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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:83.0TPM
GTEx:23.0RPKM
FANTOM5:88.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA011271

 

Antibody HPA011272

 

Antibody CAB013023

 

Antibody CAB035987

 

Antibody CAB058693

 

Glandular cells

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

SMALL INTESTINE - HPA RNA-seq

Average TPM

83.0

overview Male, age 65
Sample 1
TPM: 54.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 75.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 109.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 92.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

23.0

GTEx sample id

RPKM

13.819.426.54.045.0010203040506070
 
13.819.426.54.045.0010203040506070

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 23.0
Samples: 88

Max RPKM: 74.4
Min RPKM: 4
Std RPKM: 13.4
Median RPKM: 19.4
GTEX-13OVI-1926-SM-5IJCG 74.4
GTEX-111CU-1326-SM-5NQ8L 56.3
GTEX-WFG8-1626-SM-4LVMB 55.7
GTEX-1192X-2526-SM-59868 55.3
GTEX-117YX-0326-SM-5GICL 53.8
GTEX-Y3IK-1726-SM-4YCCR 53.7
GTEX-XMK1-1826-SM-4B66F 49.8
GTEX-13111-1426-SM-5DUW3 45.0
GTEX-Y5LM-1626-SM-4VDTB 43.8
GTEX-12WSK-1526-SM-5CVNO 42.2
GTEX-13O21-1026-SM-5IJDU 41.6
GTEX-13QBU-1926-SM-5IJEW 40.5
GTEX-ZVT2-2126-SM-5NQ93 39.8
GTEX-UPK5-2026-SM-4JBIM 38.0
GTEX-ZPIC-2326-SM-57WDW 34.7
GTEX-XAJ8-0526-SM-47JYK 33.0
GTEX-13RTK-0826-SM-5Q5C6 32.6
GTEX-ZF2S-1726-SM-57WFT 30.1
GTEX-ZQG8-2526-SM-57WEQ 29.5
GTEX-13FTW-2026-SM-5IJE2 28.4
GTEX-XXEK-1026-SM-4BRUW 26.8
GTEX-WRHK-1026-SM-4MVOD 26.7
GTEX-148VJ-2226-SM-5NQ9M 26.4
GTEX-Y114-1426-SM-4TT6W 26.3
GTEX-139YR-2226-SM-5IFFW 25.9
GTEX-ZQUD-0926-SM-57WE3 25.8
GTEX-131XG-1726-SM-5LZUR 25.7
GTEX-145ME-0926-SM-5O9AR 24.4
GTEX-WFJO-0926-SM-4LVM2 24.2
GTEX-ZLV1-1126-SM-4WWBW 23.4
GTEX-11P7K-1626-SM-5GU63 22.8
GTEX-ZTPG-2626-SM-57WFX 22.8
GTEX-ZP4G-1626-SM-57WGD 22.7
GTEX-WH7G-1626-SM-4LVMY 22.6
GTEX-ZC5H-2326-SM-4WAYT 22.5
GTEX-VUSG-1726-SM-4KKZL 21.9
GTEX-Z9EW-0926-SM-5CVMM 21.6
GTEX-WFG7-1726-SM-4LVME 21.5
GTEX-11P82-0826-SM-5P9GU 21.4
GTEX-ZEX8-1826-SM-57WBH 20.3
GTEX-11XUK-1426-SM-5EQMG 20.2
GTEX-ZVP2-1726-SM-5GU5P 20.2
GTEX-139T6-1026-SM-5IJGC 20.0
GTEX-1399U-2126-SM-5IFEZ 19.4
GTEX-WEY5-1526-SM-4LMJF 19.3
GTEX-XBED-1426-SM-4AT4G 19.1
GTEX-WQUQ-2426-SM-4MVNW 18.9
GTEX-11NSD-1726-SM-5N9C3 18.3
GTEX-11EQ9-1326-SM-5985X 17.7
GTEX-13PL7-2626-SM-5IFH4 17.6
GTEX-1399R-2026-SM-5K7WN 17.2
GTEX-X15G-1426-SM-4PQZK 16.5
GTEX-13113-1226-SM-5EGHT 16.1
GTEX-11VI4-1626-SM-5EQKO 16.0
GTEX-12BJ1-1926-SM-5HL9Z 15.8
GTEX-13O61-1326-SM-5KM31 15.8
GTEX-YF7O-1826-SM-5IFIU 15.4
GTEX-ZA64-1226-SM-5HL7B 15.1
GTEX-YEC4-1726-SM-4W21E 15.0
GTEX-11DXZ-1326-SM-5H11X 14.5
GTEX-ZTSS-0926-SM-59865 14.5
GTEX-Y9LG-1626-SM-5IFHM 14.4
GTEX-VJYA-0926-SM-4KL1N 14.4
GTEX-14DAR-1426-SM-5RQIR 14.3
GTEX-ZLFU-1526-SM-4WWBT 14.1
GTEX-ZTX8-0526-SM-59HLD 13.8
GTEX-ZYWO-1526-SM-5SIAL 13.6
GTEX-13FH7-1226-SM-5IJFK 13.3
GTEX-XGQ4-1326-SM-4GIDU 13.0
GTEX-14E6E-1626-SM-5RQI7 13.0
GTEX-145LT-1026-SM-5LU9O 12.4
GTEX-1399S-2026-SM-5KM4B 12.1
GTEX-11DXX-1626-SM-5H11H 11.9
GTEX-133LE-1426-SM-5IFH1 11.7
GTEX-ZXES-1526-SM-5NQ95 11.4
GTEX-ZYFG-2026-SM-5E43Y 11.3
GTEX-ZZ64-0526-SM-5GZXM 11.2
GTEX-131XF-1326-SM-5GCMQ 11.1
GTEX-13CF3-1226-SM-5LZXN 10.9
GTEX-ZPCL-1726-SM-57WEO 10.8
GTEX-ZVZP-1826-SM-5GZXB 10.5
GTEX-11I78-1126-SM-5A5K5 10.3
GTEX-XUZC-1426-SM-4BRV3 9.9
GTEX-13D11-0726-SM-5LZZB 9.3
GTEX-X5EB-1626-SM-4E3IV 8.4
GTEX-1122O-1326-SM-5H11F 8.2
GTEX-YB5E-1526-SM-5IFIE 8.1
GTEX-111YS-1426-SM-5GID8 4.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

88.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 88.6
FF:10024-101D6 15,40,85 years, mixed 88.6

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