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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:86.2RPKM
FANTOM5:701.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA064091

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

86.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 86.2
Samples: 117

Max RPKM: 150.1
Min RPKM: 32.5
Std RPKM: 24.1
Median RPKM: 85.9
GTEX-T2IS-0011-R5A-SM-32QP4 150.1
GTEX-131YS-0011-R5b-SM-5K7YB 144.9
GTEX-11H98-0011-R5b-SM-57WCF 135.3
GTEX-12WSB-0011-R5b-SM-5GU67 134.1
GTEX-S7SE-0011-R5A-SM-2XCDA 133.6
GTEX-T6MN-0011-R5A-SM-32QPD 130.9
GTEX-P44H-0011-R5A-SM-2XCEX 127.8
GTEX-13G51-0011-R5a-SM-5L3EB 122.9
GTEX-PVOW-0011-R5A-SM-32PL7 122.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 121.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 120.9
GTEX-WVLH-0011-R5A-SM-3MJFW 118.7
GTEX-13FLV-0011-R5a-SM-5LZWT 118.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 117.9
GTEX-R55E-0011-R5A-SM-2TC5N 116.8
GTEX-WZTO-0011-R5B-SM-3NMC5 116.8
GTEX-N7MS-0011-R5a-SM-2HMK8 116.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 111.6
GTEX-QVJO-0011-R5A-SM-2S1QM 111.5
GTEX-ZUA1-0011-R5b-SM-51MTG 110.0
GTEX-13OVL-0011-R5b-SM-5L3FU 109.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 109.7
GTEX-13X6K-0011-R5b-SM-5PNUE 107.7
GTEX-UTHO-0011-R5A-SM-3GIJD 105.2
GTEX-13JVG-0011-R5a-SM-5MR4O 104.8
GTEX-13OW6-0011-R5a-SM-5O9BK 104.7
GTEX-11GSP-0011-R5a-SM-57WBE 101.9
GTEX-13X6J-0011-R5b-SM-5PNWT 101.5
GTEX-QMR6-0011-R5A-SM-32PKT 101.3
GTEX-T5JC-0011-R5A-SM-32PLK 101.2
GTEX-RU72-0011-R5A-SM-2TF6U 100.1
GTEX-1313W-0011-R5b-SM-5L3EP 99.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 99.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 98.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 97.7
GTEX-13O3O-0011-R5b-SM-5KM44 97.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 95.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 95.6
GTEX-1445S-0011-R5a-SM-5PNUS 94.9
GTEX-13OW7-0011-R5b-SM-5O9DM 94.5
GTEX-13NYB-0011-R5a-SM-5MR45 93.6
GTEX-13X6I-0011-R5a-SM-5PNWW 92.8
GTEX-145LS-0011-R5a-SM-5SI65 92.8
GTEX-WL46-0011-R5A-SM-3LK6V 92.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 90.9
GTEX-N7MT-0011-R5a-SM-2I3G6 90.5
GTEX-12WSC-0011-R5b-SM-5CVNS 90.2
GTEX-13FXS-0011-R5b-SM-5LZYE 90.1
GTEX-NL4W-0011-R5a-SM-2I3GD 89.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 89.8
GTEX-12ZZX-0011-R5a-SM-5HL89 89.5
GTEX-11OF3-0011-R5a-SM-57WB4 88.9
GTEX-14BIM-0011-R5b-SM-5S2RM 88.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 88.8
GTEX-12WSA-0011-R5b-SM-5GU5I 87.8
GTEX-WWYW-0011-R5A-SM-3NB3E 87.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 86.9
GTEX-13JUV-0011-R5a-SM-5LZY5 86.5
GTEX-1399T-0011-R5b-SM-5IJDK 85.9
GTEX-13VXU-0011-R5a-SM-5O9D7 85.7
GTEX-13CZV-0011-R5a-SM-5K7XA 84.9
GTEX-145MH-0011-R5a-SM-5P9JT 84.3
GTEX-13OW5-0011-R5b-SM-5L3FR 84.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 82.8
GTEX-ZE7O-0011-R5a-SM-57WBO 82.4
GTEX-14ABY-0011-R5b-SM-5SI7B 81.8
GTEX-X261-0011-R5A-SM-3NMB4 81.6
GTEX-ZXG5-0011-R5b-SM-57WBN 80.8
GTEX-13NYS-0011-R5a-SM-5MR4D 80.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 78.6
GTEX-132Q8-0011-R5a-SM-5IJDM 78.5
GTEX-13SLX-0011-R5a-SM-5O9BV 78.4
GTEX-144GL-0011-R5b-SM-5PNUJ 78.3
GTEX-13OVH-0011-R5b-SM-5KM4L 78.2
GTEX-13S7M-0011-R5b-SM-5P9HS 77.7
GTEX-XOTO-0011-R5A-SM-4B657 76.9
GTEX-RVPV-0011-R5A-SM-2TF69 76.8
GTEX-14BIN-0011-R5b-SM-5SI78 76.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 76.4
GTEX-13112-0011-R5b-SM-5DUV8 75.4
GTEX-11NV4-0011-R5a-SM-5NQ88 74.7
GTEX-Z93S-0011-R5b-SM-4RGNI 74.1
GTEX-11WQC-0011-R5a-SM-5BC74 73.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 72.7
GTEX-YFC4-0011-R5a-SM-4RGLR 71.8
GTEX-X4XX-0011-R5A-SM-46MWN 70.7
GTEX-139TT-0011-R5b-SM-5K7W8 69.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 68.9
GTEX-X585-0011-R5A-SM-46MVI 68.5
GTEX-RVPU-0011-R5A-SM-2XCAD 68.2
GTEX-12WSD-0011-R5b-SM-5CVNG 68.1
GTEX-12WSF-0011-R5a-SM-5HL8K 67.0
GTEX-TSE9-0011-R5A-SM-3DB7J 66.8
GTEX-OXRN-0011-R5A-SM-2I5EF 66.0
GTEX-13FLW-0011-R5a-SM-5LZX6 64.8
GTEX-144GO-0011-R5a-SM-5PNUR 64.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 63.4
GTEX-139TS-0011-R5b-SM-5J2MZ 62.7
GTEX-NPJ7-0011-R5a-SM-33HBK 62.1
GTEX-ZVT3-0011-R5a-SM-51MSI 61.3
GTEX-XMD1-0011-R5A-SM-4AT47 60.5
GTEX-ZV68-0011-R5a-SM-4YCDW 60.1
GTEX-13CIG-0011-R5b-SM-5L3F2 59.1
GTEX-OHPN-0011-R5A-SM-2I5FF 59.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 57.6
GTEX-13CF2-0011-R5a-SM-5LZWS 54.9
GTEX-NL3H-0011-R5a-SM-2I3GB 54.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 53.4
GTEX-11UD1-0011-R5b-SM-5P9FP 51.2
GTEX-13FHP-0011-R5b-SM-5LZY2 47.9
GTEX-S7PM-0011-R5A-SM-3NM8G 47.4
GTEX-139T8-0011-R5b-SM-5J1MO 46.9
GTEX-YJ89-0011-R5a-SM-4V6GM 44.3
GTEX-1477Z-0011-R5b-SM-5PNUO 38.6
GTEX-145MG-0011-R5b-SM-5S2VU 38.4
GTEX-12WSH-0011-R5b-SM-5P9F3 37.9
GTEX-13NZA-0011-R5b-SM-5KM4K 32.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

701.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 701.8
FF:10379-105H1 89 years, female 789.3
FF:10164-103B2 76 years, female 614.4

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