We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ROCK2
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.9TPM
GTEx:18.0RPKM
FANTOM5:23.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 
 

Antibody staining

Antibody HPA007459

 

Antibody CAB008666

 

Adipocytes

Not detected   Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium   Low  
      
   

BREAST - HPA RNA-seq

Average TPM

17.9

overview Female, age 52
Sample 1
TPM: 15.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 19.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 14.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 21.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

18.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 18.0
Samples: 214

Max RPKM: 73.1
Min RPKM: 2.8
Std RPKM: 11.5
Median RPKM: 14
GTEX-RUSQ-2026-SM-4GIAK 73.1
GTEX-13CF3-2126-SM-5IFJP 70.6
GTEX-YEC3-1026-SM-5IFI5 68.5
GTEX-14E6E-1326-SM-5S2NR 60.0
GTEX-ZZ64-1226-SM-5E43R 54.3
GTEX-11ZTT-2326-SM-5EQLG 51.5
GTEX-Y5V6-2126-SM-4WWFX 51.3
GTEX-ZT9W-2026-SM-51MRA 48.8
GTEX-R55D-0826-SM-48FEA 47.5
GTEX-ZDYS-1126-SM-5K7UB 46.4
GTEX-Y9LG-1426-SM-5IFJZ 44.4
GTEX-TKQ1-0226-SM-33HB5 44.1
GTEX-12WSN-1326-SM-5GCNT 39.9
GTEX-13O61-1826-SM-5KM4I 39.6
GTEX-12BJ1-1826-SM-5HL9N 39.5
GTEX-145ME-1526-SM-5Q5F2 37.3
GTEX-ZLFU-2126-SM-4WWEV 36.1
GTEX-ZA64-1526-SM-5CVMD 35.2
GTEX-13N1W-0626-SM-5MR4U 33.0
GTEX-ZQUD-1926-SM-51MSA 32.5
GTEX-11TUW-1826-SM-5BC5D 31.6
GTEX-ZQG8-0726-SM-5P9H9 31.6
GTEX-ZPIC-1126-SM-5BC7F 30.5
GTEX-13FTX-1126-SM-5N9EN 30.0
GTEX-REY6-2426-SM-48FF5 30.0
GTEX-PSDG-1626-SM-48TCQ 29.9
GTEX-ZDTT-2126-SM-5S2OJ 28.8
GTEX-11P82-1326-SM-5HL62 28.3
GTEX-12WSM-1726-SM-5BC6J 27.7
GTEX-ZV7C-1826-SM-5NQ83 27.7
GTEX-11WQK-2426-SM-5GU5C 27.2
GTEX-T6MO-0326-SM-32QOK 26.8
GTEX-WFON-1826-SM-3GILG 26.7
GTEX-YFCO-1826-SM-4W1YH 26.1
GTEX-13PVQ-1026-SM-5KM3M 25.3
GTEX-11I78-2226-SM-5PNYA 24.7
GTEX-ZVT4-1026-SM-57WC4 24.5
GTEX-14753-2426-SM-5LU8U 24.3
GTEX-Y114-2026-SM-4TT7L 23.8
GTEX-1211K-1926-SM-5EQLB 23.7
GTEX-S32W-2026-SM-4AD6E 22.8
GTEX-S4Q7-1126-SM-4AD6R 22.6
GTEX-YB5K-1626-SM-5IFIN 22.6
GTEX-117YX-1426-SM-5H12H 22.4
GTEX-UTHO-1026-SM-3GAF7 22.1
GTEX-X261-0626-SM-3NMD9 22.1
GTEX-1122O-1226-SM-5H113 21.8
GTEX-XGQ4-0926-SM-4AT4U 21.7
GTEX-ZV6S-1826-SM-5NQ8D 21.5
GTEX-Y8LW-1626-SM-5IFHX 21.4
GTEX-12WSK-2226-SM-5GCO5 21.0
GTEX-W5X1-2326-SM-3GIL6 20.7
GTEX-11LCK-2426-SM-5HL5F 20.5
GTEX-ZWKS-2826-SM-5NQ74 20.5
GTEX-13113-1726-SM-5GCOO 20.4
