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REEP2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.5TPM
GTEx:8.0RPKM
FANTOM5:3.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Not detected
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA031813

  

Endothelial cells

 High  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

3.5
overview Male, age 54
Sample 1
TPM: 3.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 1.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 2.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 11.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 1.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 0.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 6.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 2.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 3.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 4.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 4.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.0

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 11.8
Samples: 149

Max RPKM: 22.8
Min RPKM: 4.1
Std RPKM: 3.7
Median RPKM: 11
GTEX-Z93S-2626-SM-57WBX 22.8
GTEX-YECK-2826-SM-5IFHF 21.5
GTEX-13OW6-2226-SM-5N9FL 20.7
GTEX-13G51-2126-SM-5IJD9 20.1
GTEX-11ZTS-1526-SM-5N9G7 19.2
GTEX-14A5H-1626-SM-5SIAN 19.2
GTEX-117XS-2226-SM-5GIE1 19.1
GTEX-XXEK-1826-SM-4BRVC 18.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 5.2
Samples: 196

Max RPKM: 33.8
Min RPKM: 0.3
Std RPKM: 5.2
Median RPKM: 3.1
GTEX-XAJ8-0426-SM-47JYJ 33.8
GTEX-147JS-2526-SM-5S2Q8 25.4
GTEX-11GSP-1626-SM-5986N 23.2
GTEX-11WQK-2126-SM-5EQME 22.0
GTEX-12ZZZ-2426-SM-5GCNN 16.2
GTEX-11TUW-2026-SM-5EQL8 15.7
GTEX-13FHP-2426-SM-5KLZ5 14.7
GTEX-14BMV-2426-SM-5S2PP 14.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3.6
FF:10014-101C5 62,83,84 years, mixed 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.