Expression of SLF1 in cancer - Summary - The Human Protein Atlas

CANCER ATLAS

Gene description

SMC5-SMC6 complex localization factor 1

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA040793

GENE INFORMATION
Gene name	SLF1 (HGNC Symbol)
Synonyms	ANKRD32, BRCTD1, BRCTx, DKFZp564C0469, DKFZp761C121
Description	SMC5-SMC6 complex localization factor 1 (HGNC Symbol)
Entrez gene summary
Chromosome	5
Cytoband	q15
Chromosome location (bp)	94618347 - 94739436
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000133302 (version 83.38)
Entrez gene	84250
UniProt	Q9BQI6 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BQI6
Antibodypedia	SLF1 antibodies

PROTEIN BROWSER

SLF1-001	SLF1-007

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SLF1-001 ENSP00000265140 ENST00000265140	Q9BQI6 [Direct mapping] Ankyrin repeat domain-containing protein 32 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000786 [nucleosome] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005813 [centrosome] GO:0006974 [cellular response to DNA damage stimulus] GO:0031334 [positive regulation of protein complex assembly] GO:0031625 [ubiquitin protein ligase binding] GO:0032403 [protein complex binding] GO:0034184 [positive regulation of maintenance of mitotic sister chromatid cohesion] GO:0035861 [site of double-strand break] GO:0042405 [nuclear inclusion body] GO:1990166 [protein localization to site of double-strand break] GO:2000781 [positive regulation of double-strand break repair] Show all	1058 aa 121 kDa	No	1
SLF1-007 ENSP00000425022 ENST00000504099	D6RED9 [Direct mapping] Ankyrin repeat domain-containing protein 32 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		131 aa 15.3 kDa	No	0