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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.0TPM
GTEx:62.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody CAB018751

 

Antibody CAB034411

 

Endothelial cells

Not detected   Low  

Glial cells

Medium   Low  

Neuronal cells

Medium   Medium  

Neuropil

Low   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

32.0

N/A Male, age 5
Sample 1
TPM: 29.8
overview Female, age 40
Sample 2
TPM: 34.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 31.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

62.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 65.6
Samples: 114

Max RPKM: 89.6
Min RPKM: 41.1
Std RPKM: 9.5
Median RPKM: 65.9
GTEX-ZZPT-3026-SM-5GZXH 89.6
GTEX-13OW8-2826-SM-5L3GC 83.5
GTEX-X585-3026-SM-46MWF 81.9
GTEX-QVJO-1426-SM-2S1QY 81.7
GTEX-T5JC-2426-SM-3NMDB 81.2
GTEX-WVLH-3026-SM-3MJG9 81.1
GTEX-13VXU-2926-SM-5LU5C 80.0
GTEX-WL46-2926-SM-3LK82 79.9
GTEX-145MG-3026-SM-5RQJA 79.2
GTEX-X4XX-3026-SM-3NMB2 78.2
GTEX-12ZZW-2926-SM-5LZUP 78.0
GTEX-T6MN-2626-SM-32PMQ 77.7
GTEX-1117F-3226-SM-5N9CT 77.4
GTEX-117XS-3026-SM-5N9CA 76.7
GTEX-ZVT3-3026-SM-5E43N 76.6
GTEX-XLM4-3026-SM-4AT6L 75.8
GTEX-11GS4-3126-SM-5A5LH 75.6
GTEX-14BMV-3026-SM-5S2PQ 75.6
GTEX-13FHO-3026-SM-5J1O9 75.2
GTEX-13OW6-3026-SM-5J2MI 75.0
GTEX-13FXS-3126-SM-5J2NN 74.9
GTEX-13NYB-3026-SM-5IJD7 74.7
GTEX-13FLW-1426-SM-5K7YE 74.2
GTEX-12ZZY-3026-SM-5GCOU 73.8
GTEX-NPJ8-1526-SM-2D7VU 73.3
GTEX-YJ89-3026-SM-5IFJI 73.1
GTEX-Z93S-2926-SM-57WB9 72.8
GTEX-11OF3-2926-SM-5HL78 72.6
GTEX-11ONC-2926-SM-5P9JM 72.3
GTEX-1313W-3126-SM-5LZUI 72.2
GTEX-13QIC-2926-SM-5J2NF 72.0
GTEX-13SLX-3126-SM-5S2Q5 72.0
GTEX-1192X-3126-SM-5N9BY 71.8
GTEX-13NYS-3126-SM-5KLYV 71.4
GTEX-11GSO-2926-SM-5HL73 71.3
GTEX-WWYW-3126-SM-3NB39 71.1
GTEX-12WSC-3026-SM-5GCNF 70.6
GTEX-RNOR-2326-SM-2TF4I 70.5
GTEX-12126-1026-SM-5P9JJ 70.2
GTEX-ZAJG-3126-SM-5HL9J 69.7
GTEX-QVUS-2826-SM-3GADB 69.0
GTEX-14ASI-3026-SM-5S2PN 68.8
GTEX-12ZZX-2926-SM-5GCOQ 68.7
GTEX-Q2AG-2926-SM-2HMJ3 68.4
GTEX-ZYFD-3026-SM-5E44C 68.4
GTEX-11DXW-1126-SM-5H12Q 67.8
