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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:90.3TPM
GTEx:77.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA031813

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

90.3

N/A Male, age 5
Sample 1
TPM: 104.8
overview Female, age 40
Sample 2
TPM: 71.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 94.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

77.8

GTEx sample id

RPKM

68.483.593.437.1116.80102030405060708090100110120130
 
68.483.593.437.1116.80102030405060708090100110120130

Brain - Cortex

Brain - Cortex
RPKM: 81.1
Samples: 114

Max RPKM: 132.6
Min RPKM: 37.1
Std RPKM: 18.8
Median RPKM: 83.5
GTEX-T5JC-2426-SM-3NMDB 132.6
GTEX-14BMV-3026-SM-5S2PQ 116.8
GTEX-13VXU-2926-SM-5LU5C 115.8
GTEX-Y111-2726-SM-4TT3N 113.5
GTEX-117XS-3026-SM-5N9CA 111.4
GTEX-12WSC-3026-SM-5GCNF 109.9
GTEX-13SLX-3126-SM-5S2Q5 109.7
GTEX-WVLH-3026-SM-3MJG9 109.6
GTEX-T6MN-2626-SM-32PMQ 108.9
GTEX-145MF-2726-SM-5O995 105.6
GTEX-WL46-2926-SM-3LK82 104.4
GTEX-13FXS-3126-SM-5J2NN 104.2
GTEX-X585-3026-SM-46MWF 103.8
GTEX-Z93S-2926-SM-57WB9 103.3
GTEX-12126-1026-SM-5P9JJ 102.3
GTEX-145MG-3026-SM-5RQJA 101.2
GTEX-14ASI-3026-SM-5S2PN 101.0
GTEX-11OF3-2926-SM-5HL78 100.6
GTEX-X4XX-3026-SM-3NMB2 99.3
GTEX-13OW6-3026-SM-5J2MI 99.2
GTEX-WWYW-3126-SM-3NB39 98.2
GTEX-YJ89-3026-SM-5IFJI 97.4
GTEX-13NYB-3026-SM-5IJD7 97.3
GTEX-13O3Q-2926-SM-5KM45 96.7
GTEX-RNOR-2326-SM-2TF4I 96.2
GTEX-12ZZX-2926-SM-5GCOQ 95.3
GTEX-Q2AG-2926-SM-2HMJ3 94.8
GTEX-13O3O-3126-SM-5KM3H 94.3
GTEX-ZAK1-3026-SM-5S2MJ 93.4
GTEX-11GSO-2926-SM-5HL73 93.3
GTEX-T2IS-3026-SM-32QPM 93.1
GTEX-1117F-3226-SM-5N9CT 92.3
GTEX-ZYFD-3026-SM-5E44C 91.4
GTEX-1313W-3126-SM-5LZUI 91.1
GTEX-13FLW-1426-SM-5K7YE 90.3
GTEX-11ZUS-2926-SM-5FQSL 90.0
GTEX-145MH-3026-SM-5Q5DZ 89.8
GTEX-13OW8-2826-SM-5L3GC 88.9
GTEX-YFC4-3126-SM-5PNV6 88.7
GTEX-R55F-1326-SM-5S2V4 88.6
GTEX-13FHO-3026-SM-5J1O9 88.5
GTEX-11OC5-0726-SM-5P9JK 88.4
GTEX-XLM4-3026-SM-4AT6L 88.2
GTEX-144GL-3026-SM-5Q5CW 88.0
GTEX-Y8DK-0826-SM-4TT3T 88.0
GTEX-12ZZY-3026-SM-5GCOU 87.7
