We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ODF2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.3TPM
GTEx:9.3RPKM
FANTOM5:23.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA001874

 

Adipocytes

Not detected  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 

BREAST - HPA RNA-seq

Average TPM

17.3

overview Female, age 52
Sample 1
TPM: 12.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 17.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 22.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 17.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 9.3
Samples: 214

Max RPKM: 16
Min RPKM: 4.5
Std RPKM: 2.2
Median RPKM: 9.4
GTEX-VUSG-2226-SM-4KKZO 16.0
GTEX-QEG5-0726-SM-4R1JQ 15.0
GTEX-ZAJG-0626-SM-5HL8X 14.8
GTEX-11EMC-2026-SM-5A5JV 14.6
GTEX-11WQK-2426-SM-5GU5C 14.5
GTEX-13O3P-0826-SM-5L3DH 14.5
GTEX-U3ZH-1426-SM-4DXSR 14.2
GTEX-13NZ8-0126-SM-5IJCT 13.8
GTEX-13OW5-2226-SM-5L3HC 13.8
GTEX-X261-0626-SM-3NMD9 13.8
GTEX-13FTY-2226-SM-5J1ND 13.7
GTEX-11GSO-1926-SM-5A5K3 13.6
GTEX-12WSB-0626-SM-59HJO 13.6
GTEX-YFC4-1426-SM-5IFJG 13.2
GTEX-11EI6-0626-SM-5985T 12.9
GTEX-13NZ9-1026-SM-5MR5K 12.9
GTEX-S341-1526-SM-4AD6K 12.7
GTEX-139T8-0826-SM-5L3DE 12.5
GTEX-ZTX8-1226-SM-4YCE9 12.5
GTEX-Q2AG-0326-SM-48U1O 12.4
GTEX-RU72-0626-SM-46MUI 12.4
GTEX-ZU9S-1926-SM-5NQBP 12.4
GTEX-1192X-2326-SM-5987X 12.3
GTEX-13PL6-2926-SM-5L3I2 12.2
GTEX-T2YK-2226-SM-32QPT 12.2
GTEX-UPK5-2326-SM-3P5Z8 12.2
GTEX-QEL4-2126-SM-447AE 12.1
GTEX-13CF2-2026-SM-5K7VI 12.0
GTEX-13NZB-2126-SM-5MR4Y 11.9
GTEX-ZY6K-1626-SM-5GZWV 11.9
GTEX-ZV7C-1826-SM-5NQ83 11.7
GTEX-R3RS-0626-SM-48FE1 11.6
GTEX-ZVE2-1226-SM-5NQ8R 11.5
GTEX-X4EP-2926-SM-3P5YQ 11.4
GTEX-XMD1-0826-SM-4AT52 11.3
GTEX-R55F-1726-SM-2TF4R 11.2
GTEX-T6MN-0726-SM-32PML 11.2
GTEX-ZTTD-1026-SM-51MRD 11.2
GTEX-13W3W-1226-SM-5LU4H 11.0
GTEX-1117F-2826-SM-5GZXL 10.9
GTEX-11DZ1-0326-SM-5N9BN 10.9
GTEX-11GS4-2126-SM-5A5KR 10.9
GTEX-WYJK-1326-SM-3NB2T 10.9
GTEX-111YS-1926-SM-5GICC 10.8
GTEX-131YS-0626-SM-5EGKL 10.8
GTEX-S7SE-0826-SM-4AT4D 10.8
GTEX-UJHI-1426-SM-3DB9C 10.8
GTEX-ZF2S-2026-SM-5E461 10.8
GTEX-11DXW-0626-SM-5N9ER 10.7
GTEX-U3ZN-1926-SM-4DXSG 10.7
GTEX-WOFL-0826-SM-3MJG1 10.7
GTEX-ZEX8-2226-SM-57WC6 10.7
GTEX-11NV4-2026-SM-5N9DG 10.6
GTEX-QDT8-0626-SM-48TYW 10.6
GTEX-S32W-2026-SM-4AD6E 10.6
GTEX-SIU7-1626-SM-4BRUK 10.6
GTEX-11O72-2126-SM-5N9FO 10.5
