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PDE6B
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.4TPM
GTEx:5.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA054148

 

Antibody HPA059929

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

22.4

N/A Male, age 5
Sample 1
TPM: 13.7
overview Female, age 40
Sample 2
TPM: 24.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 29.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

5.0

GTEx sample id

RPKM

4.05.17.21.711.80246810121416182022242628
 
4.05.17.21.711.80246810121416182022242628

Brain - Cortex

Brain - Cortex
RPKM: 6.4
Samples: 114

Max RPKM: 29.5
Min RPKM: 1.7
Std RPKM: 4.2
Median RPKM: 5.1
GTEX-11GS4-3126-SM-5A5LH 29.5
GTEX-13G51-3026-SM-5IJB8 27.7
GTEX-111FC-3126-SM-5GZZ2 21.0
GTEX-13OW8-2826-SM-5L3GC 17.5
GTEX-13NYB-3026-SM-5IJD7 13.1
GTEX-N7MT-1126-SM-5SI7V 12.8
GTEX-13FHP-3026-SM-5IJBS 12.3
GTEX-QVUS-2826-SM-3GADB 12.2
GTEX-12ZZY-3026-SM-5GCOU 11.8
GTEX-1192X-3126-SM-5N9BY 11.5
GTEX-ZAJG-3126-SM-5HL9J 10.8
GTEX-13OVJ-2826-SM-5L3GW 10.7
GTEX-11ONC-2926-SM-5P9JM 9.9
GTEX-13JUV-2926-SM-5LZX7 9.9
GTEX-X585-3026-SM-46MWF 9.9
GTEX-YFC4-3126-SM-5PNV6 9.9
GTEX-UTHO-3026-SM-3GAFB 9.7
GTEX-12WSD-3126-SM-5HL7P 9.6
GTEX-1313W-3126-SM-5LZUI 8.9
GTEX-T6MN-2626-SM-32PMQ 8.2
GTEX-XOTO-3026-SM-4B65M 8.0
GTEX-13FLW-1426-SM-5K7YE 7.8
GTEX-WL46-2926-SM-3LK82 7.7
GTEX-13OVH-3026-SM-5MR4N 7.5
GTEX-11DXW-1126-SM-5H12Q 7.4
GTEX-13OW6-3026-SM-5J2MI 7.4
GTEX-13PVQ-3026-SM-5SI93 7.4
GTEX-13S7M-3126-SM-5RQJQ 7.2
GTEX-T5JC-2426-SM-3NMDB 7.2
GTEX-11GSO-2926-SM-5HL73 7.0
GTEX-13FHO-3026-SM-5J1O9 7.0
GTEX-13OW7-3026-SM-5L3GY 7.0
GTEX-XLM4-3026-SM-4AT6L 6.9
GTEX-11WQK-3026-SM-5EQL6 6.8
GTEX-14BMV-3026-SM-5S2PQ 6.8
GTEX-1445S-3026-SM-5O9BR 6.6
GTEX-11ZUS-2926-SM-5FQSL 6.4
GTEX-QDT8-2926-SM-32PKC 6.3
GTEX-1117F-3226-SM-5N9CT 6.2
GTEX-147GR-3026-SM-5S2ML 6.2
GTEX-QMR6-1426-SM-32PLA 6.2
GTEX-11DXY-3226-SM-5GIDE 5.9
GTEX-13O3O-3126-SM-5KM3H 5.9
GTEX-ZYFD-3026-SM-5E44C 5.9
GTEX-117XS-3026-SM-5N9CA 5.8
GTEX-ZAK1-3026-SM-5S2MJ 5.8
