Tissue expression of SPG20 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	27.4	TPM
GTEx:	5.2	RPKM
FANTOM5:	77.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA039053	Antibody HPA039054
Squamous epithelial cells	Medium	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	27.4

Female, age 70

Sample 1
TPM: 17.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 35.6

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 28.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	5.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 5.2

Samples: 286

Max RPKM: 11
Min RPKM: 2.6
Std RPKM: 1.5
Median RPKM: 4.9

GTEX-XMD2-1326-SM-4YCET

11.0

GTEX-13X6I-1026-SM-5LU4C

10.4

GTEX-P4PP-0626-SM-3NM9X

10.1

GTEX-RUSQ-0826-SM-47JWW

10.1

GTEX-ZZPT-1426-SM-5N9C5

9.9

GTEX-WEY5-0926-SM-4LMI4

9.8

GTEX-146FQ-1026-SM-5LU8I

9.4

GTEX-13OVJ-1226-SM-5L3HA

9.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	77.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 77.2

FF:10015-101C6

68,74,75 years, mixed

77.2