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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1033.6TPM
GTEx:195.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:High
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA015649

 

Antibody HPA015650

 

Endothelial cells

Not detected   Not detected  

Glial cells

Low   High  

Neuronal cells

High   High  

Neuropil

High   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1033.6

N/A Male, age 5
Sample 1
TPM: 1144.5
overview Female, age 40
Sample 2
TPM: 683.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1272.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

195.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 164.5
Samples: 114

Max RPKM: 323.8
Min RPKM: 45.5
Std RPKM: 54.2
Median RPKM: 166.8
GTEX-PVOW-2526-SM-2XCF7 323.8
GTEX-WVLH-3026-SM-3MJG9 263.8
GTEX-T5JC-2426-SM-3NMDB 260.3
GTEX-11DXY-3226-SM-5GIDE 249.7
GTEX-WL46-2926-SM-3LK82 248.7
GTEX-13NYC-2826-SM-5K7WR 244.7
GTEX-WZTO-2926-SM-3NM9I 243.9
GTEX-14BMV-3026-SM-5S2PQ 241.9
GTEX-WWYW-3126-SM-3NB39 241.0
GTEX-T2IS-3026-SM-32QPM 238.5
GTEX-UTHO-3026-SM-3GAFB 234.8
GTEX-145MH-3026-SM-5Q5DZ 226.5
GTEX-XLM4-3026-SM-4AT6L 226.5
GTEX-WHSE-3026-SM-3P5ZH 226.3
GTEX-QMR6-1426-SM-32PLA 224.6
GTEX-TSE9-3026-SM-3DB76 223.8
GTEX-RNOR-2326-SM-2TF4I 223.2
GTEX-14ASI-3026-SM-5S2PN 216.1
GTEX-ZAK1-3026-SM-5S2MJ 216.1
GTEX-T6MN-2626-SM-32PMQ 214.9
GTEX-13FHO-3026-SM-5J1O9 214.4
GTEX-12ZZX-2926-SM-5GCOQ 213.4
GTEX-Y8DK-0826-SM-4TT3T 211.4
GTEX-11ZUS-2926-SM-5FQSL 211.2
GTEX-13FLW-1426-SM-5K7YE 210.6
GTEX-1313W-3126-SM-5LZUI 210.4
GTEX-11NUK-2926-SM-5A5MD 209.3
GTEX-Z93S-2926-SM-57WB9 208.5
GTEX-X585-3026-SM-46MWF 207.0
GTEX-X4XX-3026-SM-3NMB2 206.4
GTEX-131YS-3126-SM-5KLYT 204.3
GTEX-11PRG-2926-SM-5987A 202.1
GTEX-13VXU-2926-SM-5LU5C 200.7
GTEX-145LS-3126-SM-5Q5BY 200.5
GTEX-ZUA1-3026-SM-59HJC 200.4
GTEX-QVJO-1426-SM-2S1QY 198.4
GTEX-YFC4-3126-SM-5PNV6 198.2
GTEX-111FC-3126-SM-5GZZ2 197.1
GTEX-13OW6-3026-SM-5J2MI 196.5
GTEX-117XS-3026-SM-5N9CA 195.3
GTEX-12WSC-3026-SM-5GCNF 193.6
GTEX-13FXS-3126-SM-5J2NN 190.8
GTEX-11DXW-1126-SM-5H12Q 187.4
GTEX-132Q8-3026-SM-5PNVG 187.3
GTEX-13SLX-3126-SM-5S2Q5 186.8