GTEX-XQ8I-2426-SM-4WAXY 20.3
GTEX-XUW1-2326-SM-4BOO5 20.0
GTEX-U412-1826-SM-4DXTJ 19.9
GTEX-ZF3C-2326-SM-5S2MZ 19.7
GTEX-TMMY-0726-SM-33HBE 19.5
GTEX-WXYG-2226-SM-4E3IM 19.3
GTEX-X4XY-0926-SM-4E3JD 18.9
GTEX-TKQ2-1826-SM-33HB2 18.8
GTEX-11EQ9-1826-SM-5Q5AJ 18.6
GTEX-R55F-1726-SM-2TF4R 18.6
GTEX-139T6-1626-SM-5PNYZ 18.2
GTEX-RWS6-1926-SM-47JXY 18.1
GTEX-XBED-1626-SM-47JYN 18.1
GTEX-145MN-1926-SM-5SIAI 18.0
GTEX-S4UY-0726-SM-4AD6X 18.0
GTEX-1314G-1226-SM-5BC6D 17.8
GTEX-ZLV1-1426-SM-4WWES 17.8
GTEX-Y3I4-1526-SM-4TT7K 17.7
GTEX-ZDXO-0126-SM-5S2ND 17.5
GTEX-13OW8-0226-SM-5K7UP 17.4
GTEX-133LE-1726-SM-5K7VQ 17.0
GTEX-12WSB-0626-SM-59HJO 16.9
GTEX-TML8-1226-SM-32QON 16.8
GTEX-144GL-2026-SM-5LU3O 16.6
GTEX-YJ8O-2226-SM-5IFHW 16.6
GTEX-QEL4-2126-SM-447AE 15.9
GTEX-111YS-1926-SM-5GICC 15.8
GTEX-11DZ1-0326-SM-5N9BN 15.7
GTEX-VJWN-0726-SM-3GIJ8 15.7
GTEX-ZUA1-1526-SM-59HLS 15.5
GTEX-1117F-2826-SM-5GZXL 15.3
GTEX-1399U-1826-SM-5PNZ1 15.3
GTEX-145MO-0826-SM-5NQBL 15.3
GTEX-WOFL-0826-SM-3MJG1 15.3
GTEX-XV7Q-2326-SM-4BRVZ 15.2
GTEX-R53T-1526-SM-48FEK 14.9
GTEX-YB5E-1726-SM-5IFJ3 14.9
GTEX-13OW5-2226-SM-5L3HC 14.8
GTEX-ZTX8-1226-SM-4YCE9 14.8
GTEX-117XS-1926-SM-5GICO 14.7
GTEX-146FH-0826-SM-5SI8T 14.7
GTEX-SE5C-2126-SM-4BRUJ 14.7
GTEX-ZF29-1926-SM-5S2P1 14.7
GTEX-1313W-0826-SM-5EQ4T 14.6
GTEX-S7SE-0826-SM-4AT4D 14.6
GTEX-T5JW-2026-SM-4DM63 14.6
GTEX-ZU9S-1926-SM-5NQBP 14.6
GTEX-13FTW-1426-SM-5LZWZ 14.5
GTEX-1192X-2326-SM-5987X 14.4
GTEX-ZYWO-2326-SM-5GZY4 14.4
GTEX-13W46-0826-SM-5LU3H 14.3
GTEX-T2YK-2226-SM-32QPT 14.1
GTEX-11P81-1926-SM-5BC53 13.9
GTEX-11DXY-2326-SM-5GICW 13.8
GTEX-WY7C-2726-SM-3NB3P 13.8
GTEX-13N11-1726-SM-5J1OJ 13.7
GTEX-U3ZH-1426-SM-4DXSR 13.7
GTEX-ZZPU-0626-SM-5E43T 13.6
GTEX-11OF3-1926-SM-59889 13.5
GTEX-S33H-0326-SM-4AD6N 13.4
GTEX-11ONC-2126-SM-5HL6E 13.3
GTEX-139TU-0626-SM-5KM3X 13.3
GTEX-WYJK-1326-SM-3NB2T 13.3
GTEX-Y5V5-2126-SM-4WWFO 13.3
GTEX-11O72-2126-SM-5N9FO 13.2
GTEX-QMRM-1626-SM-4R1KV 13.2
GTEX-UPK5-2326-SM-3P5Z8 13.2
GTEX-11NV4-2026-SM-5N9DG 13.0
GTEX-144GM-0926-SM-5O994 13.0
GTEX-QEG5-0726-SM-4R1JQ 13.0
GTEX-ZY6K-1626-SM-5GZWV 13.0
GTEX-11NSD-0926-SM-5N9DR 12.9
GTEX-13S86-1226-SM-5S2OA 12.9
GTEX-WRHU-0326-SM-3MJFY 12.9
GTEX-ZYW4-0826-SM-5GIDG 12.8
GTEX-XUJ4-1926-SM-4BOOV 12.7
GTEX-WI4N-1426-SM-3LK7H 12.6
GTEX-QDT8-0626-SM-48TYW 12.4
GTEX-S4P3-1326-SM-4AD6V 12.4
GTEX-ZYFC-0826-SM-5E44K 12.4
GTEX-UJHI-1426-SM-3DB9C 12.3
GTEX-Y8E4-1626-SM-5S2MW 12.3
GTEX-11GSO-1926-SM-5A5K3 12.2
