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EMC7

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:68.3TPM
GTEx:31.1RPKM
FANTOM5:65.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA010029

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA010029

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

68.3
N/A Female, age 80
Sample 1
TPM: 71.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 59.8
N/A Female, age 57
Sample 3
TPM: 55.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 88.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 66.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

31.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 31.0
Samples: 350

Max RPKM: 59.1
Min RPKM: 18.6
Std RPKM: 5.1
Median RPKM: 30.3
GTEX-Y5V6-2526-SM-5IFJV 59.1
GTEX-11EMC-2826-SM-5PNY6 57.1
GTEX-Y3IK-2526-SM-4WWDM 51.1
GTEX-13O1R-0226-SM-5K7U5 46.2
GTEX-S7SF-1826-SM-3K2AD 45.7
GTEX-14BIL-0226-SM-5SI9E 43.4
GTEX-ZYVF-0226-SM-5GIEG 42.8
GTEX-11H98-0226-SM-5NQ89 42.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 31.3
Samples: 227

Max RPKM: 57.5
Min RPKM: 21.7
Std RPKM: 5.2
Median RPKM: 30.2
GTEX-Y5LM-0826-SM-4VDSW 57.5
GTEX-13X6H-1726-SM-5Q5EH 55.8
GTEX-1399S-1426-SM-5PNYQ 48.9
GTEX-11WQK-1526-SM-5EGKN 47.4
GTEX-13FH7-1926-SM-5J2OL 46.3
GTEX-132QS-0826-SM-5K7WV 46.0
GTEX-12696-1826-SM-5EGJS 44.5
GTEX-1128S-0926-SM-5GZZU 43.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

65.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 65.6
FF:10010-101C1 65,65,76 years, mixed 65.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.