We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MATN2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:39.3TPM
GTEx:14.3RPKM
FANTOM5:18.8Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:Medium
 

Antibody staining

Antibody CAB033879

 

Cells in glomeruli

Medium  

Cells in tubules

Medium  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

39.3

overview Female, age 58
Sample 1
TPM: 32.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 23.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 55.7
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 27.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 35.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 61.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 16.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 63.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 37.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

14.3

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 14.3
Samples: 32

Max RPKM: 46.1
Min RPKM: 2.5
Std RPKM: 11.3
Median RPKM: 8.9
GTEX-RN64-1626-SM-48FD7 46.1
GTEX-147F4-2626-SM-5Q5CS 40.5
GTEX-11TTK-1926-SM-5PNW8 31.1
GTEX-13OVL-1826-SM-5KLZR 30.5
GTEX-13112-2126-SM-5GCO4 28.4
GTEX-ZYT6-2226-SM-5GIC9 28.3
GTEX-13OVI-1126-SM-5KLZF 27.6
GTEX-12696-0926-SM-5FQTV 20.0
GTEX-ZLFU-0926-SM-5P9F8 19.2
GTEX-ZVZP-0926-SM-5GIDB 17.3
GTEX-1399S-0526-SM-5IJG8 16.9
GTEX-ZYFG-1626-SM-5GZYY 15.2
GTEX-QLQW-1626-SM-4R1K1 13.3
GTEX-145MN-0326-SM-5QGQI 11.8
GTEX-13RTJ-2226-SM-5S2Q1 10.7
GTEX-11GS4-2326-SM-5A5KS 9.1
GTEX-XPVG-0526-SM-4B65N 8.7
GTEX-11OF3-1326-SM-5N9FJ 8.2
GTEX-T5JC-1526-SM-4DM68 7.9
GTEX-13OW6-1826-SM-5N9F9 7.2
GTEX-QDVN-1626-SM-48TZC 6.4
GTEX-13NYB-1726-SM-5N9G2 6.2
GTEX-12WSG-0826-SM-5EQ5A 6.2
GTEX-P4QS-1126-SM-3NMD5 6.1
GTEX-ZC5H-1726-SM-5HL7X 6.1
GTEX-UPIC-1126-SM-4IHLO 5.4
GTEX-ZYFD-1526-SM-5NQ7T 5.1
GTEX-NPJ8-2226-SM-3TW8D 5.0
GTEX-Y5V6-2026-SM-5IFHO 4.8
GTEX-N7MS-1626-SM-3LK5F 3.2
GTEX-1497J-0826-SM-5NQAJ 3.2
GTEX-13O1R-2526-SM-5N9FW 2.5
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

18.8

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 18.8
FF:10017-101C8 60,62,63 years, female 18.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.