GTEX-12KS4-0126-SM-5Q5A5 12.2
GTEX-11EI6-0626-SM-5985T 12.1
GTEX-WYBS-0926-SM-3NM94 12.1
GTEX-ZAB4-2526-SM-5HL8M 12.1
GTEX-ZYT6-0126-SM-5E45J 12.1
GTEX-13W3W-1226-SM-5LU4H 12.0
GTEX-XQ3S-1326-SM-4BOPQ 12.0
GTEX-Y111-2026-SM-4SOJA 12.0
GTEX-13QIC-2326-SM-5LU5N 11.9
GTEX-11DXW-0626-SM-5N9ER 11.8
GTEX-13NZ8-0126-SM-5IJCT 11.8
GTEX-ZVE2-1226-SM-5NQ8R 11.8
GTEX-147F4-2826-SM-5NQBN 11.7
GTEX-T2IS-1526-SM-32QPR 11.7
GTEX-XYKS-1326-SM-4BRUN 11.7
GTEX-ZEX8-2226-SM-57WC6 11.7
GTEX-139T8-0826-SM-5L3DE 11.6
GTEX-XOT4-0726-SM-4GIAW 11.6
GTEX-QVJO-1826-SM-447C9 11.5
GTEX-T6MN-0726-SM-32PML 11.5
GTEX-11ZUS-0826-SM-5FQUY 11.4
GTEX-U8XE-0826-SM-4E3J1 11.2
GTEX-WYVS-1726-SM-3NMAY 11.2
GTEX-XMD2-0926-SM-4WWEF 11.2
GTEX-11GS4-2126-SM-5A5KR 11.1
GTEX-RU72-0626-SM-46MUI 11.1
GTEX-Y5LM-1726-SM-4VDSX 11.1
GTEX-ZTTD-1026-SM-51MRD 11.1
GTEX-T5JC-2126-SM-32PMO 11.0
GTEX-Y3IK-2326-SM-4WWDT 11.0
GTEX-XMD1-0826-SM-4AT52 10.9
GTEX-132NY-0826-SM-5K7Y7 10.8
GTEX-11DXZ-1926-SM-5GZZL 10.7
GTEX-1269C-2426-SM-5FQSN 10.7
GTEX-S341-1526-SM-4AD6K 10.7
GTEX-ZVZQ-0826-SM-51MRF 10.6
GTEX-132AR-0826-SM-5EGK6 10.5
GTEX-Q2AG-0326-SM-48U1O 10.5
GTEX-11WQC-1726-SM-5GU4W 10.4
GTEX-13O3P-0826-SM-5L3DH 10.4
GTEX-13O3Q-2226-SM-5KM4O 10.4
GTEX-R3RS-0626-SM-48FE1 10.4
GTEX-ZF2S-2026-SM-5E461 10.4
GTEX-13O3O-0826-SM-5K7WE 10.1
GTEX-13D11-1026-SM-5IJFB 10.0
GTEX-U3ZN-1926-SM-4DXSG 10.0
GTEX-11EM3-1326-SM-5N9C6 9.8
GTEX-12ZZX-1126-SM-5EGKB 9.8
GTEX-13FTY-2226-SM-5J1ND 9.6
GTEX-VUSG-2226-SM-4KKZO 9.5
GTEX-X4EP-2926-SM-3P5YQ 9.5
GTEX-13NZ9-1026-SM-5MR5K 9.4
GTEX-132Q8-1426-SM-5EGK7 9.3
GTEX-11P7K-0726-SM-5EGKX 9.2
GTEX-13CF2-2026-SM-5K7VI 9.2
GTEX-XMK1-1126-SM-4IHJ8 9.2
GTEX-ZXES-0826-SM-5E43C 9.2
GTEX-SIU7-1626-SM-4BRUK 9.1
GTEX-11EMC-2026-SM-5A5JV 9.0
GTEX-X15G-1626-SM-3NMB3 9.0
GTEX-YFC4-1426-SM-5IFJG 9.0
GTEX-ZAJG-0626-SM-5HL8X 9.0
GTEX-ZVTK-0326-SM-51MRR 9.0
GTEX-13PL6-2926-SM-5L3I2 8.9
GTEX-11PRG-0826-SM-5EQ6A 8.6
GTEX-XUZC-1626-SM-4BRVP 8.5
GTEX-ZVT2-1826-SM-5NQ8W 8.4
GTEX-11TT1-2126-SM-5GU5Y 8.3
GTEX-ZC5H-2626-SM-5J2MG 8.0
GTEX-13FHO-0826-SM-5L3E8 7.6
GTEX-13NZB-2126-SM-5MR4Y 7.6
GTEX-145LT-0726-SM-5S2VM 6.8
GTEX-131YS-0626-SM-5EGKL 6.5
GTEX-131XW-0726-SM-5EGK3 6.3
GTEX-14AS3-1626-SM-5S2OY 4.7
GTEX-14ABY-2126-SM-5QGQZ 2.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

23.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 23.9
FF:10080-102A8 77 years, female 23.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.