GTEX-WYVS-1726-SM-3NMAY 10.5
GTEX-1269C-2426-SM-5FQSN 10.4
GTEX-13O3Q-2226-SM-5KM4O 10.3
GTEX-13PVQ-1026-SM-5KM3M 10.3
GTEX-T5JW-2026-SM-4DM63 10.3
GTEX-WRHU-0326-SM-3MJFY 10.3
GTEX-XUW1-2326-SM-4BOO5 10.3
GTEX-11P81-1926-SM-5BC53 10.2
GTEX-13O3O-0826-SM-5K7WE 10.2
GTEX-TMMY-0726-SM-33HBE 10.2
GTEX-Y8LW-1626-SM-5IFHX 10.2
GTEX-ZYW4-0826-SM-5GIDG 10.2
GTEX-RWS6-1926-SM-47JXY 10.1
GTEX-Y3IK-2326-SM-4WWDT 10.1
GTEX-ZC5H-2626-SM-5J2MG 10.1
GTEX-ZLV1-1426-SM-4WWES 10.1
GTEX-146FH-0826-SM-5SI8T 10.0
GTEX-UTHO-1026-SM-3GAF7 10.0
GTEX-Y5V5-2126-SM-4WWFO 10.0
GTEX-11LCK-2426-SM-5HL5F 9.9
GTEX-12WSN-1326-SM-5GCNT 9.9
GTEX-1314G-1226-SM-5BC6D 9.9
GTEX-133LE-1726-SM-5K7VQ 9.9
GTEX-139TU-0626-SM-5KM3X 9.9
GTEX-ZYFC-0826-SM-5E44K 9.9
GTEX-ZYWO-2326-SM-5GZY4 9.9
GTEX-1313W-0826-SM-5EQ4T 9.8
GTEX-SE5C-2126-SM-4BRUJ 9.8
GTEX-X4XY-0926-SM-4E3JD 9.8
GTEX-13D11-1026-SM-5IJFB 9.7
GTEX-13OW8-0226-SM-5K7UP 9.7
GTEX-ZF29-1926-SM-5S2P1 9.7
GTEX-ZWKS-2826-SM-5NQ74 9.7
GTEX-11PRG-0826-SM-5EQ6A 9.6
GTEX-132Q8-1426-SM-5EGK7 9.6
GTEX-13O61-1826-SM-5KM4I 9.6
GTEX-145LT-0726-SM-5S2VM 9.6
GTEX-T5JC-2126-SM-32PMO 9.6
GTEX-TKQ2-1826-SM-33HB2 9.6
GTEX-Y111-2026-SM-4SOJA 9.6
GTEX-ZUA1-1526-SM-59HLS 9.6
GTEX-ZVTK-0326-SM-51MRR 9.6
GTEX-11NSD-0926-SM-5N9DR 9.5
GTEX-12WSM-1726-SM-5BC6J 9.5
GTEX-13W46-0826-SM-5LU3H 9.5
GTEX-VJWN-0726-SM-3GIJ8 9.5
GTEX-W5X1-2326-SM-3GIL6 9.5
GTEX-WI4N-1426-SM-3LK7H 9.5
GTEX-12ZZX-1126-SM-5EGKB 9.4
GTEX-QVJO-1826-SM-447C9 9.4
GTEX-XUJ4-1926-SM-4BOOV 9.4
GTEX-1122O-1226-SM-5H113 9.3
GTEX-WXYG-2226-SM-4E3IM 9.3
GTEX-WYBS-0926-SM-3NM94 9.3
GTEX-XMD2-0926-SM-4WWEF 9.3
GTEX-11P7K-0726-SM-5EGKX 9.2
GTEX-YFCO-1826-SM-4W1YH 9.2
GTEX-13113-1726-SM-5GCOO 9.1
GTEX-147F4-2826-SM-5NQBN 9.1
GTEX-XV7Q-2326-SM-4BRVZ 9.1
GTEX-ZV6S-1826-SM-5NQ8D 9.1
GTEX-12BJ1-1826-SM-5HL9N 9.0
GTEX-145MO-0826-SM-5NQBL 9.0
GTEX-RUSQ-2026-SM-4GIAK 9.0
GTEX-11TT1-2126-SM-5GU5Y 8.9
GTEX-13QIC-2326-SM-5LU5N 8.9
GTEX-T6MO-0326-SM-32QOK 8.9
GTEX-XOT4-0726-SM-4GIAW 8.9
GTEX-Y3I4-1526-SM-4TT7K 8.9
GTEX-Y5LM-1726-SM-4VDSX 8.9
GTEX-ZDTT-2126-SM-5S2OJ 8.9
GTEX-ZXES-0826-SM-5E43C 8.9
GTEX-11I78-2226-SM-5PNYA 8.8
GTEX-11WQC-1726-SM-5GU4W 8.8
GTEX-13N11-1726-SM-5J1OJ 8.8
GTEX-144GL-2026-SM-5LU3O 8.8
GTEX-S4P3-1326-SM-4AD6V 8.8
GTEX-TML8-1226-SM-32QON 8.8
GTEX-ZA64-1526-SM-5CVMD 8.8
GTEX-11OF3-1926-SM-59889 8.6
GTEX-14753-2426-SM-5LU8U 8.6
GTEX-XGQ4-0926-SM-4AT4U 8.6
