Tissue expression of USP20 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	20.9	TPM
GTEx:	12.9	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Medium
Neuronal cells:	High
Neuropil:	Low

Antibody staining	Antibody HPA006287
Endothelial cells	Low
Glial cells	Medium
Neuronal cells	High
Neuropil	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	20.9

Male, age 5

Sample 1
TPM: 19.7

Female, age 40

Sample 2
TPM: 21.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 21.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	12.9

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 14.1

Samples: 114

Max RPKM: 23.8
Min RPKM: 7.9
Std RPKM: 2.6
Median RPKM: 14.5

GTEX-11OF3-2926-SM-5HL78

23.8

GTEX-1117F-3226-SM-5N9CT

18.7

GTEX-13FXS-3126-SM-5J2NN

18.5

GTEX-13FHO-3026-SM-5J1O9

18.4

GTEX-X585-3026-SM-46MWF

18.3

GTEX-13VXU-2926-SM-5LU5C

18.1

GTEX-T6MN-2626-SM-32PMQ

18.1

GTEX-T5JC-2426-SM-3NMDB

17.7

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 11.6

Samples: 108

Max RPKM: 17.9
Min RPKM: 5.2
Std RPKM: 2.8
Median RPKM: 12.1

GTEX-13NYS-0011-R10a-SM-5MR4S

17.9

GTEX-13RTJ-0011-R10b-SM-5O9CW

16.9

GTEX-13CZV-0011-R10b-SM-5LZYD

16.8

GTEX-13X6K-0011-R10a-SM-5P9JR

16.7

GTEX-X585-0011-R10A-SM-46MUY

16.5

GTEX-13O3O-0011-R10a-SM-5LUA9

15.8

GTEX-12WSF-0011-R10a-SM-5LZVH

15.7

GTEX-14ASI-0011-R10b-SM-5S2VZ

15.6

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue