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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:93.5TPM
GTEx:48.9RPKM
FANTOM5:224.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA055893

 

Antibody CAB000084

 

Antibody CAB010307

 

Squamous epithelial cells

Not detected   Low   Medium  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

93.5

overview Female, age 70
Sample 1
TPM: 142.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 45.8
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 92.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

48.9

GTEx sample id

RPKM

33.543.462.610.4105.9020406080100120140
 
33.543.462.610.4105.9020406080100120140

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 48.9
Samples: 286

Max RPKM: 142.8
Min RPKM: 10.4
Std RPKM: 22.3
Median RPKM: 43.4
GTEX-Y9LG-0626-SM-4WWDH 142.8
GTEX-ZYFG-1126-SM-5GICY 135.8
GTEX-14BMU-0926-SM-5S2QB 127.9
GTEX-14C38-2126-SM-5RQJO 113.4
GTEX-RUSQ-0826-SM-47JWW 111.6
GTEX-12KS4-0926-SM-5BC5S 105.9
GTEX-12WSK-1126-SM-5LZV8 100.9
GTEX-14E6E-0726-SM-5S2R3 98.3
GTEX-T5JW-1326-SM-4DM5G 96.2
GTEX-WOFM-0626-SM-4OOS3 94.7
GTEX-144GN-0626-SM-5O9B2 94.5
GTEX-XOTO-2126-SM-4B64U 92.5
GTEX-NPJ8-1926-SM-3MJGB 91.3
GTEX-QLQ7-0926-SM-447BC 91.3
GTEX-145MF-1426-SM-5O9B6 90.1
GTEX-145MO-1426-SM-5Q5BS 89.3
GTEX-VJYA-0726-SM-4KL1T 88.8
GTEX-XLM4-2326-SM-4TT2D 88.2
GTEX-11TT1-0526-SM-5P9JO 87.2
GTEX-PSDG-1326-SM-48TD2 85.1
GTEX-139UW-1126-SM-5IJEJ 84.8
GTEX-WFG8-1226-SM-4V6EI 84.6
GTEX-Y114-0926-SM-4TT7J 84.6
GTEX-YFC4-1226-SM-5LU9R 83.6
GTEX-13CF3-1626-SM-5IFG9 82.9
GTEX-13RTK-0526-SM-5S2QF 81.9
GTEX-13FLV-1126-SM-5J2NO 80.8
GTEX-S4P3-0426-SM-4AD56 79.9
GTEX-WFG7-1126-SM-4LMK3 79.7
GTEX-11XUK-0826-SM-5GU6P 79.4
GTEX-13W3W-1626-SM-5LU35 79.0
GTEX-14E1K-1226-SM-5S2PD 78.6
GTEX-WVLH-1426-SM-4MVNX 78.2
GTEX-QLQW-0526-SM-4R1KS 77.7
GTEX-ZY6K-0626-SM-59HJL 77.6
GTEX-XUZC-0426-SM-4BOPE 76.1
GTEX-WFJO-0826-SM-4LVM5 74.9
GTEX-OIZH-0626-SM-3NB1L 74.3
GTEX-U3ZM-0526-SM-4DXTB 74.3
GTEX-13O1R-1326-SM-5IJF5 73.0
GTEX-OXRL-0626-SM-3NM9C 72.3
GTEX-111YS-0926-SM-5EGGI 72.1
GTEX-V955-1126-SM-4JBH3 71.7
GTEX-13O21-0626-SM-5IJDI 71.6
GTEX-132Q8-1826-SM-5EGIY 70.6
GTEX-YECK-1626-SM-5IFHQ 69.9
GTEX-ZVP2-1326-SM-57WCE 69.9
GTEX-11GSP-1826-SM-5N9DQ 69.6
GTEX-1212Z-2126-SM-5FQTM 69.3
GTEX-ZDYS-0826-SM-4WWCR 68.9
GTEX-OXRK-1326-SM-3NB1A 68.7
GTEX-QEL4-1426-SM-447AC 68.6
