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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:95.8RPKM
FANTOM5:433.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA015649

 

Antibody HPA015650

 

Glial cells

Not detected   Medium  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

95.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 95.8
Samples: 117

Max RPKM: 225.6
Min RPKM: 19.2
Std RPKM: 36.7
Median RPKM: 100.6
GTEX-T2IS-0011-R5A-SM-32QP4 225.6
GTEX-13G51-0011-R5a-SM-5L3EB 159.6
GTEX-139TT-0011-R5b-SM-5K7W8 156.1
GTEX-12WSC-0011-R5b-SM-5CVNS 154.9
GTEX-131YS-0011-R5b-SM-5K7YB 154.1
GTEX-P44H-0011-R5A-SM-2XCEX 153.5
GTEX-PVOW-0011-R5A-SM-32PL7 152.4
GTEX-QVJO-0011-R5A-SM-2S1QM 148.8
GTEX-X585-0011-R5A-SM-46MVI 148.4
GTEX-UTHO-0011-R5A-SM-3GIJD 148.3
GTEX-T6MN-0011-R5A-SM-32QPD 144.7
GTEX-WZTO-0011-R5B-SM-3NMC5 141.0
GTEX-WL46-0011-R5A-SM-3LK6V 138.6
GTEX-WWYW-0011-R5A-SM-3NB3E 136.0
GTEX-1313W-0011-R5b-SM-5L3EP 134.8
GTEX-1399T-0011-R5b-SM-5IJDK 134.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 134.2
GTEX-14BIM-0011-R5b-SM-5S2RM 133.1
GTEX-WVLH-0011-R5A-SM-3MJFW 130.7
GTEX-145MH-0011-R5a-SM-5P9JT 130.6
GTEX-13X6J-0011-R5b-SM-5PNWT 129.8
GTEX-N7MS-0011-R5a-SM-2HMK8 129.8
GTEX-S7SE-0011-R5A-SM-2XCDA 129.4
GTEX-145LS-0011-R5a-SM-5SI65 128.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 128.4
GTEX-13X6K-0011-R5b-SM-5PNUE 126.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 124.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 123.4
GTEX-11H98-0011-R5b-SM-57WCF 122.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 120.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 118.3
GTEX-13FXS-0011-R5b-SM-5LZYE 117.6
GTEX-14ABY-0011-R5b-SM-5SI7B 117.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 117.4
GTEX-13OW6-0011-R5a-SM-5O9BK 115.6
GTEX-13VXU-0011-R5a-SM-5O9D7 113.7
GTEX-N7MT-0011-R5a-SM-2I3G6 112.6
GTEX-11NV4-0011-R5a-SM-5NQ88 111.5
GTEX-ZUA1-0011-R5b-SM-51MTG 110.9
GTEX-11OF3-0011-R5a-SM-57WB4 110.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 110.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 109.8
GTEX-TSE9-0011-R5A-SM-3DB7J 109.5
GTEX-12WSB-0011-R5b-SM-5GU67 109.3
GTEX-Z93S-0011-R5b-SM-4RGNI 109.1
GTEX-132Q8-0011-R5a-SM-5IJDM 108.7
GTEX-12WSF-0011-R5a-SM-5HL8K 108.6
GTEX-13SLX-0011-R5a-SM-5O9BV 108.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 108.2
GTEX-13X6I-0011-R5a-SM-5PNWW 107.9
GTEX-11GSP-0011-R5a-SM-57WBE 106.9
GTEX-12WSA-0011-R5b-SM-5GU5I 106.7
GTEX-13O3O-0011-R5b-SM-5KM44 106.5
GTEX-13OVL-0011-R5b-SM-5L3FU 105.4
GTEX-T5JC-0011-R5A-SM-32PLK 103.5
GTEX-QMR6-0011-R5A-SM-32PKT 103.4
GTEX-R55E-0011-R5A-SM-2TC5N 103.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 101.0
GTEX-X4XX-0011-R5A-SM-46MWN 100.6
GTEX-13FLW-0011-R5a-SM-5LZX6 98.8
GTEX-RU72-0011-R5A-SM-2TF6U 98.3
GTEX-13JUV-0011-R5a-SM-5LZY5 96.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 95.6
GTEX-13S7M-0011-R5b-SM-5P9HS 94.0
GTEX-13NYB-0011-R5a-SM-5MR45 93.5
GTEX-13FLV-0011-R5a-SM-5LZWT 93.4
GTEX-13NYS-0011-R5a-SM-5MR4D 92.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 92.6
GTEX-13CZV-0011-R5a-SM-5K7XA 91.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 88.0
GTEX-XMD1-0011-R5A-SM-4AT47 86.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 85.5
GTEX-13OVH-0011-R5b-SM-5KM4L 85.2
GTEX-13OW7-0011-R5b-SM-5O9DM 85.2
GTEX-RVPV-0011-R5A-SM-2TF69 83.4
GTEX-NL4W-0011-R5a-SM-2I3GD 83.3
GTEX-13OW5-0011-R5b-SM-5L3FR 80.6
GTEX-ZE7O-0011-R5a-SM-57WBO 80.2
GTEX-12WSD-0011-R5b-SM-5CVNG 77.7
GTEX-RVPU-0011-R5A-SM-2XCAD 77.7
GTEX-OHPN-0011-R5A-SM-2I5FF 77.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 76.7
GTEX-13JVG-0011-R5a-SM-5MR4O 75.3
GTEX-NL3H-0011-R5a-SM-2I3GB 74.3
GTEX-YFC4-0011-R5a-SM-4RGLR 74.1
GTEX-12ZZX-0011-R5a-SM-5HL89 72.3
GTEX-14BIN-0011-R5b-SM-5SI78 72.2
GTEX-ZXG5-0011-R5b-SM-57WBN 68.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 68.0
GTEX-XOTO-0011-R5A-SM-4B657 65.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 64.3
GTEX-NPJ7-0011-R5a-SM-33HBK 62.7
GTEX-11WQC-0011-R5a-SM-5BC74 61.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 60.5
GTEX-12WSH-0011-R5b-SM-5P9F3 57.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 57.6
GTEX-144GO-0011-R5a-SM-5PNUR 57.5
GTEX-OXRN-0011-R5A-SM-2I5EF 56.7
GTEX-13CIG-0011-R5b-SM-5L3F2 51.8
GTEX-139TS-0011-R5b-SM-5J2MZ 51.6
GTEX-X261-0011-R5A-SM-3NMB4 51.3
GTEX-1445S-0011-R5a-SM-5PNUS 50.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 46.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 45.8
GTEX-13112-0011-R5b-SM-5DUV8 45.7
GTEX-ZV68-0011-R5a-SM-4YCDW 45.7
GTEX-ZVT3-0011-R5a-SM-51MSI 44.4
GTEX-139T8-0011-R5b-SM-5J1MO 41.3
GTEX-144GL-0011-R5b-SM-5PNUJ 40.9
GTEX-YJ89-0011-R5a-SM-4V6GM 38.5
GTEX-13FHP-0011-R5b-SM-5LZY2 35.6
GTEX-S7PM-0011-R5A-SM-3NM8G 31.5
GTEX-1477Z-0011-R5b-SM-5PNUO 31.0
GTEX-13CF2-0011-R5a-SM-5LZWS 30.5
GTEX-11UD1-0011-R5b-SM-5P9FP 29.1
GTEX-145MG-0011-R5b-SM-5S2VU 20.7
GTEX-13NZA-0011-R5b-SM-5KM4K 19.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

433.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 433.4
FF:10164-103B2 76 years, female 464.9
FF:10379-105H1 89 years, female 401.9

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