GTEX-OXRN-2426-SM-2I5EQ 67.8
GTEX-NPJ7-2726-SM-2I3FT 67.7
GTEX-145LS-3126-SM-5Q5BY 67.6
GTEX-13O3O-3126-SM-5KM3H 67.3
GTEX-145MF-2726-SM-5O995 67.2
GTEX-YFC4-3126-SM-5PNV6 67.1
GTEX-11DXY-3226-SM-5GIDE 66.9
GTEX-132Q8-3026-SM-5PNVG 66.7
GTEX-R55F-1326-SM-5S2V4 66.7
GTEX-13OVH-3026-SM-5MR4N 66.2
GTEX-13S7M-3126-SM-5RQJQ 66.2
GTEX-144GL-3026-SM-5Q5CW 65.7
GTEX-ZAK1-3026-SM-5S2MJ 65.7
GTEX-131YS-3126-SM-5KLYT 65.5
GTEX-WHSE-3026-SM-3P5ZH 65.5
GTEX-13FHP-3026-SM-5IJBS 65.1
GTEX-144FL-3026-SM-5O99C 65.0
GTEX-12WSH-3026-SM-5CVNI 64.3
GTEX-ZUA1-3026-SM-59HJC 64.3
GTEX-1128S-2726-SM-5H12C 64.1
GTEX-XOTO-3026-SM-4B65M 64.1
GTEX-13NYC-2826-SM-5K7WR 64.0
GTEX-WZTO-2926-SM-3NM9I 64.0
GTEX-13O3Q-2926-SM-5KM45 63.7
GTEX-1399T-3026-SM-5KLZC 62.8
GTEX-12ZZZ-3026-SM-5BC67 62.5
GTEX-Y111-2726-SM-4TT3N 62.5
GTEX-13PL6-3126-SM-5LUAR 62.3
GTEX-11OC5-0726-SM-5P9JK 62.2
GTEX-11WQK-3026-SM-5EQL6 62.2
GTEX-145MH-3026-SM-5Q5DZ 61.3
GTEX-Y8DK-0826-SM-4TT3T 60.2
GTEX-13G51-3026-SM-5IJB8 60.1
GTEX-11NUK-2926-SM-5A5MD 60.0
GTEX-12WSD-3126-SM-5HL7P 59.9
GTEX-11PRG-2926-SM-5987A 59.8
GTEX-N7MT-1126-SM-5SI7V 59.8
GTEX-QMR6-1426-SM-32PLA 59.8
GTEX-RU72-3026-SM-5SI7Y 59.6
GTEX-UTHO-3026-SM-3GAFB 59.2
GTEX-11EMC-3226-SM-5EGKW 58.6
GTEX-111FC-3126-SM-5GZZ2 58.4
GTEX-139T8-1026-SM-5J2MC 58.4
GTEX-ZE7O-3126-SM-5HL5X 58.3
GTEX-QDT8-2926-SM-32PKC 57.8
GTEX-11EI6-3026-SM-5GZZO 57.6
GTEX-14A5I-2926-SM-5Q5CQ 57.0
GTEX-13OVJ-2826-SM-5L3GW 56.9
GTEX-11ZUS-2926-SM-5FQSL 56.4
GTEX-T2IS-3026-SM-32QPM 56.2
GTEX-TSE9-3026-SM-3DB76 56.2
GTEX-1445S-3026-SM-5O9BR 55.8
GTEX-13OW7-3026-SM-5L3GY 55.5
GTEX-13PVQ-3026-SM-5SI93 55.5
GTEX-11O72-2926-SM-5BC4V 55.1
GTEX-131XW-3126-SM-5LZUC 54.2
GTEX-12WSA-2926-SM-5EQ4D 52.6
GTEX-13IVO-2926-SM-5L3CZ 52.3
GTEX-PVOW-2526-SM-2XCF7 51.4
GTEX-13X6J-3026-SM-5Q5CU 51.3
GTEX-11TTK-2926-SM-5PNYP 50.4
GTEX-13JVG-3126-SM-5L3FH 48.7
GTEX-11GSP-3226-SM-5986O 48.5
GTEX-13JUV-2926-SM-5LZX7 47.2
GTEX-147GR-3026-SM-5S2ML 47.1
GTEX-13X6K-2926-SM-5Q5D5 44.3
GTEX-PWO3-0926-SM-2I5EY 42.4
GTEX-11NV4-2126-SM-5N9DS 41.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 58.5
Samples: 108