GTEX-RNOR-2326-SM-2TF4I 5.7
GTEX-145LS-3126-SM-5Q5BY 5.6
GTEX-11NUK-2926-SM-5A5MD 5.5
GTEX-WVLH-3026-SM-3MJG9 5.5
GTEX-ZVT3-3026-SM-5E43N 5.5
GTEX-145MG-3026-SM-5RQJA 5.4
GTEX-11O72-2926-SM-5BC4V 5.2
GTEX-131YS-3126-SM-5KLYT 5.2
GTEX-13QIC-2926-SM-5J2NF 5.2
GTEX-Q2AG-2926-SM-2HMJ3 5.2
GTEX-13SLX-3126-SM-5S2Q5 5.1
GTEX-13X6J-3026-SM-5Q5CU 5.1
GTEX-12WSC-3026-SM-5GCNF 5.0
GTEX-12ZZZ-3026-SM-5BC67 5.0
GTEX-1399T-3026-SM-5KLZC 5.0
GTEX-144GL-3026-SM-5Q5CW 5.0
GTEX-X4XX-3026-SM-3NMB2 5.0
GTEX-11GSP-3226-SM-5986O 4.8
GTEX-14ASI-3026-SM-5S2PN 4.8
GTEX-Y8DK-0826-SM-4TT3T 4.8
GTEX-12ZZX-2926-SM-5GCOQ 4.7
GTEX-13FXS-3126-SM-5J2NN 4.7
GTEX-145MH-3026-SM-5Q5DZ 4.7
GTEX-Y111-2726-SM-4TT3N 4.7
GTEX-ZE7O-3126-SM-5HL5X 4.7
GTEX-ZUA1-3026-SM-59HJC 4.7
GTEX-13JVG-3126-SM-5L3FH 4.6
GTEX-13NYS-3126-SM-5KLYV 4.6
GTEX-RU72-3026-SM-5SI7Y 4.6
GTEX-11EI6-3026-SM-5GZZO 4.5
GTEX-13O3Q-2926-SM-5KM45 4.5
GTEX-13VXU-2926-SM-5LU5C 4.5
GTEX-145MF-2726-SM-5O995 4.5
GTEX-WHSE-3026-SM-3P5ZH 4.5
GTEX-12126-1026-SM-5P9JJ 4.3
GTEX-13X6K-2926-SM-5Q5D5 4.3
GTEX-YJ89-3026-SM-5IFJI 4.2
GTEX-11EMC-3226-SM-5EGKW 4.0
GTEX-11TTK-2926-SM-5PNYP 4.0
GTEX-13NYC-2826-SM-5K7WR 4.0
GTEX-13PL6-3126-SM-5LUAR 4.0
GTEX-11PRG-2926-SM-5987A 3.9
GTEX-NPJ7-2726-SM-2I3FT 3.9
GTEX-11OC5-0726-SM-5P9JK 3.8
GTEX-12WSH-3026-SM-5CVNI 3.8
GTEX-R55F-1326-SM-5S2V4 3.7
GTEX-QVJO-1426-SM-2S1QY 3.6
GTEX-T2IS-3026-SM-32QPM 3.6
GTEX-TSE9-3026-SM-3DB76 3.6
GTEX-1128S-2726-SM-5H12C 3.5
GTEX-12WSA-2926-SM-5EQ4D 3.5
GTEX-14A5I-2926-SM-5Q5CQ 3.5
GTEX-WWYW-3126-SM-3NB39 3.5
GTEX-PWO3-0926-SM-2I5EY 3.4
GTEX-131XW-3126-SM-5LZUC 3.3
GTEX-132Q8-3026-SM-5PNVG 3.3
GTEX-12ZZW-2926-SM-5LZUP 3.2
GTEX-13IVO-2926-SM-5L3CZ 3.2
GTEX-OXRN-2426-SM-2I5EQ 3.2
GTEX-WZTO-2926-SM-3NM9I 3.2
GTEX-Z93S-2926-SM-57WB9 3.0
GTEX-11NV4-2126-SM-5N9DS 2.8
GTEX-NPJ8-1526-SM-2D7VU 2.7
GTEX-PVOW-2526-SM-2XCF7 2.6
GTEX-11OF3-2926-SM-5HL78 2.5
GTEX-144FL-3026-SM-5O99C 2.3
GTEX-ZZPT-3026-SM-5GZXH 2.0
GTEX-139T8-1026-SM-5J2MC 1.7
Show all
2.33.54.60.87.4012345678910111213
 