GTEX-WZTO-2926-SM-3NM9I 87.0
GTEX-13OVH-3026-SM-5MR4N 86.9
GTEX-WHSE-3026-SM-3P5ZH 86.9
GTEX-QVJO-1426-SM-2S1QY 86.5
GTEX-XOTO-3026-SM-4B65M 86.4
GTEX-11DXY-3226-SM-5GIDE 86.0
GTEX-ZUA1-3026-SM-59HJC 85.7
GTEX-131YS-3126-SM-5KLYT 84.8
GTEX-11DXW-1126-SM-5H12Q 84.0
GTEX-ZVT3-3026-SM-5E43N 84.0
GTEX-1399T-3026-SM-5KLZC 83.7
GTEX-11ONC-2926-SM-5P9JM 83.3
GTEX-145LS-3126-SM-5Q5BY 82.7
GTEX-13S7M-3126-SM-5RQJQ 82.6
GTEX-11GS4-3126-SM-5A5LH 82.2
GTEX-12WSH-3026-SM-5CVNI 81.7
GTEX-11PRG-2926-SM-5987A 81.2
GTEX-12ZZW-2926-SM-5LZUP 80.8
GTEX-ZZPT-3026-SM-5GZXH 80.4
GTEX-13QIC-2926-SM-5J2NF 80.1
GTEX-ZE7O-3126-SM-5HL5X 79.8
GTEX-11NUK-2926-SM-5A5MD 78.3
GTEX-1128S-2726-SM-5H12C 77.4
GTEX-ZAJG-3126-SM-5HL9J 77.3
GTEX-13NYS-3126-SM-5KLYV 76.3
GTEX-1192X-3126-SM-5N9BY 75.0
GTEX-13PL6-3126-SM-5LUAR 73.4
GTEX-12ZZZ-3026-SM-5BC67 72.6
GTEX-13NYC-2826-SM-5K7WR 72.5
GTEX-13FHP-3026-SM-5IJBS 72.4
GTEX-QVUS-2826-SM-3GADB 72.0
GTEX-11EI6-3026-SM-5GZZO 71.2
GTEX-PVOW-2526-SM-2XCF7 71.1
GTEX-13X6J-3026-SM-5Q5CU 70.8
GTEX-144FL-3026-SM-5O99C 70.6
GTEX-12WSD-3126-SM-5HL7P 70.4
GTEX-11O72-2926-SM-5BC4V 70.1
GTEX-11EMC-3226-SM-5EGKW 69.0
GTEX-111FC-3126-SM-5GZZ2 68.5
GTEX-147GR-3026-SM-5S2ML 68.4
GTEX-14A5I-2926-SM-5Q5CQ 67.5
GTEX-TSE9-3026-SM-3DB76 67.2
GTEX-QDT8-2926-SM-32PKC 66.4
GTEX-139T8-1026-SM-5J2MC 66.0
GTEX-132Q8-3026-SM-5PNVG 65.6
GTEX-NPJ8-1526-SM-2D7VU 65.1
GTEX-131XW-3126-SM-5LZUC 64.9
GTEX-11WQK-3026-SM-5EQL6 64.1
GTEX-13OW7-3026-SM-5L3GY 63.8
GTEX-OXRN-2426-SM-2I5EQ 63.8
GTEX-QMR6-1426-SM-32PLA 63.2
GTEX-NPJ7-2726-SM-2I3FT 62.7
GTEX-RU72-3026-SM-5SI7Y 61.1
GTEX-UTHO-3026-SM-3GAFB 60.3
GTEX-13JUV-2926-SM-5LZX7 59.8
GTEX-11NV4-2126-SM-5N9DS 57.9
GTEX-13JVG-3126-SM-5L3FH 52.4
GTEX-13X6K-2926-SM-5Q5D5 49.2
GTEX-13OVJ-2826-SM-5L3GW 48.5
GTEX-N7MT-1126-SM-5SI7V 48.0
GTEX-11TTK-2926-SM-5PNYP 47.8
GTEX-1445S-3026-SM-5O9BR 47.6
GTEX-13PVQ-3026-SM-5SI93 47.1
GTEX-13IVO-2926-SM-5L3CZ 45.7
GTEX-12WSA-2926-SM-5EQ4D 44.9
GTEX-11GSP-3226-SM-5986O 42.1
GTEX-PWO3-0926-SM-2I5EY 40.3
GTEX-13G51-3026-SM-5IJB8 37.1
Show all
57.374.889.227.9126.20102030405060708090100110120
 