Max RPKM: 94.2
Min RPKM: 32
Std RPKM: 10.4
Median RPKM: 58.7
GTEX-13NYS-0011-R10a-SM-5MR4S 94.2
GTEX-13N1W-0011-R10b-SM-5MR4H 80.7
GTEX-13O3O-0011-R10a-SM-5LUA9 80.0
GTEX-13CZV-0011-R10b-SM-5LZYD 74.2
GTEX-NL3H-0011-R10A-SM-2I3E9 73.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 73.3
GTEX-X4EP-0011-R10B-SM-4QASJ 73.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 73.0
GTEX-13OW6-0011-R10a-SM-5L3HE 72.3
GTEX-145MG-0011-R10a-SM-5PNWG 71.5
GTEX-X585-0011-R10A-SM-46MUY 71.4
GTEX-13SLX-0011-R10a-SM-5P9HV 71.2
GTEX-12WSH-0011-R10a-SM-5LZUS 69.5
GTEX-RVPU-0011-R10A-SM-2XCAH 69.2
GTEX-12WSF-0011-R10a-SM-5LZVH 68.6
GTEX-X4XX-0011-R10B-SM-46MWO 68.5
GTEX-13OW7-0011-R10a-SM-5L3H3 68.2
GTEX-14BIL-0011-R10a-SM-5SI75 68.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 67.6
GTEX-13QIC-0011-R10a-SM-5O9C7 67.4
GTEX-12WSD-0011-R10b-SM-5GU79 67.3
GTEX-T6MN-0011-R10A-SM-32QP7 67.1
GTEX-12WSA-0011-R10b-SM-5P9ET 67.0
GTEX-N7MT-0011-R10A-SM-2I3E1 66.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 65.7
GTEX-13S7M-0011-R10b-SM-5PNZB 65.6
GTEX-12WSC-0011-R10a-SM-5GU57 65.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 65.4
GTEX-13FHO-0011-R10b-SM-5J2MM 64.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 64.8
GTEX-13X6K-0011-R10a-SM-5P9JR 64.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 64.6
GTEX-11H98-0011-R10b-SM-5NQ98 64.0
GTEX-13O3Q-0011-R10b-SM-5KM39 63.9
GTEX-145LU-0011-R10a-SM-5PNWJ 63.4
GTEX-YJ89-0011-R10a-SM-4SOK9 63.4
GTEX-XLM4-0011-R10A-SM-4AT5P 63.0
GTEX-13FLW-0011-R10b-SM-5LZZF 62.6
GTEX-13FXS-0011-R10a-SM-5J2MA 62.6
GTEX-147GR-0011-R10b-SM-5S2UM 62.6
GTEX-WVLH-0011-R10A-SM-3MJFM 62.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 62.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 61.9
GTEX-131XH-0011-R10a-SM-5EGLJ 61.6
GTEX-YFC4-0011-R10a-SM-4SOK5 61.5
GTEX-ZVT3-0011-R10b-SM-57WB6 61.5
GTEX-12WSE-0011-R10b-SM-5P9JV 61.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 60.9
GTEX-ZF28-0011-R10a-SM-4WWEH 60.9
GTEX-14BIN-0011-R10a-SM-5S2UA 60.6
GTEX-1313W-0011-R10b-SM-5DUXA 59.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 59.3
GTEX-N7MS-0011-R10A-SM-2HMJK 59.2
GTEX-13QJC-0011-R10a-SM-5SI63 59.1
GTEX-WWYW-0011-R10A-SM-3NB35 58.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 58.1
GTEX-T5JC-0011-R10A-SM-32PM2 57.9
GTEX-X261-0011-R10B-SM-4E3JT 57.8
GTEX-13SLW-0011-R10a-SM-5S2UI 57.6
GTEX-13N2G-0011-R10a-SM-5MR34 57.3
GTEX-145LS-0011-R10a-SM-5PNUQ 57.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 57.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 57.0
GTEX-WL46-0011-R10A-SM-3MJFQ 56.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 56.4
GTEX-OXRN-0011-R10A-SM-2I5GC 56.4
GTEX-Z93S-0011-R10a-SM-4RGNM 56.3
GTEX-13X6J-0011-R10b-SM-5PNWA 56.2
GTEX-145MH-0011-R10b-SM-5PNUK 56.1
GTEX-11WQC-0011-R10a-SM-57WCT 55.8
GTEX-S7SE-0011-R10A-SM-2XCDF 55.5
GTEX-147F4-0011-R10b-SM-5S2WC 55.3
GTEX-13NYB-0011-R10a-SM-5KM43 55.2
GTEX-13X6I-0011-R10a-SM-5PNWI 55.2
GTEX-131YS-0011-R10b-SM-5EQ5N 55.0
GTEX-13OVL-0011-R10a-SM-5L3GS 54.8
GTEX-12WSM-0011-R10a-SM-5DUWV 53.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 53.6
GTEX-P44H-0011-R10A-SM-2XCEK 52.8
GTEX-WZTO-0011-R10B-SM-4E3KB 52.8
GTEX-XMD1-0011-R10A-SM-4AT4A 52.7
GTEX-QMR6-0011-R10A-SM-32PKO 52.3
GTEX-13OW8-0011-R10a-SM-5L3H6 52.2
GTEX-13JUV-0011-R10b-SM-5LZXR 51.6
GTEX-11WQK-0011-R10a-SM-5BC6R 49.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 48.3
GTEX-NL4W-0011-R10A-SM-2I3DY 48.3
GTEX-ZUA1-0011-R10a-SM-51MT6 48.3
GTEX-TSE9-0011-R10A-SM-3DB7O 48.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 47.3
GTEX-131XW-0011-R10a-SM-5DUVA 46.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 46.6
GTEX-13G51-0011-R10b-SM-5LZYF 46.5
GTEX-13IVO-0011-R10a-SM-5LZY3 46.1
GTEX-1477Z-0011-R10b-SM-5S2RF 45.6
GTEX-ZV68-0011-R10a-SM-51MT7 44.2
GTEX-QVUS-0011-R10A-SM-3GIK3 44.1
GTEX-1445S-0011-R10a-SM-5PNWB 43.7
GTEX-13NZA-0011-R10b-SM-5KM54 43.6
GTEX-12126-0011-R10b-SM-5BC6T 42.5
GTEX-OXRO-0011-R10A-SM-2I5EH 41.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 41.6
GTEX-QDT8-0011-R10A-SM-32PKG 41.4
GTEX-139TS-0011-R10a-SM-5K7TU 40.6
GTEX-14753-0011-R10b-SM-5S2WE 39.2
GTEX-13JVG-0011-R10b-SM-5KM2P 37.8
GTEX-ZXG5-0011-R10a-SM-57WDD 37.6
GTEX-11ZUS-0011-R10b-SM-5BC79 32.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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