GTEX-145LS-1826-SM-5LUAZ 68.3
GTEX-ZYWO-1026-SM-5E45U 68.2
GTEX-R55C-0826-SM-48FCL 68.1
GTEX-11ZU8-1526-SM-5EGHX 67.9
GTEX-11LCK-1726-SM-5S2OQ 67.6
GTEX-QDVN-1026-SM-48TZA 67.4
GTEX-Y8LW-0726-SM-5IFI1 67.1
GTEX-145ME-0526-SM-5QGQV 66.7
GTEX-RU1J-0326-SM-46MUM 66.3
GTEX-XBED-1026-SM-48TCB 66.3
GTEX-13S86-0826-SM-5SI6J 65.8
GTEX-OXRN-1726-SM-3NM9B 64.9
GTEX-P78B-1026-SM-3NMC4 64.6
GTEX-13QBU-1026-SM-5LU3R 64.3
GTEX-XK95-1026-SM-4GIDV 64.3
GTEX-14ICL-0526-SM-5RQJ6 63.0
GTEX-11I78-1526-SM-5A5K7 62.8
GTEX-Q2AH-0826-SM-48TZN 62.8
GTEX-11EMC-2226-SM-5A5JW 62.6
GTEX-132AR-2226-SM-5J2NT 62.6
GTEX-Y3I4-1226-SM-4TT8N 62.6
GTEX-ZT9X-0526-SM-5GCOP 62.6
GTEX-1211K-0926-SM-5FQTL 62.3
GTEX-13PVR-1826-SM-5Q5CC 62.3
GTEX-13111-0826-SM-5LZV3 61.9
GTEX-QDVJ-0726-SM-48U1W 61.7
GTEX-ZTX8-0226-SM-5E44D 61.2
GTEX-1399U-1026-SM-5J1OC 61.0
GTEX-XBEW-1326-SM-4AT63 61.0
GTEX-13OVG-0626-SM-5IFEP 60.9
GTEX-Y5V6-1026-SM-4VBS2 59.2
GTEX-UPK5-1226-SM-4IHL8 57.8
GTEX-12WSD-1826-SM-5GCOA 57.0
GTEX-131XF-0826-SM-5GICG 57.0
GTEX-XUJ4-1026-SM-4BOPB 57.0
GTEX-146FR-0426-SM-5SI97 56.9
GTEX-P4QS-0626-SM-3NMD1 56.8
GTEX-XGQ4-1526-SM-4AT6H 56.8
GTEX-139T6-0626-SM-5IFF9 56.7
GTEX-S341-0526-SM-4AD5U 56.5
GTEX-TMMY-1126-SM-4DXSX 56.1
GTEX-YB5E-0926-SM-4WWDQ 54.9
GTEX-11ONC-1526-SM-5GU6S 54.8
GTEX-WQUQ-1626-SM-4OOSH 54.5
GTEX-XV7Q-1126-SM-4BRVS 54.3
GTEX-Z9EW-0526-SM-5HL8S 54.1
GTEX-13OVJ-1226-SM-5L3HA 53.9
GTEX-13X6H-1326-SM-5LU42 53.8
GTEX-13X6I-1026-SM-5LU4C 53.0
GTEX-S32W-0926-SM-4AD5X 53.0
GTEX-R55G-1026-SM-48FDI 52.8
GTEX-QESD-0826-SM-47J4G 52.4
GTEX-ZZ64-0226-SM-5E44X 52.2
GTEX-R55D-1126-SM-48FEB 52.0
GTEX-RU72-0726-SM-46MUW 51.7
GTEX-S4Q7-0626-SM-4AD5M 51.6
GTEX-11DZ1-2026-SM-5A5KG 51.3
GTEX-12ZZW-1726-SM-5DUVD 51.3
GTEX-ZAB5-0926-SM-5CVMV 50.5
GTEX-SNOS-0626-SM-4DM5F 50.2
GTEX-ZLV1-0526-SM-4WWD4 49.6
GTEX-U8XE-1726-SM-4E3IF 49.4
GTEX-RNOR-1226-SM-48FDQ 49.3
GTEX-RTLS-1126-SM-46MUQ 49.3
GTEX-PVOW-1626-SM-48TC9 49.1
GTEX-S3XE-0926-SM-4AD4S 49.1
GTEX-Y3IK-1126-SM-51MSV 49.1
GTEX-ZF29-1326-SM-4WWB6 48.7
GTEX-11DXX-1126-SM-5GZZK 48.2
GTEX-13FH7-0526-SM-5IJF8 48.2
GTEX-QEG5-1426-SM-447AS 47.9
GTEX-13PVQ-1726-SM-5IFF3 47.7
GTEX-13U4I-1126-SM-5LU3S 47.6
GTEX-1497J-2726-SM-5SI9W 47.6
GTEX-13FTW-1626-SM-5KM4N 47.0
GTEX-RM2N-0726-SM-48FD5 46.7
GTEX-1399S-1326-SM-5P9GH 46.3
GTEX-145MN-1026-SM-5NQ9G 46.3
GTEX-T5JC-1726-SM-4DM6U 46.2
GTEX-ZF3C-1626-SM-4WWB4 46.2
