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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:503.9TPM
GTEx:123.8RPKM
FANTOM5:390.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA011271

 

Antibody HPA011272

 

Antibody CAB013023

 

Antibody CAB035987

 

Antibody CAB058693

 

Adipocytes

Not detected   Not detected   Low   Medium   Not detected  

Glandular cells

Medium   Medium   High   Medium   Medium  

Myoepithelial cells

Low   Medium   Medium   High   High  
         
         
         

BREAST - HPA RNA-seq

Average TPM

503.9

overview Female, age 52
Sample 1
TPM: 601.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 963.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 227.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 223.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

123.8

GTEx sample id

RPKM

83.8105.7143.626.5230.6050100150200250300350400450
 
83.8105.7143.626.5230.6050100150200250300350400450

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 123.8
Samples: 214

Max RPKM: 470.5
Min RPKM: 26.5
Std RPKM: 64.8
Median RPKM: 105.7
GTEX-11TUW-1826-SM-5BC5D 470.5
GTEX-13S86-1226-SM-5S2OA 427.0
GTEX-TKQ1-0226-SM-33HB5 359.1
GTEX-RUSQ-2026-SM-4GIAK 326.9
GTEX-ZLFU-2126-SM-4WWEV 321.7
GTEX-U8XE-0826-SM-4E3J1 301.9
GTEX-T2IS-1526-SM-32QPR 295.6
GTEX-132AR-0826-SM-5EGK6 287.5
GTEX-S33H-0326-SM-4AD6N 285.9
GTEX-13PVQ-1026-SM-5KM3M 249.8
GTEX-11EQ9-1826-SM-5Q5AJ 246.2
GTEX-WFON-1826-SM-3GILG 237.7
GTEX-11NSD-0926-SM-5N9DR 236.7
GTEX-XQ8I-2426-SM-4WAXY 230.6
GTEX-13FTW-1426-SM-5LZWZ 226.2
GTEX-13N1W-0626-SM-5MR4U 226.2
GTEX-117XS-1926-SM-5GICO 216.5
GTEX-12WSN-1326-SM-5GCNT 216.0
GTEX-Y5V6-2126-SM-4WWFX 209.7
GTEX-ZYFC-0826-SM-5E44K 209.1
GTEX-132NY-0826-SM-5K7Y7 200.9
GTEX-11ZUS-0826-SM-5FQUY 200.6
GTEX-XOT4-0726-SM-4GIAW 200.3
GTEX-11ONC-2126-SM-5HL6E 199.0
GTEX-146FH-0826-SM-5SI8T 197.6
GTEX-YJ8O-2226-SM-5IFHW 197.2
GTEX-TKQ2-1826-SM-33HB2 194.9
GTEX-WY7C-2726-SM-3NB3P 188.8
GTEX-WRHU-0326-SM-3MJFY 188.4
GTEX-ZPIC-1126-SM-5BC7F 186.7
GTEX-13CF3-2126-SM-5IFJP 185.3
GTEX-14E6E-1326-SM-5S2NR 177.5
GTEX-13O3O-0826-SM-5K7WE 173.8
GTEX-ZVZQ-0826-SM-51MRF 173.1
GTEX-11WQK-2426-SM-5GU5C 172.4
GTEX-Y5V5-2126-SM-4WWFO 164.5
GTEX-Y114-2026-SM-4TT7L 161.7
GTEX-Y8E4-1626-SM-5S2MW 159.0
GTEX-ZV6S-1826-SM-5NQ8D 157.8
GTEX-1117F-2826-SM-5GZXL 156.7
GTEX-ZZPU-0626-SM-5E43T 153.7
GTEX-X4XY-0926-SM-4E3JD 152.8
GTEX-ZDYS-1126-SM-5K7UB 152.0
GTEX-13O3Q-2226-SM-5KM4O 151.7
GTEX-ZDTT-2126-SM-5S2OJ 151.4
GTEX-11OF3-1926-SM-59889 149.5
GTEX-S4P3-1326-SM-4AD6V 148.8
GTEX-144GL-2026-SM-5LU3O 148.7
