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SYT11

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.4TPM
GTEx:8.1RPKM
FANTOM5:29.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA064091

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

6.4
overview Male, age 54
Sample 1
TPM: 4.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 2.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 8.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 6.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 10.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 6.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 3.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 11.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 3.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 7.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 9.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 6.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 11.0
Samples: 149

Max RPKM: 22.4
Min RPKM: 2.7
Std RPKM: 3.7
Median RPKM: 10.2
GTEX-147GR-2826-SM-5RQK8 22.4
GTEX-11PRG-2026-SM-5GU5F 21.9
GTEX-12WSD-2626-SM-5EGJE 19.0
GTEX-ZYY3-2226-SM-5E45A 18.9
GTEX-12ZZY-2726-SM-5EQ45 18.8
GTEX-11DXY-2026-SM-5N9CZ 18.3
GTEX-ZYT6-2826-SM-5GICX 18.0
GTEX-WFON-1326-SM-4LVMN 17.5
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 5.9
Samples: 196

Max RPKM: 23.1
Min RPKM: 0.7
Std RPKM: 4.5
Median RPKM: 4.3
GTEX-12ZZZ-2426-SM-5GCNN 23.1
GTEX-14BMV-2426-SM-5S2PP 21.4
GTEX-111VG-2226-SM-5N9DU 19.6
GTEX-13FHP-2426-SM-5KLZ5 18.5
GTEX-145LS-2726-SM-5Q5D8 18.3
GTEX-13O3O-2526-SM-5L3DR 15.8
GTEX-ZXES-1626-SM-5NQ7L 15.7
GTEX-S341-1426-SM-4AD6U 15.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

29.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 29.9
FF:10014-101C5 62,83,84 years, mixed 29.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.