GTEX-ZYFD-3026-SM-5E44C 186.0
GTEX-13O3Q-2926-SM-5KM45 185.5
GTEX-145MG-3026-SM-5RQJA 181.1
GTEX-13OVH-3026-SM-5MR4N 179.6
GTEX-12126-1026-SM-5P9JJ 178.0
GTEX-13NYS-3126-SM-5KLYV 177.9
GTEX-1399T-3026-SM-5KLZC 172.8
GTEX-1192X-3126-SM-5N9BY 170.7
GTEX-145MF-2726-SM-5O995 169.0
GTEX-144GL-3026-SM-5Q5CW 168.4
GTEX-R55F-1326-SM-5S2V4 167.9
GTEX-13O3O-3126-SM-5KM3H 167.0
GTEX-XOTO-3026-SM-4B65M 166.6
GTEX-13FHP-3026-SM-5IJBS 164.1
GTEX-12ZZZ-3026-SM-5BC67 162.8
GTEX-QDT8-2926-SM-32PKC 162.3
GTEX-ZVT3-3026-SM-5E43N 160.4
GTEX-14A5I-2926-SM-5Q5CQ 160.2
GTEX-12WSH-3026-SM-5CVNI 159.8
GTEX-12ZZY-3026-SM-5GCOU 159.3
GTEX-13NYB-3026-SM-5IJD7 157.5
GTEX-11GSO-2926-SM-5HL73 155.3
GTEX-YJ89-3026-SM-5IFJI 155.0
GTEX-Y111-2726-SM-4TT3N 154.1
GTEX-1128S-2726-SM-5H12C 152.5
GTEX-13PL6-3126-SM-5LUAR 151.7
GTEX-13X6J-3026-SM-5Q5CU 150.4
GTEX-QVUS-2826-SM-3GADB 148.2
GTEX-Q2AG-2926-SM-2HMJ3 147.8
GTEX-RU72-3026-SM-5SI7Y 144.2
GTEX-13OW8-2826-SM-5L3GC 144.1
GTEX-NPJ8-1526-SM-2D7VU 142.4
GTEX-11ONC-2926-SM-5P9JM 140.1
GTEX-OXRN-2426-SM-2I5EQ 140.1
GTEX-13QIC-2926-SM-5J2NF 137.5
GTEX-11GS4-3126-SM-5A5LH 133.9
GTEX-12ZZW-2926-SM-5LZUP 124.3
GTEX-ZE7O-3126-SM-5HL5X 120.4
GTEX-11EI6-3026-SM-5GZZO 119.9
GTEX-13G51-3026-SM-5IJB8 119.3
GTEX-NPJ7-2726-SM-2I3FT 119.1
GTEX-11OC5-0726-SM-5P9JK 118.5
GTEX-11O72-2926-SM-5BC4V 117.2
GTEX-13S7M-3126-SM-5RQJQ 115.0
GTEX-13X6K-2926-SM-5Q5D5 113.2
GTEX-11WQK-3026-SM-5EQL6 112.6
GTEX-ZAJG-3126-SM-5HL9J 110.7
GTEX-ZZPT-3026-SM-5GZXH 110.0
GTEX-131XW-3126-SM-5LZUC 105.1
GTEX-11EMC-3226-SM-5EGKW 104.7
GTEX-N7MT-1126-SM-5SI7V 99.5
GTEX-13OW7-3026-SM-5L3GY 98.9
GTEX-13OVJ-2826-SM-5L3GW 98.0
GTEX-13JVG-3126-SM-5L3FH 97.2
GTEX-139T8-1026-SM-5J2MC 94.3
GTEX-1117F-3226-SM-5N9CT 93.3
GTEX-13PVQ-3026-SM-5SI93 86.9
GTEX-147GR-3026-SM-5S2ML 84.5
GTEX-12WSD-3126-SM-5HL7P 84.0
GTEX-PWO3-0926-SM-2I5EY 83.0
GTEX-144FL-3026-SM-5O99C 82.6
GTEX-11OF3-2926-SM-5HL78 80.2
GTEX-13JUV-2926-SM-5LZX7 78.2
GTEX-11TTK-2926-SM-5PNYP 76.2
GTEX-11GSP-3226-SM-5986O 76.1
GTEX-13IVO-2926-SM-5L3CZ 74.3
GTEX-11NV4-2126-SM-5N9DS 64.6
GTEX-1445S-3026-SM-5O9BR 59.9
GTEX-12WSA-2926-SM-5EQ4D 45.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 227.1
Samples: 108

