A-SM-3GIK3

33.8

GTEX-T6MN-0011-R10A-SM-32QP7

31.9

GTEX-13RTJ-0011-R10b-SM-5O9CW

30.3

GTEX-13FHO-0011-R10b-SM-5J2MM

29.9

GTEX-S7SE-0011-R10A-SM-2XCDF

29.9

GTEX-145MG-0011-R10a-SM-5PNWG

29.6

GTEX-WVLH-0011-R10A-SM-3MJFM

29.6

GTEX-QDT8-0011-R10A-SM-32PKG

29.3

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue