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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.8TPM
GTEx:23.8RPKM
FANTOM5:25.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:High
 
 

Antibody staining

Antibody HPA007007

 

Antibody HPA026111

 

Antibody CAB005889

 

Antibody CAB058692

 

Adipocytes

Not detected   Not detected   Low  

Glandular cells

Not detected   Not detected   Medium   Not detected  

Myoepithelial cells

High   High   Medium   High  
          
       
       
       

BREAST - HPA RNA-seq

Average TPM

22.8

overview Female, age 52
Sample 1
TPM: 18.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 16.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 15.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 40.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

23.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 23.8
Samples: 214

Max RPKM: 76.8
Min RPKM: 6.1
Std RPKM: 11.8
Median RPKM: 20.7
GTEX-WOFL-0826-SM-3MJG1 76.8
GTEX-11P82-1326-SM-5HL62 64.1
GTEX-R55D-0826-SM-48FEA 61.5
GTEX-REY6-2426-SM-48FF5 58.4
GTEX-XUZC-1626-SM-4BRVP 57.0
GTEX-11DXY-2326-SM-5GICW 51.9
GTEX-11DZ1-0326-SM-5N9BN 51.8
GTEX-1117F-2826-SM-5GZXL 49.8
GTEX-Y8E4-1626-SM-5S2MW 49.8
GTEX-UTHO-1026-SM-3GAF7 49.3
GTEX-QVJO-1826-SM-447C9 47.8
GTEX-11O72-2126-SM-5N9FO 47.2
GTEX-T5JW-2026-SM-4DM63 46.4
GTEX-S7SE-0826-SM-4AT4D 46.3
GTEX-YFCO-1826-SM-4W1YH 45.2
GTEX-145MO-0826-SM-5NQBL 44.8
GTEX-14E6E-1326-SM-5S2NR 44.4
GTEX-UPK5-2326-SM-3P5Z8 44.0
GTEX-WRHU-0326-SM-3MJFY 44.0
GTEX-11OF3-1926-SM-59889 41.5
GTEX-11DXW-0626-SM-5N9ER 41.4
GTEX-131YS-0626-SM-5EGKL 41.4
GTEX-U3ZH-1426-SM-4DXSR 40.9
GTEX-S32W-2026-SM-4AD6E 39.0
GTEX-ZA64-1526-SM-5CVMD 39.0
GTEX-1314G-1226-SM-5BC6D 38.8
GTEX-12WSM-1726-SM-5BC6J 38.1
GTEX-13OW8-0226-SM-5K7UP 37.6
GTEX-11NSD-0926-SM-5N9DR 37.4
GTEX-XGQ4-0926-SM-4AT4U 37.3
GTEX-ZYFC-0826-SM-5E44K 37.3
GTEX-YJ8O-2226-SM-5IFHW 37.2
GTEX-X15G-1626-SM-3NMB3 35.9
GTEX-147F4-2826-SM-5NQBN 35.1
GTEX-12ZZX-1126-SM-5EGKB 35.0
GTEX-TML8-1226-SM-32QON 34.8
GTEX-YB5E-1726-SM-5IFJ3 34.7
GTEX-11EI6-0626-SM-5985T 33.7
GTEX-SE5C-2126-SM-4BRUJ 32.7
GTEX-ZDTT-2126-SM-5S2OJ 32.1
GTEX-XQ8I-2426-SM-4WAXY 32.0
GTEX-ZU9S-1926-SM-5NQBP 31.7
GTEX-1192X-2326-SM-5987X 31.6
GTEX-T2YK-2226-SM-32QPT 31.6
GTEX-145MN-1926-SM-5SIAI 31.5
GTEX-WY7C-2726-SM-3NB3P 31.4
GTEX-ZT9W-2026-SM-51MRA 30.8
GTEX-ZUA1-1526-SM-59HLS 30.2
GTEX-ZYT6-0126-SM-5E45J 29.8
GTEX-XMD2-0926-SM-4WWEF 29.7
GTEX-12WSB-0626-SM-59HJO 29.6
GTEX-ZLV1-1426-SM-4WWES 29.3
