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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:79.5TPM
GTEx:25.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:Low
Neuropil:Low
 

Antibody staining

Antibody HPA030437

 

Endothelial cells

Medium  

Glial cells

Low  

Neuronal cells

Low  

Neuropil

Low  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

79.5

N/A Male, age 5
Sample 1
TPM: 82.4
overview Female, age 40
Sample 2
TPM: 30.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 126.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

25.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 26.4
Samples: 114

Max RPKM: 119.5
Min RPKM: 5
Std RPKM: 13.5
Median RPKM: 26
GTEX-11OF3-2926-SM-5HL78 119.5
GTEX-13FXS-3126-SM-5J2NN 59.0
GTEX-X585-3026-SM-46MWF 48.4
GTEX-WHSE-3026-SM-3P5ZH 46.0
GTEX-WL46-2926-SM-3LK82 45.7
GTEX-13SLX-3126-SM-5S2Q5 45.1
GTEX-13VXU-2926-SM-5LU5C 42.7
GTEX-1313W-3126-SM-5LZUI 41.7
GTEX-PVOW-2526-SM-2XCF7 41.2
GTEX-T5JC-2426-SM-3NMDB 41.1
GTEX-TSE9-3026-SM-3DB76 39.1
GTEX-11ZUS-2926-SM-5FQSL 38.5
GTEX-T6MN-2626-SM-32PMQ 38.3
GTEX-RNOR-2326-SM-2TF4I 38.1
GTEX-13FLW-1426-SM-5K7YE 37.3
GTEX-12ZZX-2926-SM-5GCOQ 36.6
GTEX-12126-1026-SM-5P9JJ 36.3
GTEX-XOTO-3026-SM-4B65M 36.2
GTEX-YFC4-3126-SM-5PNV6 36.1
GTEX-13OVH-3026-SM-5MR4N 35.8
GTEX-ZUA1-3026-SM-59HJC 35.1
GTEX-ZYFD-3026-SM-5E44C 35.1
GTEX-145MH-3026-SM-5Q5DZ 34.4
GTEX-14BMV-3026-SM-5S2PQ 34.2
GTEX-Z93S-2926-SM-57WB9 34.2
GTEX-117XS-3026-SM-5N9CA 34.1
GTEX-11DXY-3226-SM-5GIDE 34.1
GTEX-14ASI-3026-SM-5S2PN 33.8
GTEX-WVLH-3026-SM-3MJG9 33.7
GTEX-145MF-2726-SM-5O995 33.2
GTEX-12WSC-3026-SM-5GCNF 32.2
GTEX-13NYS-3126-SM-5KLYV 32.1
GTEX-13O3O-3126-SM-5KM3H 31.8
GTEX-WWYW-3126-SM-3NB39 31.6
GTEX-145LS-3126-SM-5Q5BY 31.3
GTEX-X4XX-3026-SM-3NMB2 31.3
GTEX-13O3Q-2926-SM-5KM45 30.9
GTEX-WZTO-2926-SM-3NM9I 30.8
GTEX-13OW6-3026-SM-5J2MI 30.3
GTEX-ZAJG-3126-SM-5HL9J 30.1
GTEX-T2IS-3026-SM-32QPM 30.0
GTEX-11PRG-2926-SM-5987A 29.0
GTEX-QVJO-1426-SM-2S1QY 29.0
GTEX-111FC-3126-SM-5GZZ2 28.5
GTEX-YJ89-3026-SM-5IFJI 28.4
GTEX-12ZZY-3026-SM-5GCOU 28.2
