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PDE6B
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:8.0RPKM
FANTOM5:7.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA054148

 

Antibody HPA059929

 

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

8.0

GTEx sample id

RPKM

5.57.510.02.015.40246810121416182022242628
 
5.57.510.02.015.40246810121416182022242628

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 8.0
Samples: 117

Max RPKM: 28.2
Min RPKM: 2
Std RPKM: 4.1
Median RPKM: 7.5
GTEX-X4XX-0011-R5A-SM-46MWN 28.2
GTEX-X585-0011-R5A-SM-46MVI 22.7
GTEX-WL46-0011-R5A-SM-3LK6V 20.9
GTEX-R55E-0011-R5A-SM-2TC5N 17.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 15.4
GTEX-WWYW-0011-R5A-SM-3NB3E 14.1
GTEX-13O3O-0011-R5b-SM-5KM44 14.0
GTEX-YFC4-0011-R5a-SM-4RGLR 13.0
GTEX-12WSF-0011-R5a-SM-5HL8K 12.6
GTEX-WZTO-0011-R5B-SM-3NMC5 12.6
GTEX-QMR6-0011-R5A-SM-32PKT 12.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 12.3
GTEX-N7MS-0011-R5a-SM-2HMK8 12.3
GTEX-13X6K-0011-R5b-SM-5PNUE 12.2
GTEX-13G51-0011-R5a-SM-5L3EB 12.1
GTEX-13NYB-0011-R5a-SM-5MR45 12.1
GTEX-XOTO-0011-R5A-SM-4B657 12.1
GTEX-RVPV-0011-R5A-SM-2TF69 11.6
GTEX-WVLH-0011-R5A-SM-3MJFW 11.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 11.6
GTEX-ZE7O-0011-R5a-SM-57WBO 11.1
GTEX-13FLV-0011-R5a-SM-5LZWT 11.0
GTEX-13OW6-0011-R5a-SM-5O9BK 11.0
GTEX-13OW7-0011-R5b-SM-5O9DM 10.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 10.6
GTEX-12WSD-0011-R5b-SM-5CVNG 10.2
GTEX-P44H-0011-R5A-SM-2XCEX 10.2
GTEX-11NV4-0011-R5a-SM-5NQ88 10.1
GTEX-1399T-0011-R5b-SM-5IJDK 10.1
GTEX-T6MN-0011-R5A-SM-32QPD 10.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 9.7
GTEX-13FXS-0011-R5b-SM-5LZYE 9.5
GTEX-11GSP-0011-R5a-SM-57WBE 9.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 9.3
GTEX-13FLW-0011-R5a-SM-5LZX6 9.3
GTEX-1313W-0011-R5b-SM-5L3EP 9.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 9.1
GTEX-14BIN-0011-R5b-SM-5SI78 9.1
GTEX-Z93S-0011-R5b-SM-4RGNI 9.1
GTEX-12WSC-0011-R5b-SM-5CVNS 9.0
GTEX-PVOW-0011-R5A-SM-32PL7 9.0
GTEX-14ABY-0011-R5b-SM-5SI7B 8.9
GTEX-ZUA1-0011-R5b-SM-51MTG 8.9
GTEX-13OVH-0011-R5b-SM-5KM4L 8.8
GTEX-13OVL-0011-R5b-SM-5L3FU 8.7
GTEX-13X6I-0011-R5a-SM-5PNWW 8.7
GTEX-145LS-0011-R5a-SM-5SI65 8.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 8.5
GTEX-131YS-0011-R5b-SM-5K7YB 8.4
GTEX-13SLX-0011-R5a-SM-5O9BV 8.3
GTEX-145MH-0011-R5a-SM-5P9JT 8.2
GTEX-OHPN-0011-R5A-SM-2I5FF 8.1
GTEX-13S7M-0011-R5b-SM-5P9HS 8.0
GTEX-13OW5-0011-R5b-SM-5L3FR 7.9
GTEX-UTHO-0011-R5A-SM-3GIJD 7.8
GTEX-RU72-0011-R5A-SM-2TF6U 7.7
GTEX-139TS-0011-R5b-SM-5J2MZ 7.6
GTEX-13VXU-0011-R5a-SM-5O9D7 7.5
GTEX-S7SE-0011-R5A-SM-2XCDA 7.5
GTEX-12WSB-0011-R5b-SM-5GU67 7.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 7.4
GTEX-13X6J-0011-R5b-SM-5PNWT 7.4
GTEX-132Q8-0011-R5a-SM-5IJDM 7.3
GTEX-RVPU-0011-R5A-SM-2XCAD 7.2
GTEX-XMD1-0011-R5A-SM-4AT47 7.0
GTEX-14BIM-0011-R5b-SM-5S2RM 6.9
GTEX-13JUV-0011-R5a-SM-5LZY5 6.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 6.8
GTEX-T5JC-0011-R5A-SM-32PLK 6.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 6.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 6.6
GTEX-11OF3-0011-R5a-SM-57WB4 6.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 6.5
GTEX-144GL-0011-R5b-SM-5PNUJ 6.5
GTEX-N7MT-0011-R5a-SM-2I3G6 6.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 6.4
GTEX-ZXG5-0011-R5b-SM-57WBN 6.4
GTEX-13JVG-0011-R5a-SM-5MR4O 6.3
GTEX-ZVT3-0011-R5a-SM-51MSI 6.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 6.0
GTEX-NL3H-0011-R5a-SM-2I3GB 6.0
GTEX-TSE9-0011-R5A-SM-3DB7J 6.0
GTEX-13FHP-0011-R5b-SM-5LZY2 5.9
GTEX-12ZZX-0011-R5a-SM-5HL89 5.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 5.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 5.7
GTEX-11H98-0011-R5b-SM-57WCF 5.6
GTEX-QVJO-0011-R5A-SM-2S1QM 5.5
GTEX-11WQC-0011-R5a-SM-5BC74 5.3
GTEX-13CZV-0011-R5a-SM-5K7XA 5.3
GTEX-13NYS-0011-R5a-SM-5MR4D 4.7
GTEX-12WSA-0011-R5b-SM-5GU5I 4.6
GTEX-13CF2-0011-R5a-SM-5LZWS 4.5
GTEX-T2IS-0011-R5A-SM-32QP4 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 4.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 4.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 4.2
GTEX-YJ89-0011-R5a-SM-4V6GM 4.1
GTEX-OXRN-0011-R5A-SM-2I5EF 4.0
GTEX-NL4W-0011-R5a-SM-2I3GD 3.8
GTEX-13112-0011-R5b-SM-5DUV8 3.7
GTEX-12WSH-0011-R5b-SM-5P9F3 3.6
GTEX-144GO-0011-R5a-SM-5PNUR 3.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 3.6
GTEX-1445S-0011-R5a-SM-5PNUS 3.4
GTEX-NPJ7-0011-R5a-SM-33HBK 3.3
GTEX-ZV68-0011-R5a-SM-4YCDW 2.9
GTEX-1477Z-0011-R5b-SM-5PNUO 2.8
GTEX-X261-0011-R5A-SM-3NMB4 2.8
GTEX-S7PM-0011-R5A-SM-3NM8G 2.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 2.5
GTEX-139TT-0011-R5b-SM-5K7W8 2.5
GTEX-13CIG-0011-R5b-SM-5L3F2 2.3
GTEX-145MG-0011-R5b-SM-5S2VU 2.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 2.3
GTEX-139T8-0011-R5b-SM-5J1MO 2.0
GTEX-13NZA-0011-R5b-SM-5KM4K 2.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

7.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 7.9
FF:10164-103B2 76 years, female 8.1
FF:10379-105H1 89 years, female 7.6

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