GTEX-12WSM-1726-SM-5BC6J 148.5
GTEX-XYKS-1326-SM-4BRUN 148.4
GTEX-11P81-1926-SM-5BC53 147.4
GTEX-ZA64-1526-SM-5CVMD 146.6
GTEX-1313W-0826-SM-5EQ4T 145.4
GTEX-145ME-1526-SM-5Q5F2 143.7
GTEX-YFCO-1826-SM-4W1YH 143.4
GTEX-X261-0626-SM-3NMD9 141.9
GTEX-R3RS-0626-SM-48FE1 140.1
GTEX-S7SE-0826-SM-4AT4D 137.5
GTEX-ZTTD-1026-SM-51MRD 136.6
GTEX-ZVTK-0326-SM-51MRR 136.4
GTEX-XQ3S-1326-SM-4BOPQ 134.6
GTEX-YEC3-1026-SM-5IFI5 134.4
GTEX-14AS3-1626-SM-5S2OY 134.1
GTEX-11LCK-2426-SM-5HL5F 133.2
GTEX-PSDG-1626-SM-48TCQ 132.6
GTEX-SE5C-2126-SM-4BRUJ 132.4
GTEX-1122O-1226-SM-5H113 131.8
GTEX-13113-1726-SM-5GCOO 131.4
GTEX-ZV7C-1826-SM-5NQ83 131.2
GTEX-13D11-1026-SM-5IJFB 131.1
GTEX-144GM-0926-SM-5O994 128.0
GTEX-ZQUD-1926-SM-51MSA 128.0
GTEX-ZVT4-1026-SM-57WC4 127.2
GTEX-R53T-1526-SM-48FEK 125.6
GTEX-139T6-1626-SM-5PNYZ 125.3
GTEX-11DXY-2326-SM-5GICW 125.1
GTEX-11EI6-0626-SM-5985T 124.9
GTEX-1269C-2426-SM-5FQSN 124.9
GTEX-ZWKS-2826-SM-5NQ74 124.9
GTEX-11NV4-2026-SM-5N9DG 124.1
GTEX-11I78-2226-SM-5PNYA 122.4
GTEX-ZY6K-1626-SM-5GZWV 122.2
GTEX-XGQ4-0926-SM-4AT4U 121.5
GTEX-13QIC-2326-SM-5LU5N 120.4
GTEX-XMK1-1126-SM-4IHJ8 120.0
GTEX-WOFL-0826-SM-3MJG1 119.7
GTEX-ZDXO-0126-SM-5S2ND 118.7
GTEX-S4Q7-1126-SM-4AD6R 118.2
GTEX-QDT8-0626-SM-48TYW 117.9
GTEX-11O72-2126-SM-5N9FO 117.6
GTEX-RU72-0626-SM-46MUI 116.8
GTEX-ZYT6-0126-SM-5E45J 116.7
GTEX-13OW8-0226-SM-5K7UP 116.3
GTEX-11ZTT-2326-SM-5EQLG 116.1
GTEX-11DXZ-1926-SM-5GZZL 115.0
GTEX-ZUA1-1526-SM-59HLS 115.0
GTEX-145MN-1926-SM-5SIAI 114.0
GTEX-R55D-0826-SM-48FEA 113.5
GTEX-W5X1-2326-SM-3GIL6 111.8
GTEX-117YX-1426-SM-5H12H 110.4
GTEX-13NZ9-1026-SM-5MR5K 109.5
GTEX-ZLV1-1426-SM-4WWES 107.8
GTEX-11WQC-1726-SM-5GU4W 107.3
GTEX-VJWN-0726-SM-3GIJ8 107.2
GTEX-13CF2-2026-SM-5K7VI 106.1
GTEX-Y3I4-1526-SM-4TT7K 105.9
GTEX-QMRM-1626-SM-4R1KV 105.7
GTEX-T6MN-0726-SM-32PML 105.7
GTEX-11PRG-0826-SM-5EQ6A 105.3
GTEX-139TU-0626-SM-5KM3X 105.2
GTEX-13W46-0826-SM-5LU3H 104.9
GTEX-Y3IK-2326-SM-4WWDT 104.8
GTEX-S32W-2026-SM-4AD6E 104.7
GTEX-UTHO-1026-SM-3GAF7 104.2
GTEX-11P7K-0726-SM-5EGKX 103.7
GTEX-WXYG-2226-SM-4E3IM 103.7
GTEX-TML8-1226-SM-32QON 103.0
GTEX-1211K-1926-SM-5EQLB 102.7
GTEX-ZEX8-2226-SM-57WC6 102.7
GTEX-12KS4-0126-SM-5Q5A5 102.6
GTEX-13W3W-1226-SM-5LU4H 102.6
GTEX-UPK5-2326-SM-3P5Z8 102.4
GTEX-13O61-1826-SM-5KM4I 102.3
GTEX-ZAB4-2526-SM-5HL8M 102.2
GTEX-13NZ8-0126-SM-5IJCT 101.3
GTEX-12WSK-2226-SM-5GCO5 101.2
GTEX-11DZ1-0326-SM-5N9BN 100.6
GTEX-12ZZX-1126-SM-5EGKB 100.2
GTEX-11GS4-2126-SM-5A5KR 100.1
GTEX-XV7Q-2326-SM-4BRVZ 98.3
GTEX-133LE-1726-SM-5K7VQ 95.9
GTEX-14ABY-2126-SM-5QGQZ 94.5
GTEX-ZYWO-2326-SM-5GZY4 94.2