Max RPKM: 382.7
Min RPKM: 51.7
Std RPKM: 88
Median RPKM: 252
GTEX-T6MN-0011-R10A-SM-32QP7 382.7
GTEX-12WSE-0011-R10b-SM-5P9JV 371.1
GTEX-WVLH-0011-R10A-SM-3MJFM 370.9
GTEX-WL46-0011-R10A-SM-3MJFQ 368.3
GTEX-X585-0011-R10A-SM-46MUY 356.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 347.1
GTEX-S7SE-0011-R10A-SM-2XCDF 345.0
GTEX-WWYW-0011-R10A-SM-3NB35 344.8
GTEX-145MG-0011-R10a-SM-5PNWG 342.6
GTEX-145MH-0011-R10b-SM-5PNUK 338.0
GTEX-WZTO-0011-R10B-SM-4E3KB 335.7
GTEX-QDT8-0011-R10A-SM-32PKG 333.6
GTEX-12WSC-0011-R10a-SM-5GU57 332.5
GTEX-1313W-0011-R10b-SM-5DUXA 323.7
GTEX-13O3Q-0011-R10b-SM-5KM39 321.2
GTEX-YFC4-0011-R10a-SM-4SOK5 320.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 318.3
GTEX-14BIN-0011-R10a-SM-5S2UA 316.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 311.4
GTEX-NL3H-0011-R10A-SM-2I3E9 307.1
GTEX-X4XX-0011-R10B-SM-46MWO 302.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 301.2
GTEX-131XH-0011-R10a-SM-5EGLJ 300.8
GTEX-T5JC-0011-R10A-SM-32PM2 299.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 297.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 295.0
GTEX-13X6K-0011-R10a-SM-5P9JR 291.9
GTEX-QMR6-0011-R10A-SM-32PKO 291.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 291.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 287.4
GTEX-12WSF-0011-R10a-SM-5LZVH 287.2
GTEX-13S7M-0011-R10b-SM-5PNZB 283.2
GTEX-13X6J-0011-R10b-SM-5PNWA 282.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 279.4
GTEX-XLM4-0011-R10A-SM-4AT5P 278.6
GTEX-QVUS-0011-R10A-SM-3GIK3 278.3
GTEX-13CZV-0011-R10b-SM-5LZYD 277.1
GTEX-13SLX-0011-R10a-SM-5P9HV 274.6
GTEX-131YS-0011-R10b-SM-5EQ5N 272.8
GTEX-13NYS-0011-R10a-SM-5MR4S 269.6
GTEX-12WSH-0011-R10a-SM-5LZUS 269.0
GTEX-13FLW-0011-R10b-SM-5LZZF 268.2
GTEX-13QIC-0011-R10a-SM-5O9C7 268.2
GTEX-13O3O-0011-R10a-SM-5LUA9 267.9
GTEX-YJ89-0011-R10a-SM-4SOK9 265.6
GTEX-145LS-0011-R10a-SM-5PNUQ 263.4
GTEX-N7MS-0011-R10A-SM-2HMJK 263.0
GTEX-11H98-0011-R10b-SM-5NQ98 261.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 259.6
GTEX-13FHO-0011-R10b-SM-5J2MM 259.1
GTEX-13OW7-0011-R10a-SM-5L3H3 256.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 254.9
GTEX-12WSM-0011-R10a-SM-5DUWV 254.2
GTEX-13N1W-0011-R10b-SM-5MR4H 253.1
GTEX-13X6I-0011-R10a-SM-5PNWI 250.8
GTEX-13FXS-0011-R10a-SM-5J2MA 250.4
GTEX-ZF28-0011-R10a-SM-4WWEH 249.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 247.0
GTEX-147GR-0011-R10b-SM-5S2UM 244.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 237.7
GTEX-13NYB-0011-R10a-SM-5KM43 231.3
GTEX-Z93S-0011-R10a-SM-4RGNM 226.9
GTEX-X4EP-0011-R10B-SM-4QASJ 224.4
GTEX-13OVL-0011-R10a-SM-5L3GS 222.9
GTEX-13OW6-0011-R10a-SM-5L3HE 220.6
GTEX-14BIL-0011-R10a-SM-5SI75 218.5
GTEX-N7MT-0011-R10A-SM-2I3E1 217.6
GTEX-P44H-0011-R10A-SM-2XCEK 212.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 208.7
GTEX-12126-0011-R10b-SM-5BC6T 200.4
GTEX-TSE9-0011-R10A-SM-3DB7O 197.4
GTEX-13QJC-0011-R10a-SM-5SI63 191.0
GTEX-ZVT3-0011-R10b-SM-57WB6 189.1
GTEX-13G51-0011-R10b-SM-5LZYF 188.4
GTEX-OXRN-0011-R10A-SM-2I5GC 185.9
GTEX-147F4-0011-R10b-SM-5S2WC 176.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 175.4
GTEX-ZUA1-0011-R10a-SM-51MT6 173.3
GTEX-13JUV-0011-R10b-SM-5LZXR 166.2
GTEX-13OW8-0011-R10a-SM-5L3H6 166.1
GTEX-145LU-0011-R10a-SM-5PNWJ 161.3
GTEX-RVPU-0011-R10A-SM-2XCAH 145.2
GTEX-13SLW-0011-R10a-SM-5S2UI 144.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 142.9
GTEX-12WSD-0011-R10b-SM-5GU79 132.1
GTEX-11ZUS-0011-R10b-SM-5BC79 130.0
GTEX-11WQK-0011-R10a-SM-5BC6R 119.6
GTEX-11WQC-0011-R10a-SM-57WCT 118.5
GTEX-139TS-0011-R10a-SM-5K7TU 118.4
GTEX-ZXG5-0011-R10a-SM-57WDD 113.3
GTEX-13N2G-0011-R10a-SM-5MR34 111.1
GTEX-XMD1-0011-R10A-SM-4AT4A 110.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 108.7
GTEX-NL4W-0011-R10A-SM-2I3DY 105.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 103.5
GTEX-X261-0011-R10B-SM-4E3JT 97.5
GTEX-OXRO-0011-R10A-SM-2I5EH 97.0
GTEX-13NZA-0011-R10b-SM-5KM54 92.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 88.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 87.3
GTEX-12WSA-0011-R10b-SM-5P9ET 78.1
GTEX-13JVG-0011-R10b-SM-5KM2P 77.1
GTEX-14753-0011-R10b-SM-5S2WE 75.9
GTEX-1445S-0011-R10a-SM-5PNWB 74.0
GTEX-13IVO-0011-R10a-SM-5LZY3 61.0
GTEX-1477Z-0011-R10b-SM-5S2RF 60.7
GTEX-131XW-0011-R10a-SM-5DUVA 57.7
GTEX-ZV68-0011-R10a-SM-51MT7 51.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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