Tissue expression of LMO7 - Summary - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

LMO7

TISSUE

premium

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	LMO7
Gene description	LIM domain 7
Protein class	Plasma proteins Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	18
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Mixed

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic and membranous expression in most tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA020923
	SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	LMO7 (HGNC Symbol)
Synonyms	FBX20, FBXO20, KIAA0858
Description	LIM domain 7 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein containing a calponin homology (CH) domain, a PDZ domain, and a LIM domain, and may be involved in protein-protein interactions. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene, however, the full-length nature of some variants is not known. [provided by RefSeq, Jan 2009]
Chromosome	13
Cytoband	q22.2
Chromosome location (bp)	75620434 - 75859870
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000136153 (version 83.38)
Entrez gene	4008
UniProt	Q8WWI1 (UniProt - Evidence at protein level)
neXtProt	NX_Q8WWI1
Antibodypedia	LMO7 antibodies

PROTEIN BROWSER

LMO7-001	LMO7-002	LMO7-003	LMO7-004	LMO7-005	LMO7-006	LMO7-012	LMO7-015	LMO7-016	LMO7-017	LMO7-020	LMO7-021	LMO7-022	LMO7-023	LMO7-024	LMO7-025	LMO7-201	LMO7-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
LMO7-001 ENSP00000342112 ENST00000341547	Q8WWI1 [Direct mapping] LIM domain only protein 7 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0000151 [ubiquitin ligase complex] GO:0004842 [ubiquitin-protein transferase activity] GO:0005515 [protein binding] GO:0005634 [nucleus] GO:0005737 [cytoplasm] GO:0005925 [focal adhesion] GO:0008270 [zinc ion binding] GO:0016567 [protein ubiquitination] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1349 aa 153.7 kDa	No	1
LMO7-002 ENSP00000433352 ENST00000465261	A0A0A0MTE2 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1385 aa 158.2 kDa	No	0
LMO7-003 ENSP00000388955 ENST00000447038	H0Y424 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1056 aa 121.4 kDa	No	0
LMO7-004 ENSP00000366719 ENST00000377499	E9PMP7 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1046 aa 119.5 kDa	No	0
LMO7-005 ENSP00000317802 ENST00000321797	E9PMT2 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1398 aa 160 kDa	No	0
LMO7-006 ENSP00000431271 ENST00000497947	E9PLU6 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		121 aa 14.3 kDa	No	0
LMO7-012 ENSP00000431129 ENST00000526202	E9PMS6 [Direct mapping] LIM domain only protein 7 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] GO:0016021 [integral component of membrane] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1275 aa 145.4 kDa	No	1
LMO7-015 ENSP00000475811 ENST00000533809	U3KQE6 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	99 aa 12.1 kDa	No	0
LMO7-016 ENSP00000435296 ENST00000525107	H0YE95 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	179 aa 19.6 kDa	No	0
LMO7-017 ENSP00000434943 ENST00000534657	E9PMJ6 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		12 aa 1.6 kDa	No	0
LMO7-020 ENSP00000434083 ENST00000525914	H0YDQ3 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	292 aa 34.3 kDa	No	0
LMO7-021 ENSP00000433591 ENST00000524651	H0YDG6 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	305 aa 34.4 kDa	No	0
LMO7-022 ENSP00000432269 ENST00000526371	E9PRJ0 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	165 aa 19.5 kDa	No	0
LMO7-023 ENSP00000434201 ENST00000526528	E9PRE3 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	141 aa 16.4 kDa	No	0
LMO7-024 ENSP00000431636 ENST00000489941	E9PK58 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	166 aa 19.9 kDa	No	0
LMO7-025 ENSP00000431896 ENST00000525373	E9PJ10 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	192 aa 23 kDa	No	0
LMO7-201 ENSP00000349571 ENST00000357063	J3KP06 [Direct mapping] LIM domain only protein 7 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1668 aa 190.7 kDa	No	1
LMO7-202 ENSP00000366757 ENST00000377534	F8WD26 [Direct mapping] LIM domain only protein 7 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] GO:0023051 [regulation of signaling] GO:0030155 [regulation of cell adhesion] Show all	1631 aa 186.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.