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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:491.6RPKM
FANTOM5:1125.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA039437

 

Antibody CAB008364

 

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

491.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 491.6
Samples: 117

Max RPKM: 872.7
Min RPKM: 199.3
Std RPKM: 123.5
Median RPKM: 487.6
GTEX-12WSA-0011-R5b-SM-5GU5I 872.7
GTEX-X585-0011-R5A-SM-46MVI 832.8
GTEX-X4XX-0011-R5A-SM-46MWN 770.9
GTEX-144GO-0011-R5a-SM-5PNUR 723.3
GTEX-XMD1-0011-R5A-SM-4AT47 709.0
GTEX-12WSC-0011-R5b-SM-5CVNS 658.0
GTEX-139TT-0011-R5b-SM-5K7W8 654.3
GTEX-T6MN-0011-R5A-SM-32QPD 653.6
GTEX-T2IS-0011-R5A-SM-32QP4 650.6
GTEX-11H98-0011-R5b-SM-57WCF 647.4
GTEX-13JUV-0011-R5a-SM-5LZY5 643.2
GTEX-132Q8-0011-R5a-SM-5IJDM 635.1
GTEX-1399T-0011-R5b-SM-5IJDK 630.8
GTEX-QVJO-0011-R5A-SM-2S1QM 630.5
GTEX-11OF3-0011-R5a-SM-57WB4 629.9
GTEX-Z93S-0011-R5b-SM-4RGNI 629.5
GTEX-WWYW-0011-R5A-SM-3NB3E 619.0
GTEX-TSE9-0011-R5A-SM-3DB7J 618.3
GTEX-NL3H-0011-R5a-SM-2I3GB 618.0
GTEX-13G51-0011-R5a-SM-5L3EB 615.9
GTEX-ZUA1-0011-R5b-SM-51MTG 615.9
GTEX-UTHO-0011-R5A-SM-3GIJD 604.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 600.5
GTEX-12WSF-0011-R5a-SM-5HL8K 600.4
GTEX-13NYS-0011-R5a-SM-5MR4D 598.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 596.9
GTEX-RU72-0011-R5A-SM-2TF6U 589.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 577.0
GTEX-P44H-0011-R5A-SM-2XCEX 575.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 570.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 565.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 564.5
GTEX-1313W-0011-R5b-SM-5L3EP 557.4
GTEX-13X6I-0011-R5a-SM-5PNWW 556.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 556.1
GTEX-NPJ7-0011-R5a-SM-33HBK 553.8
GTEX-OHPN-0011-R5A-SM-2I5FF 553.8
GTEX-13NYB-0011-R5a-SM-5MR45 544.4
GTEX-11NV4-0011-R5a-SM-5NQ88 543.3
GTEX-14ABY-0011-R5b-SM-5SI7B 543.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 535.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 534.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 533.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 522.9
GTEX-131YS-0011-R5b-SM-5K7YB 519.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 519.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 517.7
GTEX-N7MT-0011-R5a-SM-2I3G6 516.7
GTEX-S7SE-0011-R5A-SM-2XCDA 516.1
GTEX-145MH-0011-R5a-SM-5P9JT 514.4
GTEX-14BIM-0011-R5b-SM-5S2RM 508.2
GTEX-13X6J-0011-R5b-SM-5PNWT 505.0
GTEX-13O3O-0011-R5b-SM-5KM44 503.7
GTEX-13X6K-0011-R5b-SM-5PNUE 502.5
GTEX-12WSD-0011-R5b-SM-5CVNG 500.6
GTEX-R55E-0011-R5A-SM-2TC5N 499.2
GTEX-T5JC-0011-R5A-SM-32PLK 496.4
GTEX-WVLH-0011-R5A-SM-3MJFW 495.0
GTEX-RVPU-0011-R5A-SM-2XCAD 487.6
GTEX-12WSB-0011-R5b-SM-5GU67 481.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 478.3
GTEX-13VXU-0011-R5a-SM-5O9D7 478.1
GTEX-13CIG-0011-R5b-SM-5L3F2 477.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 477.4
GTEX-145LS-0011-R5a-SM-5SI65 475.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 471.9
GTEX-13CZV-0011-R5a-SM-5K7XA 466.7
GTEX-13OW5-0011-R5b-SM-5L3FR 464.9
GTEX-QMR6-0011-R5A-SM-32PKT 464.8
GTEX-N7MS-0011-R5a-SM-2HMK8 464.1
GTEX-ZXG5-0011-R5b-SM-57WBN 458.9
GTEX-13FLW-0011-R5a-SM-5LZX6 458.5
GTEX-13SLX-0011-R5a-SM-5O9BV 455.8
GTEX-13OW6-0011-R5a-SM-5O9BK 455.6
GTEX-13FLV-0011-R5a-SM-5LZWT 454.5
GTEX-NL4W-0011-R5a-SM-2I3GD 451.6
GTEX-WZTO-0011-R5B-SM-3NMC5 451.3
GTEX-PVOW-0011-R5A-SM-32PL7 450.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 445.9
GTEX-11WQC-0011-R5a-SM-5BC74 438.5
GTEX-OXRN-0011-R5A-SM-2I5EF 435.9
GTEX-11GSP-0011-R5a-SM-57WBE 435.7
GTEX-12ZZX-0011-R5a-SM-5HL89 435.7
GTEX-139T8-0011-R5b-SM-5J1MO 431.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 429.8
GTEX-12WSH-0011-R5b-SM-5P9F3 427.3
GTEX-YFC4-0011-R5a-SM-4RGLR 426.9
GTEX-WL46-0011-R5A-SM-3LK6V 419.1
GTEX-13OVH-0011-R5b-SM-5KM4L 414.5
GTEX-13FXS-0011-R5b-SM-5LZYE 413.4
GTEX-RVPV-0011-R5A-SM-2TF69 408.6
GTEX-ZE7O-0011-R5a-SM-57WBO 405.6
GTEX-X261-0011-R5A-SM-3NMB4 402.7
GTEX-13OVL-0011-R5b-SM-5L3FU 399.5
GTEX-13OW7-0011-R5b-SM-5O9DM 394.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 388.9
GTEX-13JVG-0011-R5a-SM-5MR4O 371.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 370.2
GTEX-YJ89-0011-R5a-SM-4V6GM 366.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 361.7
GTEX-ZV68-0011-R5a-SM-4YCDW 358.0
GTEX-XOTO-0011-R5A-SM-4B657 357.0
GTEX-13S7M-0011-R5b-SM-5P9HS 356.4
GTEX-ZVT3-0011-R5a-SM-51MSI 343.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 339.9
GTEX-1445S-0011-R5a-SM-5PNUS 339.0
GTEX-1477Z-0011-R5b-SM-5PNUO 327.0
GTEX-14BIN-0011-R5b-SM-5SI78 318.3
GTEX-11UD1-0011-R5b-SM-5P9FP 315.7
GTEX-139TS-0011-R5b-SM-5J2MZ 292.1
GTEX-S7PM-0011-R5A-SM-3NM8G 270.5
GTEX-13FHP-0011-R5b-SM-5LZY2 258.1
GTEX-13CF2-0011-R5a-SM-5LZWS 255.3
GTEX-13112-0011-R5b-SM-5DUV8 239.4
GTEX-144GL-0011-R5b-SM-5PNUJ 237.0
GTEX-145MG-0011-R5b-SM-5S2VU 214.4
GTEX-13NZA-0011-R5b-SM-5KM4K 199.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1125.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1125.0
FF:10379-105H1 89 years, female 1176.7
FF:10164-103B2 76 years, female 1073.3

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