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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:144.4TPM
GTEx:85.1RPKM
FANTOM5:316.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA055893

  

Antibody CAB000084

  

Antibody CAB010307

  

Adipocytes

 Not detected   Not detected   Low  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA055893

  

Antibody CAB000084

  

Antibody CAB010307

  

Adipocytes

 Not detected   Not detected   Low  

Fibroblasts

 Not detected   Not detected   Low  

Peripheral nerve

 Not detected   Not detected   Low  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

144.4
N/A Female, age 80
Sample 1
TPM: 85.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 34.0
N/A Female, age 57
Sample 3
TPM: 36.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 250.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 316.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

85.1

GTEx sample id

RPKM
35.347.463.011.9102.8020406080100120140160
 
35.347.463.011.9102.8020406080100120140160

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 52.7
Samples: 350

Max RPKM: 172.5
Min RPKM: 11.9
Std RPKM: 25.1
Median RPKM: 47.4
GTEX-1128S-2126-SM-5H12U 172.5
GTEX-1399R-2626-SM-5KLZ7 169.5
GTEX-13PVQ-0226-SM-5SIBG 155.3
GTEX-13JVG-0226-SM-5J1MW 149.0
GTEX-14753-0326-SM-5QGQB 138.0
GTEX-ZYFD-0226-SM-5NQ86 130.5
GTEX-XOTO-0226-SM-4B66H 130.2
GTEX-14E6C-0226-SM-5S2N3 127.1
Show all
51.5101.2205.113.9400.6050100150200250300350400450
 
51.5101.2205.113.9400.6050100150200250300350400450

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 135.1
Samples: 227

Max RPKM: 497.6
Min RPKM: 13.9
Std RPKM: 102.6
Median RPKM: 101.2
GTEX-14ICL-0926-SM-5S2TU 497.6
GTEX-ZGAY-1326-SM-5S2NS 441.7
GTEX-ZZ64-0626-SM-5GZWR 400.6
GTEX-13VXT-0926-SM-5LU5K 400.1
GTEX-ZTSS-1026-SM-5985N 396.7
GTEX-WEY5-1326-SM-3GILS 386.7
GTEX-13W3W-1126-SM-5L3DO 370.8
GTEX-ZG7Y-1626-SM-5S2NO 370.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

316.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 316.9
FF:10010-101C1 65,65,76 years, mixed 316.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.