GTEX-13CF2-2026-SM-5K7VI 28.9
GTEX-RWS6-1926-SM-47JXY 28.9
GTEX-ZQG8-0726-SM-5P9H9 28.7
GTEX-13W3W-1226-SM-5LU4H 28.3
GTEX-RU72-0626-SM-46MUI 28.3
GTEX-ZF2S-2026-SM-5E461 27.7
GTEX-PSDG-1626-SM-48TCQ 27.6
GTEX-XV7Q-2326-SM-4BRVZ 27.6
GTEX-Y111-2026-SM-4SOJA 27.4
GTEX-13O3Q-2226-SM-5KM4O 27.1
GTEX-S4UY-0726-SM-4AD6X 26.9
GTEX-12KS4-0126-SM-5Q5A5 26.7
GTEX-Q2AG-0326-SM-48U1O 26.7
GTEX-11ZUS-0826-SM-5FQUY 26.4
GTEX-11GS4-2126-SM-5A5KR 26.3
GTEX-R53T-1526-SM-48FEK 26.2
GTEX-YFC4-1426-SM-5IFJG 26.1
GTEX-XYKS-1326-SM-4BRUN 25.9
GTEX-132AR-0826-SM-5EGK6 25.6
GTEX-WYVS-1726-SM-3NMAY 25.0
GTEX-ZF3C-2326-SM-5S2MZ 25.0
GTEX-ZV7C-1826-SM-5NQ83 25.0
GTEX-XOT4-0726-SM-4GIAW 24.9
GTEX-XQ3S-1326-SM-4BOPQ 24.8
GTEX-13FTX-1126-SM-5N9EN 24.6
GTEX-ZEX8-2226-SM-57WC6 24.5
GTEX-S33H-0326-SM-4AD6N 24.4
GTEX-YEC3-1026-SM-5IFI5 24.3
GTEX-139T6-1626-SM-5PNYZ 24.1
GTEX-UJHI-1426-SM-3DB9C 23.9
GTEX-133LE-1726-SM-5K7VQ 23.8
GTEX-11EMC-2026-SM-5A5JV 23.7
GTEX-13OW5-2226-SM-5L3HC 23.7
GTEX-Y5V5-2126-SM-4WWFO 23.1
GTEX-QDT8-0626-SM-48TYW 22.9
GTEX-ZDXO-0126-SM-5S2ND 22.8
GTEX-1122O-1226-SM-5H113 22.7
GTEX-WYJK-1326-SM-3NB2T 22.6
GTEX-11WQK-2426-SM-5GU5C 22.4
GTEX-ZLFU-2126-SM-4WWEV 22.4
GTEX-13O61-1826-SM-5KM4I 22.3
GTEX-XUW1-2326-SM-4BOO5 22.1
GTEX-13N11-1726-SM-5J1OJ 22.0
GTEX-144GL-2026-SM-5LU3O 22.0
GTEX-11DXZ-1926-SM-5GZZL 21.9
GTEX-11NV4-2026-SM-5N9DG 21.8
GTEX-13NZ9-1026-SM-5MR5K 21.8
GTEX-139TU-0626-SM-5KM3X 21.6
GTEX-R3RS-0626-SM-48FE1 21.6
GTEX-13S86-1226-SM-5S2OA 21.2
GTEX-12BJ1-1826-SM-5HL9N 21.1
GTEX-U3ZN-1926-SM-4DXSG 21.0
GTEX-ZVT4-1026-SM-57WC4 20.9
GTEX-13NZ8-0126-SM-5IJCT 20.8
GTEX-11EQ9-1826-SM-5Q5AJ 20.7
GTEX-1269C-2426-SM-5FQSN 20.7
GTEX-ZC5H-2626-SM-5J2MG 20.7
GTEX-T6MN-0726-SM-32PML 20.6
GTEX-ZVZQ-0826-SM-51MRF 20.5
GTEX-11PRG-0826-SM-5EQ6A 20.1
GTEX-13PL6-2926-SM-5L3I2 20.1
GTEX-S4Q7-1126-SM-4AD6R 20.1
GTEX-X261-0626-SM-3NMD9 19.8
GTEX-X4EP-2926-SM-3P5YQ 19.8
GTEX-QEL4-2126-SM-447AE 19.3
GTEX-11LCK-2426-SM-5HL5F 19.2
GTEX-TKQ2-1826-SM-33HB2 19.2
GTEX-VUSG-2226-SM-4KKZO 19.0
GTEX-SIU7-1626-SM-4BRUK 18.8
GTEX-Y3IK-2326-SM-4WWDT 18.7
GTEX-117YX-1426-SM-5H12H 18.6
GTEX-WFON-1826-SM-3GILG 18.6
GTEX-ZAB4-2526-SM-5HL8M 18.6
GTEX-11P81-1926-SM-5BC53 18.5
GTEX-W5X1-2326-SM-3GIL6 18.4
GTEX-ZY6K-1626-SM-5GZWV 18.3
GTEX-1313W-0826-SM-5EQ4T 18.2
GTEX-WYBS-0926-SM-3NM94 18.2
GTEX-ZF29-1926-SM-5S2P1 18.2
GTEX-QMRM-1626-SM-4R1KV 18.1
GTEX-RUSQ-2026-SM-4GIAK 18.0
GTEX-11WQC-1726-SM-5GU4W 17.8
GTEX-WXYG-2226-SM-4E3IM 17.7
GTEX-S341-1526-SM-4AD6K 17.5
