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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:48.8TPM
GTEx:19.2RPKM
FANTOM5:103.0Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:Not detected
 

Antibody staining

Antibody HPA011271

 

Antibody HPA011272

 

Antibody CAB013023

 

Antibody CAB035987

 

Antibody CAB058693

 

Cells in glomeruli

Low   Low   High   Medium   Medium  

Cells in tubules

Not detected   Not detected   Medium   Not detected   Not detected  
         
         
         

KIDNEY - HPA RNA-seq

Average TPM

48.8

overview Female, age 58
Sample 1
TPM: 33.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 32.6
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 45.0
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 48.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 52.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 91.3
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 37.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 36.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 61.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

19.2

GTEx sample id

RPKM

10.313.224.04.243.7051015202530354045505560
 
10.313.224.04.243.7051015202530354045505560

Kidney - Cortex

Kidney - Cortex
RPKM: 19.2
Samples: 32

Max RPKM: 62.6
Min RPKM: 4.2
Std RPKM: 14.7
Median RPKM: 13.2
GTEX-11TTK-1926-SM-5PNW8 62.6
GTEX-1399S-0526-SM-5IJG8 53.1
GTEX-ZVZP-0926-SM-5GIDB 43.7
GTEX-ZLFU-0926-SM-5P9F8 40.9
GTEX-13OVI-1126-SM-5KLZF 39.6
GTEX-13O1R-2526-SM-5N9FW 39.5
GTEX-147F4-2626-SM-5Q5CS 30.7
GTEX-QLQW-1626-SM-4R1K1 25.3
GTEX-RN64-1626-SM-48FD7 23.6
GTEX-ZYFG-1626-SM-5GZYY 18.4
GTEX-12696-0926-SM-5FQTV 16.3
GTEX-XPVG-0526-SM-4B65N 15.7
GTEX-145MN-0326-SM-5QGQI 14.8
GTEX-11GS4-2326-SM-5A5KS 14.5
GTEX-UPIC-1126-SM-4IHLO 13.8
GTEX-NPJ8-2226-SM-3TW8D 13.3
GTEX-13RTJ-2226-SM-5S2Q1 13.1
GTEX-QDVN-1626-SM-48TZC 12.7
GTEX-ZYFD-1526-SM-5NQ7T 12.0
GTEX-13OW6-1826-SM-5N9F9 11.8
GTEX-13NYB-1726-SM-5N9G2 11.7
GTEX-13112-2126-SM-5GCO4 11.6
GTEX-ZYT6-2226-SM-5GIC9 11.5
GTEX-1497J-0826-SM-5NQAJ 10.5
GTEX-13OVL-1826-SM-5KLZR 9.5
GTEX-P4QS-1126-SM-3NMD5 8.0
GTEX-T5JC-1526-SM-4DM68 7.9
GTEX-ZC5H-1726-SM-5HL7X 7.4
GTEX-11OF3-1326-SM-5N9FJ 6.9
GTEX-12WSG-0826-SM-5EQ5A 6.1
GTEX-N7MS-1626-SM-3LK5F 4.8
GTEX-Y5V6-2026-SM-5IFHO 4.2
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

103.0

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 103.0
FF:10017-101C8 60,62,63 years, female 103.0

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