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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1634.8TPM
GTEx:285.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA039437

 

Antibody CAB008364

 

Endothelial cells

Low   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Medium  

Neuropil

Low   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1634.8

N/A Male, age 5
Sample 1
TPM: 1585.4
overview Female, age 40
Sample 2
TPM: 1895.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1423.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

285.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 259.8
Samples: 114

Max RPKM: 433.3
Min RPKM: 183.1
Std RPKM: 50.2
Median RPKM: 247.2
GTEX-11OC5-0726-SM-5P9JK 433.3
GTEX-ZAJG-3126-SM-5HL9J 419.4
GTEX-13JUV-2926-SM-5LZX7 388.1
GTEX-144FL-3026-SM-5O99C 382.0
GTEX-13OVJ-2826-SM-5L3GW 374.2
GTEX-X585-3026-SM-46MWF 370.9
GTEX-NPJ8-1526-SM-2D7VU 365.3
GTEX-11TTK-2926-SM-5PNYP 356.9
GTEX-13IVO-2926-SM-5L3CZ 353.7
GTEX-1192X-3126-SM-5N9BY 334.7
GTEX-N7MT-1126-SM-5SI7V 331.4
GTEX-QVJO-1426-SM-2S1QY 326.3
GTEX-147GR-3026-SM-5S2ML 323.2
GTEX-13JVG-3126-SM-5L3FH 316.7
GTEX-NPJ7-2726-SM-2I3FT 315.1
GTEX-13G51-3026-SM-5IJB8 313.7
GTEX-13NYS-3126-SM-5KLYV 308.0
GTEX-13NYC-2826-SM-5K7WR 304.7
GTEX-139T8-1026-SM-5J2MC 303.5
GTEX-ZE7O-3126-SM-5HL5X 302.1
GTEX-132Q8-3026-SM-5PNVG 300.6
GTEX-13PL6-3126-SM-5LUAR 300.3
GTEX-11NV4-2126-SM-5N9DS 299.8
GTEX-111FC-3126-SM-5GZZ2 292.9
GTEX-X4XX-3026-SM-3NMB2 292.9
GTEX-13X6K-2926-SM-5Q5D5 290.5
GTEX-ZZPT-3026-SM-5GZXH 288.4
GTEX-11WQK-3026-SM-5EQL6 286.9
GTEX-13NYB-3026-SM-5IJD7 285.0
GTEX-WZTO-2926-SM-3NM9I 282.4
GTEX-PWO3-0926-SM-2I5EY 281.6
GTEX-QVUS-2826-SM-3GADB 280.2
GTEX-13X6J-3026-SM-5Q5CU 278.7
GTEX-12WSH-3026-SM-5CVNI 275.9
GTEX-1445S-3026-SM-5O9BR 275.5
GTEX-11O72-2926-SM-5BC4V 274.8
GTEX-WWYW-3126-SM-3NB39 270.8
GTEX-12ZZX-2926-SM-5GCOQ 269.2
GTEX-12ZZZ-3026-SM-5BC67 268.1
GTEX-RU72-3026-SM-5SI7Y 265.4
GTEX-13SLX-3126-SM-5S2Q5 265.3
GTEX-145MG-3026-SM-5RQJA 264.6
GTEX-145LS-3126-SM-5Q5BY 262.7
GTEX-11EI6-3026-SM-5GZZO 261.9
GTEX-UTHO-3026-SM-3GAFB 260.0
GTEX-13FHO-3026-SM-5J1O9 259.6