GTEX-ZTX8-1226-SM-4YCE9 17.5
GTEX-13QIC-2326-SM-5LU5N 17.4
GTEX-ZV6S-1826-SM-5NQ8D 17.3
GTEX-YB5K-1626-SM-5IFIN 17.1
GTEX-ZDYS-1126-SM-5K7UB 17.1
GTEX-ZTTD-1026-SM-51MRD 17.1
GTEX-T6MO-0326-SM-32QOK 17.0
GTEX-13N1W-0626-SM-5MR4U 16.7
GTEX-ZVTK-0326-SM-51MRR 16.6
GTEX-131XW-0726-SM-5EGK3 16.5
GTEX-12WSN-1326-SM-5GCNT 16.3
GTEX-12WSK-2226-SM-5GCO5 16.0
GTEX-146FH-0826-SM-5SI8T 16.0
GTEX-14753-2426-SM-5LU8U 16.0
GTEX-13FTY-2226-SM-5J1ND 15.9
GTEX-ZXES-0826-SM-5E43C 15.9
GTEX-ZWKS-2826-SM-5NQ74 15.8
GTEX-13O3P-0826-SM-5L3DH 15.7
GTEX-ZZPU-0626-SM-5E43T 15.6
GTEX-TKQ1-0226-SM-33HB5 15.5
GTEX-Y3I4-1526-SM-4TT7K 15.5
GTEX-11ZTT-2326-SM-5EQLG 15.4
GTEX-R55F-1726-SM-2TF4R 15.4
GTEX-T2IS-1526-SM-32QPR 15.3
GTEX-132NY-0826-SM-5K7Y7 15.2
GTEX-13D11-1026-SM-5IJFB 15.2
GTEX-139T8-0826-SM-5L3DE 15.1
GTEX-S4P3-1326-SM-4AD6V 15.1
GTEX-WI4N-1426-SM-3LK7H 15.1
GTEX-ZYWO-2326-SM-5GZY4 15.0
GTEX-13113-1726-SM-5GCOO 14.9
GTEX-Y8LW-1626-SM-5IFHX 14.9
GTEX-13FHO-0826-SM-5L3E8 14.8
GTEX-14AS3-1626-SM-5S2OY 14.7
GTEX-XUJ4-1926-SM-4BOOV 14.7
GTEX-111YS-1926-SM-5GICC 14.4
GTEX-145ME-1526-SM-5Q5F2 14.4
GTEX-13NZB-2126-SM-5MR4Y 14.2
GTEX-ZVE2-1226-SM-5NQ8R 14.2
GTEX-ZYW4-0826-SM-5GIDG 14.2
GTEX-ZQUD-1926-SM-51MSA 13.9
GTEX-ZZ64-1226-SM-5E43R 13.9
GTEX-11EM3-1326-SM-5N9C6 13.6
GTEX-11I78-2226-SM-5PNYA 13.5
GTEX-11P7K-0726-SM-5EGKX 13.4
GTEX-13FTW-1426-SM-5LZWZ 13.4
GTEX-VJWN-0726-SM-3GIJ8 13.3
GTEX-Y114-2026-SM-4TT7L 13.3
GTEX-Y5V6-2126-SM-4WWFX 13.3
GTEX-11GSO-1926-SM-5A5K3 13.1
GTEX-13W46-0826-SM-5LU3H 13.0
GTEX-144GM-0926-SM-5O994 13.0
GTEX-145LT-0726-SM-5S2VM 13.0
GTEX-XMD1-0826-SM-4AT52 13.0
GTEX-11TT1-2126-SM-5GU5Y 12.9
GTEX-X4XY-0926-SM-4E3JD 12.7
GTEX-13O3O-0826-SM-5K7WE 12.5
GTEX-T5JC-2126-SM-32PMO 12.5
GTEX-U8XE-0826-SM-4E3J1 12.4
GTEX-XBED-1626-SM-47JYN 12.3
GTEX-11ONC-2126-SM-5HL6E 12.1
GTEX-TMMY-0726-SM-33HBE 11.8
GTEX-117XS-1926-SM-5GICO 11.5
GTEX-1211K-1926-SM-5EQLB 11.5
GTEX-13PVQ-1026-SM-5KM3M 11.5
GTEX-1399U-1826-SM-5PNZ1 11.3
GTEX-ZAJG-0626-SM-5HL8X 11.0
GTEX-Y9LG-1426-SM-5IFJZ 10.8
GTEX-ZPIC-1126-SM-5BC7F 10.4
GTEX-QEG5-0726-SM-4R1JQ 9.9
GTEX-XMK1-1126-SM-4IHJ8 9.9
GTEX-ZVT2-1826-SM-5NQ8W 9.6
GTEX-14ABY-2126-SM-5QGQZ 9.2
GTEX-13CF3-2126-SM-5IFJP 8.8
GTEX-U412-1826-SM-4DXTJ 8.7
GTEX-11TUW-1826-SM-5BC5D 8.2
GTEX-132Q8-1426-SM-5EGK7 8.2
GTEX-Y5LM-1726-SM-4VDSX 6.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

25.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 25.2
FF:10080-102A8 77 years, female 25.2

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