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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.6TPM
GTEx:18.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA008208

 

Antibody HPA011389

 

Endothelial cells

Low   Not detected  

Glial cells

Not detected   Low  

Neuronal cells

High   High  

Neuropil

Medium   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

50.6

N/A Male, age 5
Sample 1
TPM: 46.6
overview Female, age 40
Sample 2
TPM: 39.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 66.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

18.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 15.6
Samples: 114

Max RPKM: 28.5
Min RPKM: 7.4
Std RPKM: 4
Median RPKM: 15.2
GTEX-PVOW-2526-SM-2XCF7 28.5
GTEX-UTHO-3026-SM-3GAFB 27.7
GTEX-QMR6-1426-SM-32PLA 24.4
GTEX-T2IS-3026-SM-32QPM 24.3
GTEX-RNOR-2326-SM-2TF4I 22.3
GTEX-WVLH-3026-SM-3MJG9 22.2
GTEX-TSE9-3026-SM-3DB76 22.0
GTEX-WL46-2926-SM-3LK82 21.8
GTEX-T5JC-2426-SM-3NMDB 21.4
GTEX-111FC-3126-SM-5GZZ2 20.8
GTEX-X4XX-3026-SM-3NMB2 20.8
GTEX-X585-3026-SM-46MWF 20.7
GTEX-ZAK1-3026-SM-5S2MJ 20.5
GTEX-11DXY-3226-SM-5GIDE 20.4
GTEX-YFC4-3126-SM-5PNV6 20.1
GTEX-145MH-3026-SM-5Q5DZ 19.9
GTEX-11O72-2926-SM-5BC4V 19.7
GTEX-Y8DK-0826-SM-4TT3T 19.6
GTEX-13FHO-3026-SM-5J1O9 19.5
GTEX-WZTO-2926-SM-3NM9I 19.5
GTEX-13NYC-2826-SM-5K7WR 19.4
GTEX-XLM4-3026-SM-4AT6L 19.3
GTEX-WHSE-3026-SM-3P5ZH 19.1
GTEX-13FLW-1426-SM-5K7YE 19.0
GTEX-13VXU-2926-SM-5LU5C 18.9
GTEX-WWYW-3126-SM-3NB39 18.9
GTEX-ZUA1-3026-SM-59HJC 18.9
GTEX-14ASI-3026-SM-5S2PN 18.6
GTEX-T6MN-2626-SM-32PMQ 18.4
GTEX-QDT8-2926-SM-32PKC 18.1
GTEX-11ZUS-2926-SM-5FQSL 18.0
GTEX-1313W-3126-SM-5LZUI 18.0
GTEX-13OVH-3026-SM-5MR4N 17.8
GTEX-12ZZX-2926-SM-5GCOQ 17.6
GTEX-14BMV-3026-SM-5S2PQ 17.6
GTEX-QVUS-2826-SM-3GADB 17.6
GTEX-13NYS-3126-SM-5KLYV 17.5
GTEX-12ZZZ-3026-SM-5BC67 17.3
GTEX-11NUK-2926-SM-5A5MD 17.2
GTEX-11PRG-2926-SM-5987A 17.2
GTEX-131YS-3126-SM-5KLYT 17.1
GTEX-12ZZY-3026-SM-5GCOU 16.9
GTEX-145LS-3126-SM-5Q5BY 16.8
GTEX-12WSC-3026-SM-5GCNF 16.6
GTEX-13FXS-3126-SM-5J2NN 16.3
GTEX-QVJO-1426-SM-2S1QY 16.3