GTEX-11OF3-2926-SM-5HL78 259.5
GTEX-1128S-2726-SM-5H12C 258.7
GTEX-14A5I-2926-SM-5Q5CQ 257.8
GTEX-Y8DK-0826-SM-4TT3T 256.7
GTEX-13PVQ-3026-SM-5SI93 254.9
GTEX-13QIC-2926-SM-5J2NF 250.5
GTEX-Z93S-2926-SM-57WB9 250.3
GTEX-1399T-3026-SM-5KLZC 249.9
GTEX-13O3Q-2926-SM-5KM45 248.4
GTEX-12WSC-3026-SM-5GCNF 247.5
GTEX-13FLW-1426-SM-5K7YE 247.3
GTEX-13OVH-3026-SM-5MR4N 247.2
GTEX-ZAK1-3026-SM-5S2MJ 245.6
GTEX-R55F-1326-SM-5S2V4 245.3
GTEX-11DXY-3226-SM-5GIDE 245.2
GTEX-T2IS-3026-SM-32QPM 244.6
GTEX-ZVT3-3026-SM-5E43N 241.5
GTEX-12ZZY-3026-SM-5GCOU 240.9
GTEX-Q2AG-2926-SM-2HMJ3 240.3
GTEX-12126-1026-SM-5P9JJ 239.7
GTEX-14BMV-3026-SM-5S2PQ 239.2
GTEX-11PRG-2926-SM-5987A 237.6
GTEX-OXRN-2426-SM-2I5EQ 237.3
GTEX-13VXU-2926-SM-5LU5C 237.1
GTEX-131YS-3126-SM-5KLYT 236.7
GTEX-1117F-3226-SM-5N9CT 236.5
GTEX-ZYFD-3026-SM-5E44C 235.7
GTEX-13FHP-3026-SM-5IJBS 235.6
GTEX-QDT8-2926-SM-32PKC 235.6
GTEX-YFC4-3126-SM-5PNV6 235.1
GTEX-WVLH-3026-SM-3MJG9 234.8
GTEX-WHSE-3026-SM-3P5ZH 233.8
GTEX-13OW6-3026-SM-5J2MI 232.6
GTEX-13O3O-3126-SM-5KM3H 232.3
GTEX-PVOW-2526-SM-2XCF7 231.6
GTEX-12ZZW-2926-SM-5LZUP 230.8
GTEX-Y111-2726-SM-4TT3N 228.8
GTEX-14ASI-3026-SM-5S2PN 227.9
GTEX-11EMC-3226-SM-5EGKW 227.7
GTEX-11GSO-2926-SM-5HL73 223.8
GTEX-145MH-3026-SM-5Q5DZ 223.6
GTEX-ZUA1-3026-SM-59HJC 223.3
GTEX-11NUK-2926-SM-5A5MD 221.9
GTEX-11ONC-2926-SM-5P9JM 220.2
GTEX-WL46-2926-SM-3LK82 219.4
GTEX-13OW8-2826-SM-5L3GC 219.3
GTEX-117XS-3026-SM-5N9CA 218.4
GTEX-11GSP-3226-SM-5986O 216.3
GTEX-13S7M-3126-SM-5RQJQ 216.0
GTEX-YJ89-3026-SM-5IFJI 215.6
GTEX-12WSA-2926-SM-5EQ4D 215.2
GTEX-XOTO-3026-SM-4B65M 212.7
GTEX-RNOR-2326-SM-2TF4I 210.6
GTEX-1313W-3126-SM-5LZUI 210.1
GTEX-11ZUS-2926-SM-5FQSL 209.4
GTEX-T5JC-2426-SM-3NMDB 206.4
GTEX-12WSD-3126-SM-5HL7P 203.1
GTEX-144GL-3026-SM-5Q5CW 202.9
GTEX-XLM4-3026-SM-4AT6L 201.7
GTEX-145MF-2726-SM-5O995 200.1
GTEX-QMR6-1426-SM-32PLA 200.1
GTEX-T6MN-2626-SM-32PMQ 197.2
GTEX-131XW-3126-SM-5LZUC 196.6
GTEX-13FXS-3126-SM-5J2NN 195.1
GTEX-11DXW-1126-SM-5H12Q 194.8
GTEX-11GS4-3126-SM-5A5LH 190.9
GTEX-TSE9-3026-SM-3DB76 189.9
GTEX-13OW7-3026-SM-5L3GY 183.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 313.4
Samples: 108

