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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.5TPM
GTEx:11.0RPKM
FANTOM5:147.4Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:Medium
 

Antibody staining

Antibody HPA055893

 

Antibody CAB000084

 

Antibody CAB010307

 

Bile duct cells

Not detected   Not detected   Low  

Hepatocytes

Not detected   Medium   Medium  
     
     
     

LIVER - HPA RNA-seq

Average TPM

31.5

N/A Female, age 60
Sample 1
TPM: 43.9
overview Male, age 54
Sample 2
TPM: 69.7
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 39.0
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 13.9
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 7.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 15.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 72.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 35.7
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 5.6
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 11.7
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 11.0
Samples: 119

Max RPKM: 67.2
Min RPKM: 0.6
Std RPKM: 11.9
Median RPKM: 6.2
GTEX-RWSA-1426-SM-47JXA 67.2
GTEX-ZVT4-0626-SM-5E45T 52.8
GTEX-14E1K-0326-SM-5S2PE 48.7
GTEX-YB5E-0326-SM-5IFHU 40.7
GTEX-14753-1626-SM-5NQ9L 40.6
GTEX-13O3O-1826-SM-5IFGW 36.5
GTEX-ZF29-2026-SM-4WWB7 32.1
GTEX-X4EO-1126-SM-4QARQ 31.9
GTEX-XOTO-0826-SM-4B65O 31.8
GTEX-QDVN-0826-SM-48TZ2 30.1
GTEX-131XE-0326-SM-5LZVO 29.7
GTEX-13FTW-1126-SM-5J2NV 29.5
GTEX-12KS4-1326-SM-5LUB3 28.3
GTEX-11GSP-0626-SM-5986T 27.1
GTEX-YFC4-1526-SM-5IFJS 26.9
GTEX-QESD-2026-SM-447BI 24.3
GTEX-RM2N-1926-SM-48FCU 24.3
GTEX-VUSG-0126-SM-4KL1X 23.4
GTEX-147F4-1426-SM-5LUA8 21.9
GTEX-145MO-2326-SM-5NQ9K 19.7
GTEX-144GM-1326-SM-5LU5E 18.2
GTEX-1269C-0626-SM-5FQSS 17.7
GTEX-13PVR-0126-SM-5S2PY 16.9
GTEX-Z9EW-0426-SM-5CVM9 16.4
GTEX-WYVS-1926-SM-4PQZ2 16.3
GTEX-YEC4-0826-SM-5P9FV 16.3
GTEX-139YR-0226-SM-5IFEM 16.2
GTEX-X4XY-1626-SM-46MVN 14.7
GTEX-12WSD-1426-SM-5GCN9 14.6
GTEX-S32W-1926-SM-4AD63 14.5
GTEX-UPIC-0926-SM-4IHLV 14.3
GTEX-UTHO-2426-SM-4JBHD 14.2
GTEX-13FLV-0326-SM-5N9DJ 13.9
GTEX-QEL4-1226-SM-447A4 13.6
GTEX-TKQ2-1726-SM-4DXUP 13.1
GTEX-ZVP2-0626-SM-51MSO 13.1
GTEX-13QJC-0726-SM-5RQJK 12.2
GTEX-ZTPG-1426-SM-51MT3 11.9
GTEX-12WSL-0226-SM-5CVMJ 11.0
GTEX-14C38-1526-SM-5RQJ7 10.3
GTEX-ZZPU-0426-SM-5GZYH 10.3
GTEX-Q734-0326-SM-48U15 10.0
GTEX-ZPU1-0826-SM-57WG2 9.9