GTEX-13O3Q-2926-SM-5KM45 16.2
GTEX-132Q8-3026-SM-5PNVG 16.0
GTEX-13OW6-3026-SM-5J2MI 15.8
GTEX-13SLX-3126-SM-5S2Q5 15.8
GTEX-13X6J-3026-SM-5Q5CU 15.7
GTEX-1128S-2726-SM-5H12C 15.6
GTEX-13FHP-3026-SM-5IJBS 15.6
GTEX-117XS-3026-SM-5N9CA 15.4
GTEX-13O3O-3126-SM-5KM3H 15.4
GTEX-145MG-3026-SM-5RQJA 15.3
GTEX-13PL6-3126-SM-5LUAR 15.2
GTEX-ZVT3-3026-SM-5E43N 15.2
GTEX-ZYFD-3026-SM-5E44C 15.2
GTEX-144GL-3026-SM-5Q5CW 15.1
GTEX-RU72-3026-SM-5SI7Y 15.1
GTEX-XOTO-3026-SM-4B65M 15.1
GTEX-145MF-2726-SM-5O995 14.8
GTEX-12WSH-3026-SM-5CVNI 14.7
GTEX-1399T-3026-SM-5KLZC 14.7
GTEX-13OW8-2826-SM-5L3GC 14.7
GTEX-1192X-3126-SM-5N9BY 14.6
GTEX-11GSO-2926-SM-5HL73 14.5
GTEX-13NYB-3026-SM-5IJD7 14.5
GTEX-Z93S-2926-SM-57WB9 14.5
GTEX-11DXW-1126-SM-5H12Q 14.3
GTEX-OXRN-2426-SM-2I5EQ 14.3
GTEX-R55F-1326-SM-5S2V4 14.1
GTEX-13G51-3026-SM-5IJB8 14.0
GTEX-Q2AG-2926-SM-2HMJ3 14.0
GTEX-14A5I-2926-SM-5Q5CQ 13.9
GTEX-12126-1026-SM-5P9JJ 13.8
GTEX-NPJ8-1526-SM-2D7VU 13.5
GTEX-11OF3-2926-SM-5HL78 13.4
GTEX-Y111-2726-SM-4TT3N 13.4
GTEX-YJ89-3026-SM-5IFJI 13.4
GTEX-13OW7-3026-SM-5L3GY 13.2
GTEX-11WQK-3026-SM-5EQL6 13.1
GTEX-13S7M-3126-SM-5RQJQ 13.1
GTEX-11ONC-2926-SM-5P9JM 13.0
GTEX-NPJ7-2726-SM-2I3FT 13.0
GTEX-11GS4-3126-SM-5A5LH 12.7
GTEX-ZAJG-3126-SM-5HL9J 12.7
GTEX-11EI6-3026-SM-5GZZO 12.3
GTEX-13OVJ-2826-SM-5L3GW 12.3
GTEX-13QIC-2926-SM-5J2NF 12.2
GTEX-13X6K-2926-SM-5Q5D5 12.1
GTEX-11OC5-0726-SM-5P9JK 11.7
GTEX-N7MT-1126-SM-5SI7V 11.6
GTEX-ZE7O-3126-SM-5HL5X 11.6
GTEX-11EMC-3226-SM-5EGKW 11.3
GTEX-ZZPT-3026-SM-5GZXH 11.3
GTEX-11NV4-2126-SM-5N9DS 11.2
GTEX-12ZZW-2926-SM-5LZUP 11.0
GTEX-13PVQ-3026-SM-5SI93 10.5
GTEX-147GR-3026-SM-5S2ML 10.5
GTEX-131XW-3126-SM-5LZUC 10.3
GTEX-13IVO-2926-SM-5L3CZ 10.3
GTEX-1117F-3226-SM-5N9CT 10.1
GTEX-13JVG-3126-SM-5L3FH 10.0
GTEX-144FL-3026-SM-5O99C 9.9
GTEX-11TTK-2926-SM-5PNYP 9.8
GTEX-139T8-1026-SM-5J2MC 9.7
GTEX-12WSD-3126-SM-5HL7P 9.2
GTEX-PWO3-0926-SM-2I5EY 9.2
GTEX-13JUV-2926-SM-5LZX7 8.7
GTEX-1445S-3026-SM-5O9BR 8.7
GTEX-11GSP-3226-SM-5986O 8.1
GTEX-12WSA-2926-SM-5EQ4D 7.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 22.0
Samples: 108