GTEX-11EQ9-1826-SM-5Q5AJ 8.5
GTEX-R53T-1526-SM-48FEK 8.5
GTEX-Y5V6-2126-SM-4WWFX 8.5
GTEX-1211K-1926-SM-5EQLB 8.4
GTEX-XBED-1626-SM-47JYN 8.4
GTEX-REY6-2426-SM-48FF5 8.3
GTEX-XUZC-1626-SM-4BRVP 8.3
GTEX-ZVT2-1826-SM-5NQ8W 8.3
GTEX-ZYT6-0126-SM-5E45J 8.3
GTEX-11TUW-1826-SM-5BC5D 8.2
GTEX-131XW-0726-SM-5EGK3 8.1
GTEX-S33H-0326-SM-4AD6N 8.1
GTEX-XYKS-1326-SM-4BRUN 8.1
GTEX-YJ8O-2226-SM-5IFHW 8.1
GTEX-ZZPU-0626-SM-5E43T 8.1
GTEX-R55D-0826-SM-48FEA 8.0
GTEX-11DXY-2326-SM-5GICW 7.9
GTEX-12KS4-0126-SM-5Q5A5 7.9
GTEX-T2IS-1526-SM-32QPR 7.9
GTEX-ZF3C-2326-SM-5S2MZ 7.9
GTEX-11EM3-1326-SM-5N9C6 7.8
GTEX-13CF3-2126-SM-5IFJP 7.8
GTEX-145MN-1926-SM-5SIAI 7.8
GTEX-14E6E-1326-SM-5S2NR 7.8
GTEX-X15G-1626-SM-3NMB3 7.8
GTEX-XQ8I-2426-SM-4WAXY 7.8
GTEX-144GM-0926-SM-5O994 7.7
GTEX-XQ3S-1326-SM-4BOPQ 7.7
GTEX-U412-1826-SM-4DXTJ 7.5
GTEX-132AR-0826-SM-5EGK6 7.4
GTEX-132NY-0826-SM-5K7Y7 7.4
GTEX-13N1W-0626-SM-5MR4U 7.4
GTEX-13S86-1226-SM-5S2OA 7.3
GTEX-145ME-1526-SM-5Q5F2 7.3
GTEX-PSDG-1626-SM-48TCQ 7.3
GTEX-ZQUD-1926-SM-51MSA 7.3
GTEX-14AS3-1626-SM-5S2OY 7.2
GTEX-ZVZQ-0826-SM-51MRF 7.2
GTEX-12WSK-2226-SM-5GCO5 7.1
GTEX-1399U-1826-SM-5PNZ1 7.1
GTEX-S4Q7-1126-SM-4AD6R 7.1
GTEX-U8XE-0826-SM-4E3J1 7.1
GTEX-S4UY-0726-SM-4AD6X 7.0
GTEX-13FHO-0826-SM-5L3E8 6.9
GTEX-Y8E4-1626-SM-5S2MW 6.8
GTEX-YEC3-1026-SM-5IFI5 6.8
GTEX-ZLFU-2126-SM-4WWEV 6.8
GTEX-139T6-1626-SM-5PNYZ 6.7
GTEX-QMRM-1626-SM-4R1KV 6.7
GTEX-Y114-2026-SM-4TT7L 6.7
GTEX-11DXZ-1926-SM-5GZZL 6.6
GTEX-117XS-1926-SM-5GICO 6.5
GTEX-11ONC-2126-SM-5HL6E 6.5
GTEX-ZDXO-0126-SM-5S2ND 6.4
GTEX-13FTX-1126-SM-5N9EN 6.3
GTEX-ZZ64-1226-SM-5E43R 6.3
GTEX-11ZUS-0826-SM-5FQUY 6.2
GTEX-14ABY-2126-SM-5QGQZ 6.2
GTEX-Y9LG-1426-SM-5IFJZ 6.2
GTEX-13FTW-1426-SM-5LZWZ 6.1
GTEX-TKQ1-0226-SM-33HB5 6.1
GTEX-ZVT4-1026-SM-57WC4 6.1
GTEX-WFON-1826-SM-3GILG 6.0
GTEX-YB5K-1626-SM-5IFIN 5.9
GTEX-ZPIC-1126-SM-5BC7F 5.9
GTEX-WY7C-2726-SM-3NB3P 5.8
GTEX-11P82-1326-SM-5HL62 5.7
GTEX-ZT9W-2026-SM-51MRA 5.7
GTEX-ZAB4-2526-SM-5HL8M 5.5
GTEX-117YX-1426-SM-5H12H 5.4
GTEX-ZDYS-1126-SM-5K7UB 5.2
GTEX-11ZTT-2326-SM-5EQLG 5.1
GTEX-ZQG8-0726-SM-5P9H9 4.9
GTEX-XMK1-1126-SM-4IHJ8 4.7
GTEX-YB5E-1726-SM-5IFJ3 4.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

23.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 23.3
FF:10080-102A8 77 years, female 23.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.