GTEX-144FL-2726-SM-5O98Z 45.7
GTEX-ZVE2-1326-SM-5NQ94 45.1
GTEX-TSE9-1226-SM-4DXTM 44.7
GTEX-UJMC-0926-SM-4IHLK 44.5
GTEX-13D11-1926-SM-5IFGB 44.4
GTEX-QCQG-0626-SM-48U21 44.3
GTEX-YF7O-0926-SM-5IFIF 44.3
GTEX-144GO-2726-SM-5O9A2 43.7
GTEX-PLZ5-0926-SM-3TW8L 43.6
GTEX-PWN1-0626-SM-48TDT 43.6
GTEX-OIZI-1426-SM-3NB1T 43.4
GTEX-XXEK-0326-SM-4BRVV 43.4
GTEX-11DYG-1326-SM-5N9DO 42.9
GTEX-Q2AI-0626-SM-48TZU 42.6
GTEX-131XG-1026-SM-5GCMX 42.4
GTEX-12BJ1-1626-SM-5HL8Y 42.3
GTEX-146FQ-1026-SM-5LU8I 42.2
GTEX-12C56-1226-SM-5FQSU 42.1
GTEX-SUCS-0726-SM-4DM7J 42.0
GTEX-SE5C-1226-SM-4BRWV 41.7
GTEX-139YR-1726-SM-5IFFK 41.6
GTEX-14H4A-1626-SM-5SI69 41.6
GTEX-11EQ9-0726-SM-5A5K2 41.4
GTEX-TKQ1-0326-SM-4DXSM 41.3
GTEX-W5WG-1626-SM-4LMKG 41.2
GTEX-SNMC-0526-SM-4DM69 41.0
GTEX-ZA64-0626-SM-5HL9O 41.0
GTEX-S95S-0426-SM-4B64I 40.8
GTEX-QVUS-0626-SM-447CC 40.7
GTEX-U3ZN-1726-SM-4DXUQ 40.7
GTEX-ZYW4-1326-SM-5E45N 40.5
GTEX-T8EM-0526-SM-4DM64 40.2
GTEX-ZYY3-1526-SM-5SIA9 40.0
GTEX-13OVI-2626-SM-5KM4T 38.9
GTEX-YEC3-2526-SM-4YCDN 38.8
GTEX-11EM3-0826-SM-5N9CC 38.6
GTEX-12WSL-1526-SM-5GCP8 38.6
GTEX-11ZTS-2626-SM-5EGIC 38.5
GTEX-Y5LM-1026-SM-4VDSQ 38.5
GTEX-OOBK-0625-SM-3LK5P 38.4
GTEX-139TU-1226-SM-5J2NL 38.2
GTEX-WRHK-0526-SM-4MVOF 38.2
GTEX-XYKS-1526-SM-4BRUP 38.1
GTEX-X15G-0826-SM-4PQZD 38.0
GTEX-145LT-1126-SM-5LUA1 37.7
GTEX-133LE-0626-SM-5IFFJ 37.1
GTEX-147F3-0826-SM-5NQA7 37.1
GTEX-P4PQ-0626-SM-3NMCU 37.1
GTEX-NFK9-1126-SM-3LK78 37.0
GTEX-WFON-0826-SM-4LVMI 37.0
GTEX-V1D1-1026-SM-4JBHE 36.9
GTEX-ZGAY-1126-SM-4WWBS 36.9
GTEX-XQ8I-1526-SM-4BOOH 36.7
GTEX-PWCY-0726-SM-48TCS 36.6
GTEX-117YX-1626-SM-5GZZG 36.4
GTEX-ZTPG-1626-SM-5DUX2 36.3
GTEX-11P82-0526-SM-5986P 36.2
GTEX-12ZZX-1326-SM-5DUWI 36.2
GTEX-QEG4-0726-SM-4R1JL 36.2
GTEX-11P81-0826-SM-5P9GR 36.0
GTEX-132QS-1426-SM-5P9GE 35.8
GTEX-U4B1-0826-SM-4DXTW 35.7
GTEX-11NUK-1326-SM-5P9GN 35.6
GTEX-ZPU1-1426-SM-4WWFU 35.6
GTEX-R3RS-1326-SM-48FE7 35.4
GTEX-R45C-1226-SM-48FEE 35.4
GTEX-145LV-1326-SM-5S2QI 35.3
GTEX-QV44-1126-SM-4R1KO 35.3
GTEX-RWS6-0826-SM-47JXF 35.2
GTEX-UJHI-0826-SM-4IHLM 35.1
GTEX-11VI4-0526-SM-5EQ48 35.0
GTEX-ZPCL-1426-SM-57WEC 34.9
GTEX-12WSA-1426-SM-5EGJU 34.7
GTEX-111CU-0726-SM-5GZYD 34.6
GTEX-P4QT-0626-SM-3NMCP 34.4
GTEX-131XE-1426-SM-5HL7V 34.2
GTEX-146FH-1726-SM-5QGQ2 34.1
GTEX-R53T-1126-SM-48FD4 34.0
GTEX-14AS3-0626-SM-5QGQD 33.9
GTEX-1122O-1726-SM-5GICM 33.8
GTEX-REY6-1326-SM-48FDO 33.6
