We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ANXA1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:8.8RPKM
FANTOM5:35.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA011271

 

Antibody HPA011272

 

Antibody CAB013023

 

Antibody CAB035987

 

Antibody CAB058693

 

Glial cells

Not detected   Not detected   Low   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

RPKM

2.03.69.20.918.9020406080100120140160180200
 
2.03.69.20.918.9020406080100120140160180200

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 8.8
Samples: 117

Max RPKM: 203.3
Min RPKM: 0.9
Std RPKM: 20
Median RPKM: 3.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 203.3
GTEX-XMD1-0011-R5A-SM-4AT47 47.8
GTEX-13JUV-0011-R5a-SM-5LZY5 46.1
GTEX-132Q8-0011-R5a-SM-5IJDM 41.5
GTEX-139TS-0011-R5b-SM-5J2MZ 36.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 32.6
GTEX-13OW6-0011-R5a-SM-5O9BK 23.8
GTEX-WWYW-0011-R5A-SM-3NB3E 23.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 20.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 18.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 18.5
GTEX-1399T-0011-R5b-SM-5IJDK 17.9
GTEX-12WSA-0011-R5b-SM-5GU5I 17.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 16.5
GTEX-NL3H-0011-R5a-SM-2I3GB 14.7
GTEX-PVOW-0011-R5A-SM-32PL7 13.4
GTEX-TSE9-0011-R5A-SM-3DB7J 13.2
GTEX-OHPN-0011-R5A-SM-2I5FF 12.9
GTEX-YFC4-0011-R5a-SM-4RGLR 12.2
GTEX-144GO-0011-R5a-SM-5PNUR 12.0
GTEX-RVPU-0011-R5A-SM-2XCAD 11.8
GTEX-12WSD-0011-R5b-SM-5CVNG 11.4
GTEX-S7SE-0011-R5A-SM-2XCDA 11.2
GTEX-11GSP-0011-R5a-SM-57WBE 10.7
GTEX-145LS-0011-R5a-SM-5SI65 10.5
GTEX-13G51-0011-R5a-SM-5L3EB 10.1
GTEX-ZE7O-0011-R5a-SM-57WBO 9.7
GTEX-11OF3-0011-R5a-SM-57WB4 9.4
GTEX-13X6I-0011-R5a-SM-5PNWW 9.4
GTEX-N7MT-0011-R5a-SM-2I3G6 9.2
GTEX-11WQC-0011-R5a-SM-5BC74 7.8
GTEX-12WSF-0011-R5a-SM-5HL8K 7.7
GTEX-13NYS-0011-R5a-SM-5MR4D 7.6
GTEX-P44H-0011-R5A-SM-2XCEX 7.5
GTEX-X585-0011-R5A-SM-46MVI 7.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 7.3
GTEX-NL4W-0011-R5a-SM-2I3GD 7.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 6.9
GTEX-X4XX-0011-R5A-SM-46MWN 6.9
GTEX-13VXU-0011-R5a-SM-5O9D7 6.6
GTEX-13JVG-0011-R5a-SM-5MR4O 6.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 6.2
GTEX-RVPV-0011-R5A-SM-2TF69 5.9
GTEX-WL46-0011-R5A-SM-3LK6V 5.7
GTEX-NPJ7-0011-R5a-SM-33HBK 5.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 5.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 5.3
GTEX-QMR6-0011-R5A-SM-32PKT 5.0
GTEX-1477Z-0011-R5b-SM-5PNUO 4.7
GTEX-139T8-0011-R5b-SM-5J1MO 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 4.4
GTEX-ZVT3-0011-R5a-SM-51MSI 4.4
