Fields »
ABOUT
HELP
BLOG
IMP4

SOFT TISSUE - Expression summary

RNA expression
HPA:17.5TPM
GTEx:32.8RPKM
FANTOM5:37.6Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

17.5
N/A Female, age 80
Sample 1
TPM: 26.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 11.9
N/A Female, age 57
Sample 3
TPM: 15.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 24.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 9.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

32.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 31.8
Samples: 350

Max RPKM: 61.3
Min RPKM: 17.7
Std RPKM: 8
Median RPKM: 30.2
GTEX-ZYVF-0226-SM-5GIEG 61.3
GTEX-X4XY-0326-SM-46MVZ 57.6
GTEX-12C56-1626-SM-5FQUO 55.0
GTEX-SUCS-1826-SM-32PM1 54.1
GTEX-ZYY3-0226-SM-5E45M 53.9
GTEX-OOBK-0226-SM-2YUMF 53.4
GTEX-13O1R-0226-SM-5K7U5 52.1
GTEX-1399U-2426-SM-5K7XB 51.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 34.2
Samples: 227

Max RPKM: 110.4
Min RPKM: 13.1
Std RPKM: 12.7
Median RPKM: 31.3
GTEX-Y5LM-0826-SM-4VDSW 110.4
GTEX-1399S-1426-SM-5PNYQ 89.8
GTEX-ZYVF-1026-SM-5E44V 77.1
GTEX-13X6H-1726-SM-5Q5EH 74.1
GTEX-U8XE-1926-SM-3DB98 64.3
GTEX-132QS-0826-SM-5K7WV 63.9
GTEX-11I78-0226-SM-5HL6R 62.8
GTEX-ZA64-0926-SM-5HL7H 62.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

37.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 37.6
FF:10010-101C1 65,65,76 years, mixed 37.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.