Max RPKM: 45.2
Min RPKM: 5.5
Std RPKM: 7.7
Median RPKM: 23
GTEX-QDT8-0011-R10A-SM-32PKG 45.2
GTEX-T6MN-0011-R10A-SM-32QP7 39.5
GTEX-WVLH-0011-R10A-SM-3MJFM 37.4
GTEX-WL46-0011-R10A-SM-3MJFQ 35.7
GTEX-145MH-0011-R10b-SM-5PNUK 35.5
GTEX-S7SE-0011-R10A-SM-2XCDF 34.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 33.6
GTEX-YFC4-0011-R10a-SM-4SOK5 33.6
GTEX-X585-0011-R10A-SM-46MUY 33.4
GTEX-WWYW-0011-R10A-SM-3NB35 33.3
GTEX-12WSE-0011-R10b-SM-5P9JV 33.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 30.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 29.6
GTEX-NL3H-0011-R10A-SM-2I3E9 29.5
GTEX-X4XX-0011-R10B-SM-46MWO 29.5
GTEX-12WSC-0011-R10a-SM-5GU57 28.8
GTEX-WZTO-0011-R10B-SM-4E3KB 28.8
GTEX-13O3Q-0011-R10b-SM-5KM39 28.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 28.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 28.0
GTEX-QMR6-0011-R10A-SM-32PKO 27.9
GTEX-145MG-0011-R10a-SM-5PNWG 27.8
GTEX-1313W-0011-R10b-SM-5DUXA 27.7
GTEX-131YS-0011-R10b-SM-5EQ5N 27.7
GTEX-14BIN-0011-R10a-SM-5S2UA 27.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 27.3
GTEX-13FHO-0011-R10b-SM-5J2MM 26.7
GTEX-13S7M-0011-R10b-SM-5PNZB 26.7
GTEX-12WSF-0011-R10a-SM-5LZVH 26.3
GTEX-T5JC-0011-R10A-SM-32PM2 26.3
GTEX-13X6K-0011-R10a-SM-5P9JR 26.1
GTEX-P44H-0011-R10A-SM-2XCEK 26.0
GTEX-XLM4-0011-R10A-SM-4AT5P 26.0
GTEX-QVUS-0011-R10A-SM-3GIK3 25.9
GTEX-N7MS-0011-R10A-SM-2HMJK 25.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 25.1
GTEX-12WSM-0011-R10a-SM-5DUWV 24.9
GTEX-131XH-0011-R10a-SM-5EGLJ 24.9
GTEX-145LS-0011-R10a-SM-5PNUQ 24.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 24.9
GTEX-YJ89-0011-R10a-SM-4SOK9 24.9
GTEX-11H98-0011-R10b-SM-5NQ98 24.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 24.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 24.4
GTEX-13X6I-0011-R10a-SM-5PNWI 24.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 24.3
GTEX-13X6J-0011-R10b-SM-5PNWA 24.2
GTEX-13QIC-0011-R10a-SM-5O9C7 24.1
GTEX-13FLW-0011-R10b-SM-5LZZF 24.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 23.7
GTEX-13OVL-0011-R10a-SM-5L3GS 23.7
GTEX-13FXS-0011-R10a-SM-5J2MA 23.4
GTEX-X4EP-0011-R10B-SM-4QASJ 23.4
GTEX-ZF28-0011-R10a-SM-4WWEH 23.2
GTEX-12126-0011-R10b-SM-5BC6T 22.8
GTEX-147GR-0011-R10b-SM-5S2UM 22.8
GTEX-13N1W-0011-R10b-SM-5MR4H 22.2
GTEX-13NYB-0011-R10a-SM-5KM43 22.2
GTEX-13CZV-0011-R10b-SM-5LZYD 22.1
GTEX-12WSH-0011-R10a-SM-5LZUS 21.8
GTEX-Z93S-0011-R10a-SM-4RGNM 21.6
GTEX-14BIL-0011-R10a-SM-5SI75 21.5
GTEX-13OW7-0011-R10a-SM-5L3H3 21.2
GTEX-N7MT-0011-R10A-SM-2I3E1 21.1
GTEX-ZUA1-0011-R10a-SM-51MT6 21.1
GTEX-TSE9-0011-R10A-SM-3DB7O 20.4
GTEX-13G51-0011-R10b-SM-5LZYF 20.0
GTEX-13OW8-0011-R10a-SM-5L3H6 20.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 19.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 19.7
GTEX-13SLX-0011-R10a-SM-5P9HV 19.5
GTEX-OXRN-0011-R10A-SM-2I5GC 19.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 19.2
GTEX-13NYS-0011-R10a-SM-5MR4S 19.1
GTEX-11ZUS-0011-R10b-SM-5BC79 19.0
GTEX-13O3O-0011-R10a-SM-5LUA9 18.3
GTEX-ZVT3-0011-R10b-SM-57WB6 17.8
GTEX-13N2G-0011-R10a-SM-5MR34 17.5
GTEX-13QJC-0011-R10a-SM-5SI63 17.2
GTEX-13JUV-0011-R10b-SM-5LZXR 16.1
GTEX-13OW6-0011-R10a-SM-5L3HE 16.1
GTEX-147F4-0011-R10b-SM-5S2WC 15.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 15.6
GTEX-139TS-0011-R10a-SM-5K7TU 15.5
GTEX-11WQK-0011-R10a-SM-5BC6R 14.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 14.4
GTEX-145LU-0011-R10a-SM-5PNWJ 14.1
GTEX-RVPU-0011-R10A-SM-2XCAH 14.1
GTEX-13SLW-0011-R10a-SM-5S2UI 13.9
GTEX-12WSD-0011-R10b-SM-5GU79 13.6
GTEX-XMD1-0011-R10A-SM-4AT4A 13.2
GTEX-ZXG5-0011-R10a-SM-57WDD 13.1
GTEX-NL4W-0011-R10A-SM-2I3DY 13.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 12.4
GTEX-X261-0011-R10B-SM-4E3JT 12.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 11.2
GTEX-11WQC-0011-R10a-SM-57WCT 11.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 10.9
GTEX-OXRO-0011-R10A-SM-2I5EH 10.4
GTEX-1445S-0011-R10a-SM-5PNWB 10.3
GTEX-13NZA-0011-R10b-SM-5KM54 9.5
GTEX-13JVG-0011-R10b-SM-5KM2P 9.0
GTEX-1477Z-0011-R10b-SM-5S2RF 8.9
GTEX-14753-0011-R10b-SM-5S2WE 8.7
GTEX-12WSA-0011-R10b-SM-5P9ET 8.5
GTEX-13IVO-0011-R10a-SM-5LZY3 8.2
GTEX-ZV68-0011-R10a-SM-51MT7 6.7
GTEX-131XW-0011-R10a-SM-5DUVA 5.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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