Max RPKM: 684.2
Min RPKM: 179.8
Std RPKM: 86.4
Median RPKM: 287.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 684.2
GTEX-XMD1-0011-R10A-SM-4AT4A 655.5
GTEX-11ZUS-0011-R10b-SM-5BC79 634.3
GTEX-12WSD-0011-R10b-SM-5GU79 531.6
GTEX-13JVG-0011-R10b-SM-5KM2P 482.3
GTEX-13N2G-0011-R10a-SM-5MR34 470.1
GTEX-13JUV-0011-R10b-SM-5LZXR 426.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 422.0
GTEX-13QJC-0011-R10a-SM-5SI63 415.1
GTEX-139TS-0011-R10a-SM-5K7TU 411.8
GTEX-13NYS-0011-R10a-SM-5MR4S 409.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 408.2
GTEX-NL4W-0011-R10A-SM-2I3DY 403.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 397.7
GTEX-X261-0011-R10B-SM-4E3JT 397.6
GTEX-11WQK-0011-R10a-SM-5BC6R 397.5
GTEX-13X6I-0011-R10a-SM-5PNWI 397.1
GTEX-QVUS-0011-R10A-SM-3GIK3 378.6
GTEX-13IVO-0011-R10a-SM-5LZY3 377.2
GTEX-12WSC-0011-R10a-SM-5GU57 363.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 361.1
GTEX-147GR-0011-R10b-SM-5S2UM 359.8
GTEX-Z93S-0011-R10a-SM-4RGNM 355.3
GTEX-13O3O-0011-R10a-SM-5LUA9 353.0
GTEX-1445S-0011-R10a-SM-5PNWB 348.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 344.7
GTEX-WWYW-0011-R10A-SM-3NB35 344.4
GTEX-ZUA1-0011-R10a-SM-51MT6 343.2
GTEX-X4EP-0011-R10B-SM-4QASJ 340.7
GTEX-X585-0011-R10A-SM-46MUY 338.5
GTEX-ZXG5-0011-R10a-SM-57WDD 336.8
GTEX-P44H-0011-R10A-SM-2XCEK 335.3
GTEX-13SLX-0011-R10a-SM-5P9HV 333.8
GTEX-13NYB-0011-R10a-SM-5KM43 332.6
GTEX-OXRO-0011-R10A-SM-2I5EH 332.0
GTEX-ZVT3-0011-R10b-SM-57WB6 328.6
GTEX-13QIC-0011-R10a-SM-5O9C7 325.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 322.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 322.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 321.8
GTEX-11H98-0011-R10b-SM-5NQ98 319.1
GTEX-14BIN-0011-R10a-SM-5S2UA 314.7
GTEX-12126-0011-R10b-SM-5BC6T 314.5
GTEX-X4XX-0011-R10B-SM-46MWO 313.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 313.3
GTEX-12WSA-0011-R10b-SM-5P9ET 311.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 308.0
GTEX-13SLW-0011-R10a-SM-5S2UI 305.8
GTEX-TSE9-0011-R10A-SM-3DB7O 304.7
GTEX-13FLW-0011-R10b-SM-5LZZF 304.2
GTEX-N7MT-0011-R10A-SM-2I3E1 302.1
GTEX-13OW6-0011-R10a-SM-5L3HE 298.5
GTEX-NL3H-0011-R10A-SM-2I3E9 293.9
GTEX-12WSH-0011-R10a-SM-5LZUS 288.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 286.3
GTEX-13X6J-0011-R10b-SM-5PNWA 282.6
GTEX-YJ89-0011-R10a-SM-4SOK9 282.5
GTEX-N7MS-0011-R10A-SM-2HMJK 280.6
GTEX-13G51-0011-R10b-SM-5LZYF 280.4
GTEX-ZV68-0011-R10a-SM-51MT7 280.3
GTEX-ZF28-0011-R10a-SM-4WWEH 280.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 279.8
GTEX-QMR6-0011-R10A-SM-32PKO 279.6
GTEX-T5JC-0011-R10A-SM-32PM2 279.4
GTEX-11WQC-0011-R10a-SM-57WCT 279.1
GTEX-145LS-0011-R10a-SM-5PNUQ 277.5
GTEX-13FXS-0011-R10a-SM-5J2MA 275.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 274.9
GTEX-13O3Q-0011-R10b-SM-5KM39 274.8
GTEX-YFC4-0011-R10a-SM-4SOK5 271.3
GTEX-OXRN-0011-R10A-SM-2I5GC 271.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 271.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 266.6
GTEX-145LU-0011-R10a-SM-5PNWJ 264.0
GTEX-131YS-0011-R10b-SM-5EQ5N 263.7
GTEX-13OVL-0011-R10a-SM-5L3GS 262.7
GTEX-13OW7-0011-R10a-SM-5L3H3 259.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 259.1
GTEX-RVPU-0011-R10A-SM-2XCAH 258.8
GTEX-145MG-0011-R10a-SM-5PNWG 258.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 256.7
GTEX-13N1W-0011-R10b-SM-5MR4H 256.7
GTEX-13FHO-0011-R10b-SM-5J2MM 256.2
GTEX-13S7M-0011-R10b-SM-5PNZB 255.4
GTEX-XLM4-0011-R10A-SM-4AT5P 254.2
GTEX-12WSM-0011-R10a-SM-5DUWV 253.5
GTEX-1313W-0011-R10b-SM-5DUXA 252.6
GTEX-13OW8-0011-R10a-SM-5L3H6 252.5
GTEX-12WSF-0011-R10a-SM-5LZVH 250.2
GTEX-1477Z-0011-R10b-SM-5S2RF 249.2
GTEX-13X6K-0011-R10a-SM-5P9JR 247.8
GTEX-WZTO-0011-R10B-SM-4E3KB 246.7
GTEX-145MH-0011-R10b-SM-5PNUK 245.2
GTEX-147F4-0011-R10b-SM-5S2WC 240.6
GTEX-14BIL-0011-R10a-SM-5SI75 240.1
GTEX-WL46-0011-R10A-SM-3MJFQ 238.7
GTEX-WVLH-0011-R10A-SM-3MJFM 237.1
GTEX-S7SE-0011-R10A-SM-2XCDF 232.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 232.1
GTEX-T6MN-0011-R10A-SM-32QP7 231.0
GTEX-13CZV-0011-R10b-SM-5LZYD 229.7
GTEX-12WSE-0011-R10b-SM-5P9JV 222.3
GTEX-131XH-0011-R10a-SM-5EGLJ 221.0
GTEX-13NZA-0011-R10b-SM-5KM54 218.7
GTEX-14753-0011-R10b-SM-5S2WE 211.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 200.7
GTEX-QDT8-0011-R10A-SM-32PKG 198.8
GTEX-131XW-0011-R10a-SM-5DUVA 179.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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