GTEX-Y5V5-1626-SM-4VDSG 33.6
GTEX-13OW8-2326-SM-5L3I9 33.5
GTEX-X4LF-0626-SM-4QASB 33.5
GTEX-11NSD-1126-SM-5N9BQ 33.2
GTEX-ZF2S-1226-SM-4WWAX 33.2
GTEX-ZT9W-1326-SM-51MTB 33.2
GTEX-ZUA1-1226-SM-5NQ6O 33.0
GTEX-ZG7Y-1126-SM-4WWEZ 32.6
GTEX-ZVT2-1326-SM-5E45H 32.5
GTEX-UPIC-1026-SM-4IHLT 32.4
GTEX-ZTSS-0626-SM-59867 32.4
GTEX-144GM-1426-SM-5LU31 32.3
GTEX-13NZB-1226-SM-5J2MW 32.2
GTEX-X3Y1-1326-SM-4PQZB 32.0
GTEX-WK11-1026-SM-4OOS8 31.4
GTEX-XQ3S-1126-SM-4BOPK 30.5
GTEX-PLZ4-1626-SM-3P618 29.8
GTEX-WEY5-0926-SM-4LMI4 29.8
GTEX-14DAQ-1426-SM-5RQJD 29.5
GTEX-T6MO-0526-SM-4DM6R 29.5
GTEX-Y8E4-1726-SM-5LU9G 29.3
GTEX-13FTX-0526-SM-5IFGS 29.2
GTEX-P4PP-0626-SM-3NM9X 29.1
GTEX-TML8-1526-SM-4DXUX 29.0
GTEX-T2IS-0826-SM-4DM6L 28.9
GTEX-ZAB4-1126-SM-5HL86 28.8
GTEX-XMK1-1326-SM-4B65Q 28.5
GTEX-Y111-1626-SM-57WCY 28.5
GTEX-13G51-0926-SM-5IFFU 27.9
GTEX-ZQUD-0426-SM-57WFR 27.9
GTEX-14BIN-2726-SM-5RQIE 27.7
GTEX-O5YV-1026-SM-3LK72 27.1
GTEX-ZYVF-2226-SM-5GIDD 27.1
GTEX-11DXY-1426-SM-5N9CN 26.7
GTEX-148VJ-1026-SM-5LU98 26.7
GTEX-PLZ6-0526-SM-3P61C 26.4
GTEX-WH7G-0926-SM-4LVMJ 26.3
GTEX-R55E-1326-SM-48FCR 26.2
GTEX-11TUW-1326-SM-5EQKV 26.1
GTEX-OIZG-1026-SM-3LK5X 26.1
GTEX-S7SF-0926-SM-4AD4M 25.5
GTEX-ZC5H-1326-SM-5HL7E 25.5
GTEX-11DXZ-1226-SM-5H11L 25.4
GTEX-13X6K-2126-SM-5O9D4 25.4
GTEX-XMD2-1326-SM-4YCET 24.9
GTEX-12696-1326-SM-5FQTJ 24.7
GTEX-ZZPT-1426-SM-5N9C5 24.3
GTEX-13FHO-1726-SM-5IFGM 23.7
GTEX-11P7K-1326-SM-5BC5G 23.4
GTEX-13W46-1926-SM-5J2MF 23.2
GTEX-RVPV-0526-SM-47JYL 23.1
GTEX-ZXES-1126-SM-5GZXN 23.1
GTEX-U3ZH-1026-SM-4DXUZ 22.8
GTEX-S33H-0826-SM-4AD5Y 22.5
GTEX-X585-1226-SM-46MW7 22.0
GTEX-X4EO-1226-SM-4QARR 21.9
GTEX-1399R-0826-SM-5IJEL 21.8
GTEX-N7MT-0326-SM-48TDP 21.6
GTEX-13O3Q-0826-SM-5IFGF 21.5
GTEX-X62O-2226-SM-46MW3 20.8
GTEX-X4XY-1726-SM-46MVO 20.1
GTEX-1399Q-1126-SM-5P9JA 20.0
GTEX-YJ89-1526-SM-5P9IR 19.8
GTEX-12ZZY-1426-SM-5N9EI 19.7
GTEX-ZYT6-1126-SM-5GZYR 19.0
GTEX-117YW-1926-SM-5H121 18.4
GTEX-RN64-1026-SM-48FDX 17.7
GTEX-VUSG-1226-SM-4KKZF 16.6
GTEX-131YS-1426-SM-5IJF7 15.8
GTEX-OXRP-0926-SM-48TC1 15.8
GTEX-ZE9C-1126-SM-4WWBD 13.8
GTEX-13QJ3-1726-SM-5RQK9 13.6
GTEX-14A6H-1326-SM-5NQBC 10.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

224.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 224.9
FF:10015-101C6 68,74,75 years, mixed 224.9

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