GTEX-QVJO-1826-SM-447C9 94.0
GTEX-WYBS-0926-SM-3NM94 93.8
GTEX-Y5LM-1726-SM-4VDSX 93.5
GTEX-XUW1-2326-SM-4BOO5 92.5
GTEX-RWS6-1926-SM-47JXY 92.0
GTEX-Y111-2026-SM-4SOJA 91.1
GTEX-12BJ1-1826-SM-5HL9N 91.0
GTEX-11EMC-2026-SM-5A5JV 90.7
GTEX-YB5K-1626-SM-5IFIN 90.7
GTEX-WYVS-1726-SM-3NMAY 90.3
GTEX-139T8-0826-SM-5L3DE 90.0
GTEX-ZT9W-2026-SM-51MRA 89.6
GTEX-1314G-1226-SM-5BC6D 89.5
GTEX-Y8LW-1626-SM-5IFHX 89.5
GTEX-11EM3-1326-SM-5N9C6 88.4
GTEX-T6MO-0326-SM-32QOK 87.4
GTEX-TMMY-0726-SM-33HBE 87.4
GTEX-YB5E-1726-SM-5IFJ3 86.8
GTEX-13PL6-2926-SM-5L3I2 86.6
GTEX-VUSG-2226-SM-4KKZO 86.5
GTEX-ZF29-1926-SM-5S2P1 86.0
GTEX-13FTX-1126-SM-5N9EN 85.8
GTEX-13FTY-2226-SM-5J1ND 85.5
GTEX-11DXW-0626-SM-5N9ER 85.3
GTEX-Y9LG-1426-SM-5IFJZ 84.2
GTEX-131YS-0626-SM-5EGKL 84.1
GTEX-U3ZN-1926-SM-4DXSG 84.0
GTEX-11GSO-1926-SM-5A5K3 83.8
GTEX-U412-1826-SM-4DXTJ 83.6
GTEX-UJHI-1426-SM-3DB9C 82.9
GTEX-ZQG8-0726-SM-5P9H9 82.6
GTEX-YFC4-1426-SM-5IFJG 82.3
GTEX-S341-1526-SM-4AD6K 82.0
GTEX-ZYW4-0826-SM-5GIDG 81.9
GTEX-12WSB-0626-SM-59HJO 81.8
GTEX-WYJK-1326-SM-3NB2T 81.4
GTEX-ZVT2-1826-SM-5NQ8W 80.7
GTEX-1399U-1826-SM-5PNZ1 80.6
GTEX-ZZ64-1226-SM-5E43R 80.1
GTEX-11TT1-2126-SM-5GU5Y 79.1
GTEX-XBED-1626-SM-47JYN 78.9
GTEX-ZF3C-2326-SM-5S2MZ 78.2
GTEX-1192X-2326-SM-5987X 78.0
GTEX-S4UY-0726-SM-4AD6X 77.7
GTEX-X15G-1626-SM-3NMB3 77.4
GTEX-ZTX8-1226-SM-4YCE9 76.4
GTEX-T5JW-2026-SM-4DM63 76.3
GTEX-XUJ4-1926-SM-4BOOV 75.1
GTEX-XMD2-0926-SM-4WWEF 74.9
GTEX-147F4-2826-SM-5NQBN 74.8
GTEX-14753-2426-SM-5LU8U 73.9
GTEX-13N11-1726-SM-5J1OJ 73.1
GTEX-ZF2S-2026-SM-5E461 71.5
GTEX-145LT-0726-SM-5S2VM 70.6
GTEX-131XW-0726-SM-5EGK3 68.7
GTEX-ZU9S-1926-SM-5NQBP 68.6
GTEX-REY6-2426-SM-48FF5 68.0
GTEX-QEL4-2126-SM-447AE 67.8
GTEX-ZC5H-2626-SM-5J2MG 67.7
GTEX-X4EP-2926-SM-3P5YQ 66.0
GTEX-U3ZH-1426-SM-4DXSR 64.9
GTEX-WI4N-1426-SM-3LK7H 63.9
GTEX-11P82-1326-SM-5HL62 62.4
GTEX-T5JC-2126-SM-32PMO 60.3
GTEX-R55F-1726-SM-2TF4R 58.2
GTEX-13NZB-2126-SM-5MR4Y 57.6
GTEX-Q2AG-0326-SM-48U1O 57.6
GTEX-T2YK-2226-SM-32QPT 57.5
GTEX-13O3P-0826-SM-5L3DH 55.6
GTEX-SIU7-1626-SM-4BRUK 55.6
GTEX-ZXES-0826-SM-5E43C 55.5
GTEX-145MO-0826-SM-5NQBL 55.3
GTEX-ZAJG-0626-SM-5HL8X 55.0
GTEX-13FHO-0826-SM-5L3E8 51.0
GTEX-QEG5-0726-SM-4R1JQ 50.1
GTEX-ZVE2-1226-SM-5NQ8R 49.9
GTEX-111YS-1926-SM-5GICC 49.7
GTEX-13OW5-2226-SM-5L3HC 45.7
GTEX-XMD1-0826-SM-4AT52 36.2
GTEX-132Q8-1426-SM-5EGK7 30.2
GTEX-XUZC-1626-SM-4BRVP 26.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

390.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 390.8
FF:10080-102A8 77 years, female 390.8

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