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RPA1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.7TPM
GTEx:14.1RPKM
FANTOM5:31.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Chondrocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA006914

  

Antibody CAB004563

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Not detected   Low  

Chondrocytes

 Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA006914

  

Antibody CAB004563

  

Adipocytes

 High   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

22.7
N/A Female, age 80
Sample 1
TPM: 24.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 22.1
N/A Female, age 57
Sample 3
TPM: 18.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 27.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 20.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.7
Samples: 350

Max RPKM: 23.3
Min RPKM: 7.6
Std RPKM: 2
Median RPKM: 15.8
GTEX-131XE-2426-SM-5EQ5V 23.3
GTEX-13FHP-0226-SM-5K7WD 21.7
GTEX-QV31-1326-SM-2S1QE 20.8
GTEX-TML8-2026-SM-32QOP 20.8
GTEX-14BMV-0226-SM-5S2N2 20.6
GTEX-12WSD-0226-SM-59HKO 20.0
GTEX-QMRM-1726-SM-2S1QG 20.0
GTEX-144GL-0226-SM-5QGOX 19.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.8
Samples: 227

Max RPKM: 16.5
Min RPKM: 6.1
Std RPKM: 1.7
Median RPKM: 11.8
GTEX-12WSG-0426-SM-5FQSE 16.5
GTEX-ZUA1-2126-SM-57YRB 16.2
GTEX-ZYFG-1426-SM-5GICS 15.9
GTEX-11DXY-0326-SM-5H12F 15.7
GTEX-X3Y1-0926-SM-3P5YT 15.3
GTEX-1211K-1226-SM-5EQ4N 15.0
GTEX-UPK5-1826-SM-3GAEB 14.9
GTEX-ZT9X-0926-SM-5O9C4 14.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

31.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 31.7
FF:10010-101C1 65,65,76 years, mixed 31.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.