GTEX-12WSB-0011-R5b-SM-5GU67 4.1
GTEX-UTHO-0011-R5A-SM-3GIJD 3.9
GTEX-Z93S-0011-R5b-SM-4RGNI 3.9
GTEX-11H98-0011-R5b-SM-57WCF 3.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 3.8
GTEX-14ABY-0011-R5b-SM-5SI7B 3.7
GTEX-13OW5-0011-R5b-SM-5L3FR 3.6
GTEX-13NZA-0011-R5b-SM-5KM4K 3.5
GTEX-S7PM-0011-R5A-SM-3NM8G 3.4
GTEX-N7MS-0011-R5a-SM-2HMK8 3.2
GTEX-QVJO-0011-R5A-SM-2S1QM 3.2
GTEX-13CF2-0011-R5a-SM-5LZWS 3.1
GTEX-13FLV-0011-R5a-SM-5LZWT 3.1
GTEX-13CZV-0011-R5a-SM-5K7XA 3.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 3.0
GTEX-T5JC-0011-R5A-SM-32PLK 3.0
GTEX-WVLH-0011-R5A-SM-3MJFW 3.0
GTEX-X261-0011-R5A-SM-3NMB4 3.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 3.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 3.0
GTEX-14BIM-0011-R5b-SM-5S2RM 2.8
GTEX-13CIG-0011-R5b-SM-5L3F2 2.7
GTEX-144GL-0011-R5b-SM-5PNUJ 2.7
GTEX-14BIN-0011-R5b-SM-5SI78 2.7
GTEX-13112-0011-R5b-SM-5DUV8 2.6
GTEX-13X6K-0011-R5b-SM-5PNUE 2.4
GTEX-1445S-0011-R5a-SM-5PNUS 2.4
GTEX-12WSC-0011-R5b-SM-5CVNS 2.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 2.3
GTEX-11NV4-0011-R5a-SM-5NQ88 2.2
GTEX-12ZZX-0011-R5a-SM-5HL89 2.2
GTEX-13FHP-0011-R5b-SM-5LZY2 2.2
GTEX-13FLW-0011-R5a-SM-5LZX6 2.1
GTEX-13O3O-0011-R5b-SM-5KM44 2.1
GTEX-12WSH-0011-R5b-SM-5P9F3 2.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 2.0
GTEX-13OVH-0011-R5b-SM-5KM4L 2.0
GTEX-13OW7-0011-R5b-SM-5O9DM 2.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 2.0
GTEX-WZTO-0011-R5B-SM-3NMC5 2.0
GTEX-ZUA1-0011-R5b-SM-51MTG 2.0
GTEX-RU72-0011-R5A-SM-2TF6U 1.9
GTEX-ZXG5-0011-R5b-SM-57WBN 1.9
GTEX-13NYB-0011-R5a-SM-5MR45 1.8
GTEX-145MH-0011-R5a-SM-5P9JT 1.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 1.8
GTEX-1313W-0011-R5b-SM-5L3EP 1.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 1.7
GTEX-T6MN-0011-R5A-SM-32QPD 1.7
GTEX-131YS-0011-R5b-SM-5K7YB 1.6
GTEX-13S7M-0011-R5b-SM-5P9HS 1.6
GTEX-ZV68-0011-R5a-SM-4YCDW 1.6
GTEX-R55E-0011-R5A-SM-2TC5N 1.5
GTEX-T2IS-0011-R5A-SM-32QP4 1.5
GTEX-YJ89-0011-R5a-SM-4V6GM 1.5
GTEX-13OVL-0011-R5b-SM-5L3FU 1.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 1.3
GTEX-13SLX-0011-R5a-SM-5O9BV 1.3
GTEX-XOTO-0011-R5A-SM-4B657 1.3
GTEX-145MG-0011-R5b-SM-5S2VU 1.2
GTEX-OXRN-0011-R5A-SM-2I5EF 1.2
GTEX-139TT-0011-R5b-SM-5K7W8 1.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 1.0
GTEX-13FXS-0011-R5b-SM-5LZYE 0.9
GTEX-13X6J-0011-R5b-SM-5PNWT 0.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

35.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 35.3
FF:10164-103B2 76 years, female 42.3
FF:10379-105H1 89 years, female 28.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.