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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:77.4RPKM
FANTOM5:335.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA048531

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

77.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 77.4
Samples: 117

Max RPKM: 184.4
Min RPKM: 19.7
Std RPKM: 27
Median RPKM: 73.5
GTEX-X4XX-0011-R5A-SM-46MWN 184.4
GTEX-144GO-0011-R5a-SM-5PNUR 181.7
GTEX-XMD1-0011-R5A-SM-4AT47 160.3
GTEX-13JVG-0011-R5a-SM-5MR4O 132.5
GTEX-NL4W-0011-R5a-SM-2I3GD 132.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 130.8
GTEX-T5JC-0011-R5A-SM-32PLK 127.5
GTEX-11GSP-0011-R5a-SM-57WBE 120.4
GTEX-NL3H-0011-R5a-SM-2I3GB 116.5
GTEX-13OW6-0011-R5a-SM-5O9BK 111.6
GTEX-1445S-0011-R5a-SM-5PNUS 107.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 106.9
GTEX-RVPV-0011-R5A-SM-2TF69 106.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 103.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 103.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 101.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 99.8
GTEX-13CIG-0011-R5b-SM-5L3F2 99.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 98.9
GTEX-13OW5-0011-R5b-SM-5L3FR 98.2
GTEX-11UD1-0011-R5b-SM-5P9FP 96.5
GTEX-R55E-0011-R5A-SM-2TC5N 96.3
GTEX-13OVL-0011-R5b-SM-5L3FU 96.2
GTEX-13NYS-0011-R5a-SM-5MR4D 94.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 92.8
GTEX-13JUV-0011-R5a-SM-5LZY5 92.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 90.9
GTEX-12WSA-0011-R5b-SM-5GU5I 90.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 90.2
GTEX-ZXG5-0011-R5b-SM-57WBN 89.9
GTEX-12WSB-0011-R5b-SM-5GU67 89.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 89.5
GTEX-13X6I-0011-R5a-SM-5PNWW 87.8
GTEX-ZE7O-0011-R5a-SM-57WBO 87.1
GTEX-T6MN-0011-R5A-SM-32QPD 86.4
GTEX-13FLW-0011-R5a-SM-5LZX6 86.1
GTEX-13OW7-0011-R5b-SM-5O9DM 84.8
GTEX-13SLX-0011-R5a-SM-5O9BV 84.7
GTEX-12WSD-0011-R5b-SM-5CVNG 84.2
GTEX-11H98-0011-R5b-SM-57WCF 83.6
GTEX-11OF3-0011-R5a-SM-57WB4 83.6
GTEX-S7SE-0011-R5A-SM-2XCDA 83.4
GTEX-139TS-0011-R5b-SM-5J2MZ 82.5
GTEX-11WQC-0011-R5a-SM-5BC74 81.7
GTEX-RU72-0011-R5A-SM-2TF6U 81.0
GTEX-139TT-0011-R5b-SM-5K7W8 80.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 79.8
GTEX-131YS-0011-R5b-SM-5K7YB 79.6
GTEX-12ZZX-0011-R5a-SM-5HL89 78.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 78.1
GTEX-13112-0011-R5b-SM-5DUV8 77.9
GTEX-ZVT3-0011-R5a-SM-51MSI 77.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 77.6
GTEX-14ABY-0011-R5b-SM-5SI7B 77.2
GTEX-X261-0011-R5A-SM-3NMB4 77.1
GTEX-YFC4-0011-R5a-SM-4RGLR 76.7
GTEX-XOTO-0011-R5A-SM-4B657 75.5
GTEX-13FLV-0011-R5a-SM-5LZWT 75.1
GTEX-13VXU-0011-R5a-SM-5O9D7 73.5
GTEX-12WSH-0011-R5b-SM-5P9F3 72.4
GTEX-WVLH-0011-R5A-SM-3MJFW 72.0
GTEX-ZV68-0011-R5a-SM-4YCDW 71.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 71.6
GTEX-13FHP-0011-R5b-SM-5LZY2 71.4
GTEX-WZTO-0011-R5B-SM-3NMC5 71.4
GTEX-13X6J-0011-R5b-SM-5PNWT 71.1
GTEX-OXRN-0011-R5A-SM-2I5EF 69.8
GTEX-13G51-0011-R5a-SM-5L3EB 69.4
GTEX-QVJO-0011-R5A-SM-2S1QM 69.3
GTEX-13OVH-0011-R5b-SM-5KM4L 69.0
GTEX-145LS-0011-R5a-SM-5SI65 68.9
GTEX-N7MT-0011-R5a-SM-2I3G6 68.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 67.8
GTEX-N7MS-0011-R5a-SM-2HMK8 66.9
GTEX-13NYB-0011-R5a-SM-5MR45 66.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 66.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 65.2
GTEX-13FXS-0011-R5b-SM-5LZYE 65.2
GTEX-144GL-0011-R5b-SM-5PNUJ 64.6
GTEX-S7PM-0011-R5A-SM-3NM8G 63.7
GTEX-13S7M-0011-R5b-SM-5P9HS 63.5
GTEX-12WSC-0011-R5b-SM-5CVNS 63.4
GTEX-YJ89-0011-R5a-SM-4V6GM 62.8
GTEX-145MH-0011-R5a-SM-5P9JT 62.4
GTEX-11NV4-0011-R5a-SM-5NQ88 61.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 61.4
GTEX-X585-0011-R5A-SM-46MVI 60.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60.5
GTEX-14BIM-0011-R5b-SM-5S2RM 59.6
GTEX-Z93S-0011-R5b-SM-4RGNI 59.0
GTEX-WL46-0011-R5A-SM-3LK6V 58.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 57.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 57.8
GTEX-13CF2-0011-R5a-SM-5LZWS 57.2
GTEX-13NZA-0011-R5b-SM-5KM4K 57.0
GTEX-145MG-0011-R5b-SM-5S2VU 56.4
GTEX-OHPN-0011-R5A-SM-2I5FF 56.4
GTEX-14BIN-0011-R5b-SM-5SI78 56.3
GTEX-1477Z-0011-R5b-SM-5PNUO 55.9
GTEX-1313W-0011-R5b-SM-5L3EP 53.3
GTEX-13O3O-0011-R5b-SM-5KM44 53.1
GTEX-UTHO-0011-R5A-SM-3GIJD 53.1
GTEX-ZUA1-0011-R5b-SM-51MTG 52.3
GTEX-NPJ7-0011-R5a-SM-33HBK 52.1
GTEX-1399T-0011-R5b-SM-5IJDK 51.2
GTEX-WWYW-0011-R5A-SM-3NB3E 47.7
GTEX-132Q8-0011-R5a-SM-5IJDM 46.2
GTEX-RVPU-0011-R5A-SM-2XCAD 46.0
GTEX-PVOW-0011-R5A-SM-32PL7 41.7
GTEX-13X6K-0011-R5b-SM-5PNUE 41.6
GTEX-P44H-0011-R5A-SM-2XCEX 39.1
GTEX-139T8-0011-R5b-SM-5J1MO 37.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 37.5
GTEX-QMR6-0011-R5A-SM-32PKT 34.5
GTEX-TSE9-0011-R5A-SM-3DB7J 33.3
GTEX-12WSF-0011-R5a-SM-5HL8K 33.0
GTEX-T2IS-0011-R5A-SM-32QP4 19.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

335.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 335.6
FF:10164-103B2 76 years, female 406.9
FF:10379-105H1 89 years, female 264.3

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