Tissue expression of PTPRA - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	51.0	TPM
GTEx:	16.7	RPKM
FANTOM5:	59.6	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA029412	Antibody CAB034366
Squamous epithelial cells	Medium	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	51.0

Female, age 70

Sample 1
TPM: 49.9

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 52.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 50.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	16.7

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 16.7

Samples: 286

Max RPKM: 24.1
Min RPKM: 9
Std RPKM: 2.3
Median RPKM: 16.6

GTEX-ZZPT-1426-SM-5N9C5

24.1

GTEX-12WSA-1426-SM-5EGJU

23.7

GTEX-P4QS-0626-SM-3NMD1

22.8

GTEX-1399U-1026-SM-5J1OC

21.8

GTEX-P4PP-0626-SM-3NM9X

21.8

GTEX-ZAB4-1126-SM-5HL86

21.8

GTEX-144GO-2726-SM-5O9A2

21.5

GTEX-OIZI-1426-SM-3NB1T

21.4

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	59.6

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 59.6

FF:10015-101C6

68,74,75 years, mixed

59.6