GTEX-YECK-1926-SM-4W21H 9.4
GTEX-ZAB4-0826-SM-5LU9D 9.3
GTEX-11EQ9-0526-SM-5A5JZ 9.1
GTEX-S4Z8-0526-SM-4AD4T 8.9
GTEX-13OW6-2626-SM-5IFF2 8.7
GTEX-P78B-1326-SM-3P611 7.8
GTEX-12WSI-0226-SM-5GCNA 7.6
GTEX-Y5LM-0426-SM-4VBRO 7.4
GTEX-UPK5-1426-SM-4JBHH 7.3
GTEX-14A5I-1726-SM-5QGQ5 7.2
GTEX-145MF-0826-SM-5QGQA 7.1
GTEX-12696-0826-SM-5EGGE 7.0
GTEX-139TU-0826-SM-5IJFG 6.9
GTEX-145LU-1326-SM-5LU9N 6.5
GTEX-146FH-1526-SM-5NQBU 6.4
GTEX-13N11-0926-SM-5IJG2 6.3
GTEX-Y5V5-0926-SM-4VBPZ 6.2
GTEX-13SLX-1226-SM-5S2Q6 6.1
GTEX-139TS-1426-SM-5IFJD 5.9
GTEX-SJXC-1226-SM-4DM78 5.9
GTEX-13NZ9-1326-SM-5MR3V 5.7
GTEX-ZYY3-0626-SM-5NQ6W 5.7
GTEX-1497J-0726-SM-5Q5D1 5.6
GTEX-11ZTS-1426-SM-5EQMM 5.5
GTEX-WFON-1726-SM-4LVMQ 5.4
GTEX-WQUQ-1926-SM-4OOSA 5.4
GTEX-11ZUS-2526-SM-59872 5.1
GTEX-13112-1426-SM-5EGH8 5.0
GTEX-13113-1326-SM-5GCOI 5.0
GTEX-U3ZN-0226-SM-3DB8D 4.9
GTEX-X4EP-1026-SM-4QAS5 4.9
GTEX-13NZB-0626-SM-5IFH6 4.7
GTEX-13N2G-0926-SM-5IFGJ 4.4
GTEX-147JS-1126-SM-5RQIW 4.4
GTEX-R53T-0326-SM-48FEC 4.4
GTEX-REY6-1226-SM-48FDR 4.4
GTEX-11WQC-0726-SM-5EQMR 4.3
GTEX-1212Z-0226-SM-59HLF 4.3
GTEX-QEG4-1826-SM-4R1JN 4.0
GTEX-13NYB-1026-SM-5IFH3 3.6
GTEX-11ZVC-0726-SM-5FQT9 3.5
GTEX-14DAQ-1726-SM-5S2R2 3.5
GTEX-S33H-1626-SM-4AD68 3.5
GTEX-11DXZ-0126-SM-5EGGY 3.3
GTEX-11NUK-1226-SM-5P9GM 3.3
GTEX-Q2AG-1126-SM-48U1P 3.3
GTEX-XBEC-1526-SM-4AT68 3.1
GTEX-131YS-1626-SM-5HL6C 2.7
GTEX-11DXY-0526-SM-5EGGQ 2.6
GTEX-12WSG-0626-SM-5FQTQ 2.5
GTEX-1399R-1226-SM-5P9GF 2.5
GTEX-1399T-0826-SM-5IFES 2.5
GTEX-X261-1726-SM-4PQYT 2.5
GTEX-X3Y1-2726-SM-4PQZH 2.5
GTEX-ZVT3-1626-SM-5GU66 2.5
GTEX-RU72-1426-SM-46MUF 2.4
GTEX-QV44-0326-SM-4R1KD 2.3
GTEX-WZTO-0626-SM-4PQYY 2.3
GTEX-13FTZ-0726-SM-5IFFY 2.0
GTEX-RTLS-1326-SM-46MUN 2.0
GTEX-132NY-0926-SM-5P9G3 1.9
GTEX-14AS3-0126-SM-5Q5F4 1.8
GTEX-ZF2S-3026-SM-4WWCH 1.8
GTEX-PX3G-0826-SM-48TZS 1.7
GTEX-131XH-0626-SM-5LZWH 1.6
GTEX-T6MN-1226-SM-3NMA5 1.6
GTEX-ZAB5-0426-SM-5CVMI 1.5
GTEX-11NV4-1326-SM-5HL6V 1.4
GTEX-12ZZZ-1326-SM-59HKW 1.3
GTEX-13VXU-0926-SM-5IFFH 1.3
GTEX-OOBJ-0826-SM-3NB2K 1.3
GTEX-12WSM-0726-SM-5GCOW 1.2
GTEX-RN64-1826-SM-48FDV 1.2
GTEX-RNOR-1426-SM-48FDJ 0.9
GTEX-11OF3-0726-SM-5BC4Z 0.7
GTEX-ZYT6-0626-SM-5E45V 0.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

147.4

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 147.4
FF:10018-101C9 64,69,70 years, mixed 147.4

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