2.33.54.60.87.4012345678910111213

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 3.7
Samples: 108

Max RPKM: 13
Min RPKM: 0.8
Std RPKM: 1.8
Median RPKM: 3.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 13.0
GTEX-XMD1-0011-R10A-SM-4AT4A 9.3
GTEX-13CZV-0011-R10b-SM-5LZYD 7.4
GTEX-X585-0011-R10A-SM-46MUY 7.2
GTEX-13FLW-0011-R10b-SM-5LZZF 6.8
GTEX-WVLH-0011-R10A-SM-3MJFM 6.8
GTEX-13N1W-0011-R10b-SM-5MR4H 6.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 6.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 6.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 6.2
GTEX-WWYW-0011-R10A-SM-3NB35 6.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 6.0
GTEX-YFC4-0011-R10a-SM-4SOK5 5.9
GTEX-13OVL-0011-R10a-SM-5L3GS 5.6
GTEX-13OW8-0011-R10a-SM-5L3H6 5.4
GTEX-12WSF-0011-R10a-SM-5LZVH 5.3
GTEX-13JVG-0011-R10b-SM-5KM2P 5.3
GTEX-13X6K-0011-R10a-SM-5P9JR 5.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 5.2
GTEX-147F4-0011-R10b-SM-5S2WC 5.2
GTEX-12WSD-0011-R10b-SM-5GU79 5.1
GTEX-13OW6-0011-R10a-SM-5L3HE 5.0
GTEX-145MH-0011-R10b-SM-5PNUK 5.0
GTEX-XLM4-0011-R10A-SM-4AT5P 4.9
GTEX-131XH-0011-R10a-SM-5EGLJ 4.8
GTEX-13OW7-0011-R10a-SM-5L3H3 4.8
GTEX-S7SE-0011-R10A-SM-2XCDF 4.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 4.6
GTEX-13NYB-0011-R10a-SM-5KM43 4.5
GTEX-RVPU-0011-R10A-SM-2XCAH 4.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 4.2
GTEX-13S7M-0011-R10b-SM-5PNZB 4.1
GTEX-14BIL-0011-R10a-SM-5SI75 4.1
GTEX-N7MT-0011-R10A-SM-2I3E1 4.1
GTEX-QVUS-0011-R10A-SM-3GIK3 4.1
GTEX-13FHO-0011-R10b-SM-5J2MM 4.0
GTEX-13G51-0011-R10b-SM-5LZYF 4.0
GTEX-13O3O-0011-R10a-SM-5LUA9 4.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 4.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 4.0
GTEX-T6MN-0011-R10A-SM-32QP7 4.0
GTEX-QMR6-0011-R10A-SM-32PKO 3.9
GTEX-11WQC-0011-R10a-SM-57WCT 3.8
GTEX-13SLX-0011-R10a-SM-5P9HV 3.8
GTEX-P44H-0011-R10A-SM-2XCEK 3.8
GTEX-T5JC-0011-R10A-SM-32PM2 3.8
GTEX-X4XX-0011-R10B-SM-46MWO 3.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 3.8
GTEX-13QIC-0011-R10a-SM-5O9C7 3.7
GTEX-11H98-0011-R10b-SM-5NQ98 3.6
GTEX-QDT8-0011-R10A-SM-32PKG 3.6
GTEX-WL46-0011-R10A-SM-3MJFQ 3.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 3.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 3.5
GTEX-13JUV-0011-R10b-SM-5LZXR 3.5
GTEX-13FXS-0011-R10a-SM-5J2MA 3.4
GTEX-WZTO-0011-R10B-SM-4E3KB 3.4
GTEX-13O3Q-0011-R10b-SM-5KM39 3.2
GTEX-145LU-0011-R10a-SM-5PNWJ 3.2
GTEX-131YS-0011-R10b-SM-5EQ5N 3.1
GTEX-ZVT3-0011-R10b-SM-57WB6 3.1
GTEX-12WSE-0011-R10b-SM-5P9JV 3.0
GTEX-145LS-0011-R10a-SM-5PNUQ 3.0
GTEX-12WSC-0011-R10a-SM-5GU57 2.9
GTEX-12WSM-0011-R10a-SM-5DUWV 2.9
GTEX-13X6I-0011-R10a-SM-5PNWI 2.9
GTEX-N7MS-0011-R10A-SM-2HMJK 2.9
GTEX-12WSH-0011-R10a-SM-5LZUS 2.8
GTEX-1313W-0011-R10b-SM-5DUXA 2.7
GTEX-13SLW-0011-R10a-SM-5S2UI 2.7
GTEX-OXRN-0011-R10A-SM-2I5GC 2.7
GTEX-ZUA1-0011-R10a-SM-51MT6 2.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 2.6
GTEX-13X6J-0011-R10b-SM-5PNWA 2.5
GTEX-1445S-0011-R10a-SM-5PNWB 2.5
GTEX-Z93S-0011-R10a-SM-4RGNM 2.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 2.4
GTEX-12WSA-0011-R10b-SM-5P9ET 2.3
GTEX-13NYS-0011-R10a-SM-5MR4S 2.3
GTEX-145MG-0011-R10a-SM-5PNWG 2.3
GTEX-14BIN-0011-R10a-SM-5S2UA 2.3
GTEX-YJ89-0011-R10a-SM-4SOK9 2.3
GTEX-ZF28-0011-R10a-SM-4WWEH 2.3
GTEX-ZV68-0011-R10a-SM-51MT7 2.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 2.1
GTEX-13NZA-0011-R10b-SM-5KM54 2.1
GTEX-X261-0011-R10B-SM-4E3JT 2.1
GTEX-147GR-0011-R10b-SM-5S2UM 2.0
GTEX-NL3H-0011-R10A-SM-2I3E9 2.0
GTEX-X4EP-0011-R10B-SM-4QASJ 2.0
GTEX-1477Z-0011-R10b-SM-5S2RF 1.9
GTEX-TSE9-0011-R10A-SM-3DB7O 1.9
GTEX-12126-0011-R10b-SM-5BC6T 1.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 1.7
GTEX-13N2G-0011-R10a-SM-5MR34 1.7
GTEX-13QJC-0011-R10a-SM-5SI63 1.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 1.6
GTEX-131XW-0011-R10a-SM-5DUVA 1.6
GTEX-14753-0011-R10b-SM-5S2WE 1.6
GTEX-ZXG5-0011-R10a-SM-57WDD 1.6
GTEX-13IVO-0011-R10a-SM-5LZY3 1.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 1.5
GTEX-11WQK-0011-R10a-SM-5BC6R 1.4
GTEX-NL4W-0011-R10A-SM-2I3DY 1.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 1.4
GTEX-11ZUS-0011-R10b-SM-5BC79 1.1
GTEX-139TS-0011-R10a-SM-5K7TU 1.0
GTEX-OXRO-0011-R10A-SM-2I5EH 0.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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