GTEX-13OW8-2826-SM-5L3GC 28.1
GTEX-Q2AG-2926-SM-2HMJ3 27.7
GTEX-11ONC-2926-SM-5P9JM 27.6
GTEX-13NYC-2826-SM-5K7WR 27.5
GTEX-UTHO-3026-SM-3GAFB 27.5
GTEX-13FHO-3026-SM-5J1O9 27.4
GTEX-1128S-2726-SM-5H12C 27.0
GTEX-11GSO-2926-SM-5HL73 26.8
GTEX-NPJ8-1526-SM-2D7VU 26.8
GTEX-11DXW-1126-SM-5H12Q 26.7
GTEX-XLM4-3026-SM-4AT6L 26.0
GTEX-Y111-2726-SM-4TT3N 26.0
GTEX-12WSH-3026-SM-5CVNI 25.6
GTEX-OXRN-2426-SM-2I5EQ 25.1
GTEX-13NYB-3026-SM-5IJD7 25.0
GTEX-144GL-3026-SM-5Q5CW 25.0
GTEX-132Q8-3026-SM-5PNVG 24.3
GTEX-QMR6-1426-SM-32PLA 24.2
GTEX-11OC5-0726-SM-5P9JK 24.0
GTEX-1399T-3026-SM-5KLZC 24.0
GTEX-Y8DK-0826-SM-4TT3T 23.6
GTEX-145MG-3026-SM-5RQJA 23.5
GTEX-ZAK1-3026-SM-5S2MJ 23.4
GTEX-12ZZZ-3026-SM-5BC67 23.3
GTEX-R55F-1326-SM-5S2V4 23.1
GTEX-11NUK-2926-SM-5A5MD 22.8
GTEX-13FHP-3026-SM-5IJBS 22.7
GTEX-ZVT3-3026-SM-5E43N 22.5
GTEX-11GS4-3126-SM-5A5LH 22.4
GTEX-1192X-3126-SM-5N9BY 21.9
GTEX-11O72-2926-SM-5BC4V 21.5
GTEX-13PL6-3126-SM-5LUAR 20.8
GTEX-QVUS-2826-SM-3GADB 20.6
GTEX-13X6J-3026-SM-5Q5CU 20.0
GTEX-13QIC-2926-SM-5J2NF 19.8
GTEX-NPJ7-2726-SM-2I3FT 19.6
GTEX-14A5I-2926-SM-5Q5CQ 19.5
GTEX-QDT8-2926-SM-32PKC 18.7
GTEX-131YS-3126-SM-5KLYT 18.0
GTEX-ZZPT-3026-SM-5GZXH 17.3
GTEX-RU72-3026-SM-5SI7Y 16.7
GTEX-144FL-3026-SM-5O99C 16.2
GTEX-12ZZW-2926-SM-5LZUP 16.0
GTEX-13S7M-3126-SM-5RQJQ 15.6
GTEX-11EMC-3226-SM-5EGKW 15.0
GTEX-13JUV-2926-SM-5LZX7 14.8
GTEX-1117F-3226-SM-5N9CT 14.7
GTEX-11EI6-3026-SM-5GZZO 14.0
GTEX-13OW7-3026-SM-5L3GY 14.0
GTEX-N7MT-1126-SM-5SI7V 14.0
GTEX-11WQK-3026-SM-5EQL6 13.9
GTEX-147GR-3026-SM-5S2ML 13.4
GTEX-11NV4-2126-SM-5N9DS 12.3
GTEX-12WSD-3126-SM-5HL7P 12.2
GTEX-131XW-3126-SM-5LZUC 12.1
GTEX-13OVJ-2826-SM-5L3GW 12.1
GTEX-13JVG-3126-SM-5L3FH 12.0
GTEX-13PVQ-3026-SM-5SI93 12.0
GTEX-139T8-1026-SM-5J2MC 11.8
GTEX-13G51-3026-SM-5IJB8 10.7
GTEX-ZE7O-3126-SM-5HL5X 10.5
GTEX-13X6K-2926-SM-5Q5D5 9.7
GTEX-13IVO-2926-SM-5L3CZ 8.8
GTEX-11GSP-3226-SM-5986O 8.0
GTEX-11TTK-2926-SM-5PNYP 7.5
GTEX-PWO3-0926-SM-2I5EY 7.2
GTEX-1445S-3026-SM-5O9BR 5.1
GTEX-12WSA-2926-SM-5EQ4D 5.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 23.9
Samples: 108

