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VPS4A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.4TPM
GTEx:44.2RPKM
FANTOM5:123.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB018751

  

Antibody CAB034411

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

13.4
overview Male, age 54
Sample 1
TPM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 11.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 15.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 13.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 14.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 14.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 11.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 15.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 16.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 10.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

44.2

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 47.6
Samples: 149

Max RPKM: 75.9
Min RPKM: 32.7
Std RPKM: 7
Median RPKM: 46.9
GTEX-14E6C-2226-SM-5QGQG 75.9
GTEX-11TUW-2326-SM-5EQMO 71.6
GTEX-13PL7-2426-SM-5J2N3 67.3
GTEX-1477Z-2126-SM-5Q5CM 64.6
GTEX-13O1R-2426-SM-5KLZZ 62.4
GTEX-ZTTD-2626-SM-57WEX 61.7
GTEX-1339X-1726-SM-5P9J9 59.9
GTEX-13PVQ-2726-SM-5L3H7 59.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 41.7
Samples: 196

Max RPKM: 67.6
Min RPKM: 20.8
Std RPKM: 5.4
Median RPKM: 41
GTEX-11WQK-2126-SM-5EQME 67.6
GTEX-11TUW-2026-SM-5EQL8 63.1
GTEX-1399R-2226-SM-5P9JB 61.3
GTEX-WQUQ-2526-SM-4MVNO 54.3
GTEX-13U4I-2426-SM-5LU34 53.5
GTEX-V955-1626-SM-4JBHJ 53.1
GTEX-X5EB-0926-SM-46MVT 52.7
GTEX-148VJ-2626-SM-5QGPI 52.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

123.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 123.4
FF:10014-101C5 62,83,84 years, mixed 123.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.