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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:43.6RPKM
FANTOM5:199.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody CAB018751

 

Antibody CAB034411

 

Glial cells

Low   Low  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

43.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 43.6
Samples: 117

Max RPKM: 62.2
Min RPKM: 19.9
Std RPKM: 8.8
Median RPKM: 45.2
GTEX-12WSA-0011-R5b-SM-5GU5I 62.2
GTEX-132Q8-0011-R5a-SM-5IJDM 61.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 59.9
GTEX-X585-0011-R5A-SM-46MVI 59.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 58.5
GTEX-139TT-0011-R5b-SM-5K7W8 55.5
GTEX-13X6K-0011-R5b-SM-5PNUE 55.5
GTEX-ZUA1-0011-R5b-SM-51MTG 55.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 55.2
GTEX-T6MN-0011-R5A-SM-32QPD 54.8
GTEX-WL46-0011-R5A-SM-3LK6V 54.8
GTEX-13NYS-0011-R5a-SM-5MR4D 54.1
GTEX-13G51-0011-R5a-SM-5L3EB 53.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 53.9
GTEX-13NYB-0011-R5a-SM-5MR45 53.8
GTEX-12WSC-0011-R5b-SM-5CVNS 53.6
GTEX-QVJO-0011-R5A-SM-2S1QM 53.5
GTEX-11H98-0011-R5b-SM-57WCF 53.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 53.1
GTEX-13FXS-0011-R5b-SM-5LZYE 52.7
GTEX-OHPN-0011-R5A-SM-2I5FF 52.5
GTEX-WVLH-0011-R5A-SM-3MJFW 51.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 51.1
GTEX-14BIM-0011-R5b-SM-5S2RM 51.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 50.4
GTEX-N7MT-0011-R5a-SM-2I3G6 50.3
GTEX-RU72-0011-R5A-SM-2TF6U 49.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 49.8
GTEX-1399T-0011-R5b-SM-5IJDK 49.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 49.0
GTEX-13JUV-0011-R5a-SM-5LZY5 49.0
GTEX-N7MS-0011-R5a-SM-2HMK8 48.9
GTEX-13VXU-0011-R5a-SM-5O9D7 48.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 48.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 48.5
GTEX-13OW6-0011-R5a-SM-5O9BK 48.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 48.5
GTEX-13O3O-0011-R5b-SM-5KM44 48.3
GTEX-WWYW-0011-R5A-SM-3NB3E 48.1
GTEX-13OW5-0011-R5b-SM-5L3FR 47.8
GTEX-NL4W-0011-R5a-SM-2I3GD 47.4
GTEX-X4XX-0011-R5A-SM-46MWN 47.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 47.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 47.0
GTEX-131YS-0011-R5b-SM-5K7YB 46.8
GTEX-12WSB-0011-R5b-SM-5GU67 46.7
GTEX-13S7M-0011-R5b-SM-5P9HS 46.7
GTEX-145MH-0011-R5a-SM-5P9JT 46.7
GTEX-P44H-0011-R5A-SM-2XCEX 46.6
GTEX-13OVH-0011-R5b-SM-5KM4L 46.5
GTEX-13CZV-0011-R5a-SM-5K7XA 46.4
GTEX-11NV4-0011-R5a-SM-5NQ88 46.3
GTEX-11OF3-0011-R5a-SM-57WB4 46.2
GTEX-T5JC-0011-R5A-SM-32PLK 46.2
GTEX-1313W-0011-R5b-SM-5L3EP 46.0
GTEX-13X6I-0011-R5a-SM-5PNWW 45.9
GTEX-TSE9-0011-R5A-SM-3DB7J 45.8
GTEX-13FLW-0011-R5a-SM-5LZX6 45.3
GTEX-RVPV-0011-R5A-SM-2TF69 45.2
GTEX-13FLV-0011-R5a-SM-5LZWT 45.0
GTEX-11GSP-0011-R5a-SM-57WBE 44.8
GTEX-R55E-0011-R5A-SM-2TC5N 44.7
GTEX-WZTO-0011-R5B-SM-3NMC5 44.1
GTEX-13SLX-0011-R5a-SM-5O9BV 43.9
GTEX-12WSF-0011-R5a-SM-5HL8K 43.7
GTEX-RVPU-0011-R5A-SM-2XCAD 43.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 43.4
GTEX-145LS-0011-R5a-SM-5SI65 43.4
GTEX-13OVL-0011-R5b-SM-5L3FU 42.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 42.8
GTEX-139T8-0011-R5b-SM-5J1MO 42.7
GTEX-13OW7-0011-R5b-SM-5O9DM 42.7
GTEX-13X6J-0011-R5b-SM-5PNWT 42.7
GTEX-XOTO-0011-R5A-SM-4B657 42.7
GTEX-14ABY-0011-R5b-SM-5SI7B 42.6
GTEX-Z93S-0011-R5b-SM-4RGNI 42.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 40.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 39.8
GTEX-144GO-0011-R5a-SM-5PNUR 39.8
GTEX-12WSD-0011-R5b-SM-5CVNG 39.7
GTEX-S7SE-0011-R5A-SM-2XCDA 39.6
GTEX-X261-0011-R5A-SM-3NMB4 39.4
GTEX-13JVG-0011-R5a-SM-5MR4O 39.1
GTEX-ZXG5-0011-R5b-SM-57WBN 39.1
GTEX-ZE7O-0011-R5a-SM-57WBO 38.6
GTEX-QMR6-0011-R5A-SM-32PKT 38.4
GTEX-12WSH-0011-R5b-SM-5P9F3 38.0
GTEX-YFC4-0011-R5a-SM-4RGLR 37.9
GTEX-12ZZX-0011-R5a-SM-5HL89 37.2
GTEX-13CIG-0011-R5b-SM-5L3F2 37.2
GTEX-NL3H-0011-R5a-SM-2I3GB 37.2
GTEX-UTHO-0011-R5A-SM-3GIJD 37.0
GTEX-XMD1-0011-R5A-SM-4AT47 36.7
GTEX-NPJ7-0011-R5a-SM-33HBK 36.1
GTEX-YJ89-0011-R5a-SM-4V6GM 35.7
GTEX-T2IS-0011-R5A-SM-32QP4 34.2
GTEX-144GL-0011-R5b-SM-5PNUJ 33.7
GTEX-PVOW-0011-R5A-SM-32PL7 33.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 33.6
GTEX-11WQC-0011-R5a-SM-5BC74 32.6
GTEX-13FHP-0011-R5b-SM-5LZY2 32.3
GTEX-14BIN-0011-R5b-SM-5SI78 32.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 31.8
GTEX-11UD1-0011-R5b-SM-5P9FP 31.6
GTEX-ZV68-0011-R5a-SM-4YCDW 31.6
GTEX-OXRN-0011-R5A-SM-2I5EF 31.4
GTEX-1445S-0011-R5a-SM-5PNUS 31.3
GTEX-ZVT3-0011-R5a-SM-51MSI 30.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 30.1
GTEX-13112-0011-R5b-SM-5DUV8 28.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.0
GTEX-139TS-0011-R5b-SM-5J2MZ 27.3
GTEX-13CF2-0011-R5a-SM-5LZWS 27.0
GTEX-1477Z-0011-R5b-SM-5PNUO 24.9
GTEX-S7PM-0011-R5A-SM-3NM8G 23.8
GTEX-145MG-0011-R5b-SM-5S2VU 23.4
GTEX-13NZA-0011-R5b-SM-5KM4K 19.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

199.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 199.1
FF:10379-105H1 89 years, female 206.3
FF:10164-103B2 76 years, female 191.9

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