Max RPKM: 44.4
Min RPKM: 2.6
Std RPKM: 11.3
Median RPKM: 25.4
GTEX-NL3H-0011-R10A-SM-2I3E9 44.4
GTEX-13QJC-0011-R10a-SM-5SI63 44.0
GTEX-12WSE-0011-R10b-SM-5P9JV 43.4
GTEX-X585-0011-R10A-SM-46MUY 42.9
GTEX-13SLX-0011-R10a-SM-5P9HV 41.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 41.8
GTEX-WL46-0011-R10A-SM-3MJFQ 39.9
GTEX-WZTO-0011-R10B-SM-4E3KB 39.6
GTEX-145MH-0011-R10b-SM-5PNUK 39.5
GTEX-1313W-0011-R10b-SM-5DUXA 39.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 38.5
GTEX-T6MN-0011-R10A-SM-32QP7 38.5
GTEX-13N1W-0011-R10b-SM-5MR4H 38.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 37.8
GTEX-131XH-0011-R10a-SM-5EGLJ 37.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 37.1
GTEX-WVLH-0011-R10A-SM-3MJFM 36.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 36.2
GTEX-S7SE-0011-R10A-SM-2XCDF 35.9
GTEX-145MG-0011-R10a-SM-5PNWG 35.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 35.6
GTEX-X4XX-0011-R10B-SM-46MWO 35.2
GTEX-13CZV-0011-R10b-SM-5LZYD 34.6
GTEX-YFC4-0011-R10a-SM-4SOK5 33.4
GTEX-12WSF-0011-R10a-SM-5LZVH 32.8
GTEX-13O3Q-0011-R10b-SM-5KM39 32.7
GTEX-13OW7-0011-R10a-SM-5L3H3 32.4
GTEX-13NYS-0011-R10a-SM-5MR4S 32.3
GTEX-13X6K-0011-R10a-SM-5P9JR 32.1
GTEX-N7MS-0011-R10A-SM-2HMJK 32.1
GTEX-13QIC-0011-R10a-SM-5O9C7 31.7
GTEX-WWYW-0011-R10A-SM-3NB35 31.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 31.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 30.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 30.7
GTEX-ZF28-0011-R10a-SM-4WWEH 30.6
GTEX-T5JC-0011-R10A-SM-32PM2 30.3
GTEX-13X6J-0011-R10b-SM-5PNWA 30.1
GTEX-13S7M-0011-R10b-SM-5PNZB 29.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 29.7
GTEX-12WSM-0011-R10a-SM-5DUWV 29.4
GTEX-13OVL-0011-R10a-SM-5L3GS 29.3
GTEX-13O3O-0011-R10a-SM-5LUA9 28.5
GTEX-12WSC-0011-R10a-SM-5GU57 28.4
GTEX-13FXS-0011-R10a-SM-5J2MA 28.4
GTEX-11H98-0011-R10b-SM-5NQ98 28.3
GTEX-13FLW-0011-R10b-SM-5LZZF 28.3
GTEX-147GR-0011-R10b-SM-5S2UM 28.1
GTEX-N7MT-0011-R10A-SM-2I3E1 27.8
GTEX-145LS-0011-R10a-SM-5PNUQ 27.5
GTEX-14BIN-0011-R10a-SM-5S2UA 27.2
GTEX-XLM4-0011-R10A-SM-4AT5P 26.4
GTEX-13NYB-0011-R10a-SM-5KM43 25.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 25.6
GTEX-12WSH-0011-R10a-SM-5LZUS 25.2
GTEX-YJ89-0011-R10a-SM-4SOK9 24.5
GTEX-QVUS-0011-R10A-SM-3GIK3 23.8
GTEX-13FHO-0011-R10b-SM-5J2MM 23.7
GTEX-14BIL-0011-R10a-SM-5SI75 23.6
GTEX-TSE9-0011-R10A-SM-3DB7O 23.5
GTEX-QDT8-0011-R10A-SM-32PKG 22.1
GTEX-13X6I-0011-R10a-SM-5PNWI 21.5
GTEX-Z93S-0011-R10a-SM-4RGNM 21.5
GTEX-13OW6-0011-R10a-SM-5L3HE 21.0
GTEX-OXRN-0011-R10A-SM-2I5GC 20.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 19.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 19.3
GTEX-X4EP-0011-R10B-SM-4QASJ 19.0
GTEX-13G51-0011-R10b-SM-5LZYF 18.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 18.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 18.0
GTEX-147F4-0011-R10b-SM-5S2WC 17.8
GTEX-12126-0011-R10b-SM-5BC6T 17.6
GTEX-QMR6-0011-R10A-SM-32PKO 17.6
GTEX-ZUA1-0011-R10a-SM-51MT6 17.6
GTEX-131YS-0011-R10b-SM-5EQ5N 17.2
GTEX-145LU-0011-R10a-SM-5PNWJ 17.2
GTEX-RVPU-0011-R10A-SM-2XCAH 16.9
GTEX-13OW8-0011-R10a-SM-5L3H6 16.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 16.6
GTEX-X261-0011-R10B-SM-4E3JT 16.4
GTEX-13JUV-0011-R10b-SM-5LZXR 15.3
GTEX-ZVT3-0011-R10b-SM-57WB6 14.3
GTEX-P44H-0011-R10A-SM-2XCEK 13.0
GTEX-13SLW-0011-R10a-SM-5S2UI 11.9
GTEX-11WQC-0011-R10a-SM-57WCT 11.2
GTEX-ZXG5-0011-R10a-SM-57WDD 11.2
GTEX-OXRO-0011-R10A-SM-2I5EH 10.7
GTEX-11ZUS-0011-R10b-SM-5BC79 10.2
GTEX-NL4W-0011-R10A-SM-2I3DY 10.1
GTEX-13NZA-0011-R10b-SM-5KM54 9.5
GTEX-11WQK-0011-R10a-SM-5BC6R 9.3
GTEX-XMD1-0011-R10A-SM-4AT4A 9.3
GTEX-13IVO-0011-R10a-SM-5LZY3 8.9
GTEX-13N2G-0011-R10a-SM-5MR34 8.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 8.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.4
GTEX-139TS-0011-R10a-SM-5K7TU 6.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 6.6
GTEX-12WSD-0011-R10b-SM-5GU79 6.0
GTEX-14753-0011-R10b-SM-5S2WE 5.6
GTEX-12WSA-0011-R10b-SM-5P9ET 5.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 5.4
GTEX-1477Z-0011-R10b-SM-5S2RF 5.2
GTEX-131XW-0011-R10a-SM-5DUVA 4.5
GTEX-13JVG-0011-R10b-SM-5KM2P 4.3
GTEX-ZV68-0011-R10a-SM-51MT7 4.0
GTEX-1445S-0011-R10a-SM-5PNWB 2.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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