57.374.889.227.9126.20102030405060708090100110120

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 74.4
Samples: 108

Max RPKM: 126.2
Min RPKM: 27.9
Std RPKM: 21.6
Median RPKM: 74.8
GTEX-13O3O-0011-R10a-SM-5LUA9 126.2
GTEX-13OW7-0011-R10a-SM-5L3H3 126.1
GTEX-12WSC-0011-R10a-SM-5GU57 122.1
GTEX-13SLX-0011-R10a-SM-5P9HV 117.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 112.8
GTEX-13N1W-0011-R10b-SM-5MR4H 109.0
GTEX-13FXS-0011-R10a-SM-5J2MA 104.3
GTEX-13OW6-0011-R10a-SM-5L3HE 103.8
GTEX-13NYS-0011-R10a-SM-5MR4S 103.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 103.0
GTEX-12WSE-0011-R10b-SM-5P9JV 101.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 101.2
GTEX-12WSH-0011-R10a-SM-5LZUS 100.9
GTEX-14BIN-0011-R10a-SM-5S2UA 100.0
GTEX-13O3Q-0011-R10b-SM-5KM39 97.4
GTEX-12WSF-0011-R10a-SM-5LZVH 95.8
GTEX-T6MN-0011-R10A-SM-32QP7 95.6
GTEX-NL3H-0011-R10A-SM-2I3E9 94.5
GTEX-1313W-0011-R10b-SM-5DUXA 93.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 93.2
GTEX-X585-0011-R10A-SM-46MUY 92.9
GTEX-13X6J-0011-R10b-SM-5PNWA 92.7
GTEX-145MG-0011-R10a-SM-5PNWG 90.9
GTEX-YFC4-0011-R10a-SM-4SOK5 90.0
GTEX-145MH-0011-R10b-SM-5PNUK 89.6
GTEX-T5JC-0011-R10A-SM-32PM2 89.5
GTEX-13CZV-0011-R10b-SM-5LZYD 89.3
GTEX-147GR-0011-R10b-SM-5S2UM 89.2
GTEX-13QIC-0011-R10a-SM-5O9C7 88.4
GTEX-WL46-0011-R10A-SM-3MJFQ 87.7
GTEX-YJ89-0011-R10a-SM-4SOK9 87.2
GTEX-131YS-0011-R10b-SM-5EQ5N 86.7
GTEX-13FHO-0011-R10b-SM-5J2MM 86.2
GTEX-131XH-0011-R10a-SM-5EGLJ 84.4
GTEX-13NYB-0011-R10a-SM-5KM43 84.2
GTEX-N7MS-0011-R10A-SM-2HMJK 83.5
GTEX-X4XX-0011-R10B-SM-46MWO 83.3
GTEX-11H98-0011-R10b-SM-5NQ98 82.4
GTEX-13S7M-0011-R10b-SM-5PNZB 82.3
GTEX-S7SE-0011-R10A-SM-2XCDF 82.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 82.0
GTEX-13OVL-0011-R10a-SM-5L3GS 81.3
GTEX-WVLH-0011-R10A-SM-3MJFM 81.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 81.1
GTEX-145LS-0011-R10a-SM-5PNUQ 81.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 81.1
GTEX-N7MT-0011-R10A-SM-2I3E1 80.5
GTEX-WZTO-0011-R10B-SM-4E3KB 78.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 78.3
GTEX-Z93S-0011-R10a-SM-4RGNM 77.7
GTEX-13FLW-0011-R10b-SM-5LZZF 76.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 76.5
GTEX-14BIL-0011-R10a-SM-5SI75 75.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 75.1
GTEX-13X6K-0011-R10a-SM-5P9JR 74.5
GTEX-ZF28-0011-R10a-SM-4WWEH 74.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 73.6
GTEX-13OW8-0011-R10a-SM-5L3H6 73.1
GTEX-147F4-0011-R10b-SM-5S2WC 73.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 73.0
GTEX-RVPU-0011-R10A-SM-2XCAH 72.8
GTEX-12WSM-0011-R10a-SM-5DUWV 72.7
GTEX-13G51-0011-R10b-SM-5LZYF 72.3
GTEX-13SLW-0011-R10a-SM-5S2UI 72.1
GTEX-XLM4-0011-R10A-SM-4AT5P 71.9
GTEX-13X6I-0011-R10a-SM-5PNWI 71.4
GTEX-ZVT3-0011-R10b-SM-57WB6 70.7
GTEX-WWYW-0011-R10A-SM-3NB35 70.5
GTEX-145LU-0011-R10a-SM-5PNWJ 70.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 70.4
GTEX-13QJC-0011-R10a-SM-5SI63 68.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 67.7
GTEX-11WQC-0011-R10a-SM-57WCT 67.5
GTEX-12126-0011-R10b-SM-5BC6T 65.8
GTEX-13JUV-0011-R10b-SM-5LZXR 65.4
GTEX-P44H-0011-R10A-SM-2XCEK 65.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 64.8
GTEX-X4EP-0011-R10B-SM-4QASJ 60.1
GTEX-TSE9-0011-R10A-SM-3DB7O 59.6
GTEX-ZUA1-0011-R10a-SM-51MT6 58.9
GTEX-QMR6-0011-R10A-SM-32PKO 57.3
GTEX-1477Z-0011-R10b-SM-5S2RF 57.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 55.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 54.7
GTEX-NL4W-0011-R10A-SM-2I3DY 54.1
GTEX-12WSA-0011-R10b-SM-5P9ET 53.3
GTEX-OXRN-0011-R10A-SM-2I5GC 52.8
GTEX-X261-0011-R10B-SM-4E3JT 52.6
GTEX-139TS-0011-R10a-SM-5K7TU 51.0
GTEX-QVUS-0011-R10A-SM-3GIK3 49.6
GTEX-12WSD-0011-R10b-SM-5GU79 49.2
GTEX-131XW-0011-R10a-SM-5DUVA 49.1
GTEX-11WQK-0011-R10a-SM-5BC6R 48.2
GTEX-13NZA-0011-R10b-SM-5KM54 48.0
GTEX-QDT8-0011-R10A-SM-32PKG 47.5
GTEX-ZXG5-0011-R10a-SM-57WDD 47.4
GTEX-14753-0011-R10b-SM-5S2WE 45.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 44.8
GTEX-11ZUS-0011-R10b-SM-5BC79 43.4
GTEX-13IVO-0011-R10a-SM-5LZY3 42.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 40.1
GTEX-13JVG-0011-R10b-SM-5KM2P 39.9
GTEX-ZV68-0011-R10a-SM-51MT7 36.5
GTEX-OXRO-0011-R10A-SM-2I5EH 36.2
GTEX-1445S-0011-R10a-SM-5PNWB 35.2
GTEX-13N2G-0011-R10a-SM-5MR34 35.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 29.9
GTEX-XMD1-0011-R10A-SM-4AT4A 27.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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