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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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CSH1
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CSH1

Gene description

Chorionic somatomammotropin hormone 1 (placental lactogen)

Protein class

Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (placenta)
GTEx:Tissue enriched (pituitary gland)
FANTOM5:Group enriched (placenta, pituitary gland)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in trophoblastic cells.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA043715 , CAB026374
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Pituitary gland
N/A
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Placenta

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (placenta)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (pituitary gland)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (placenta, pituitary gland)

GENE INFORMATION

Gene name

CSH1 (HGNC Symbol)

Synonyms

CSA, CSMT, FLJ75407, hCS-A, PL

Description

Chorionic somatomammotropin hormone 1 (placental lactogen) (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a member of the somatotropin/prolactin family of hormones and plays an important role in growth control. The gene is located at the growth hormone locus on chromosome 17 along with four other related genes in the same transcriptional orientation; an arrangement which is thought to have evolved by a series of gene duplications. Although the five genes share a remarkably high degree of sequence identity, they are expressed selectively in different tissues. Alternative splicing generates additional isoforms of each of the five growth hormones, leading to further diversity and potential for specialization. This particular family member is expressed mainly in the placenta and utilizes multiple transcription initiation sites. Expression of the identical mature proteins for chorionic somatomammotropin hormones 1 and 2 is upregulated during development, although the ratio of 1 to 2 increases by term. Mutations in this gene result in placental lactogen deficiency and Silver-Russell syndrome. [provided by RefSeq, Jul 2008]

Chromosome

17

Cytoband

q23.3

Chromosome location (bp)

63894909 - 63896661

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000136488 (version 83.38)

Entrez gene

1442

UniProt

P0DML2 (UniProt - Evidence at protein level)

neXtProt

NX_P0DML2

Antibodypedia

CSH1 antibodies

PROTEIN BROWSER

CSH1-001
CSH1-003
CSH1-201
CSH1-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CSH1-001
ENSP00000316416
ENST00000316193
P0DML2 [Direct mapping]
Chorionic somatomammotropin hormone 1
A8K6C2 [Target identity:100%; Query identity:100%]
Chorionic somatomammotropin hormone 1 isoform 1; HCG1749481, isoform CRA_c; HCG1749481, isoform CRA_e; HCG1749481, isoform CRA_i; cDNA FLJ75407, highly similar to Homo sapiens chorionic somatomammotropin hormone 1 (placental lactogen) (CSH1), transcript variant 1, mRNA
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
GO:0005783 [endoplasmic reticulum]
GO:0031988 [membrane-bounded vesicle]
GO:0046872 [metal ion binding]
GO:0060397 [JAK-STAT cascade involved in growth hormone signaling pathway]
Show all
217 aa
25 kDa
Yes 0
CSH1-003
ENSP00000333268
ENST00000329882
A6NFB4 [Direct mapping]
Chorionic somatomammotropin hormone 1; Chorionic somatomammotropin hormone 1 isoform 2; HCG1749481, isoform CRA_k
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
256 aa
28.8 kDa
Yes 0
CSH1-201
ENSP00000402517
ENST00000453363
B1A4H2 [Direct mapping]
Chorionic somatomammotropin hormone 1; Chorionic somatomammotropin hormone 1 isoform 3; HCG1749481, isoform CRA_d; HCG1749481, isoform CRA_w; HCG1749481, isoform CRA_y
Show all
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
122 aa
13.9 kDa
Yes 0
CSH1-202
ENSP00000478652
ENST00000610991
A0A087WUG6 [Direct mapping]
Chorionic somatomammotropin hormone 1; Chorionic somatomammotropin hormone 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005179 [hormone activity]
GO:0005576 [extracellular region]
Show all
128 aa
15 kDa
No 0

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