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SCARB2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:94.4TPM
GTEx:45.6RPKM
FANTOM5:176.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Medium
Peripheral nerve:Not available
 
 
 

Antibody staining

Antibody HPA018014

  

Antibody CAB015415

  

Adipocytes

 High   Medium  

Chondrocytes

 High  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA018014

  

Antibody CAB015415

  

Adipocytes

 High   Medium  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Not detected   Low  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

94.4
N/A Female, age 80
Sample 1
TPM: 92.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 87.5
N/A Female, age 57
Sample 3
TPM: 77.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 107.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 108.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

45.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 46.7
Samples: 350

Max RPKM: 94.7
Min RPKM: 22.6
Std RPKM: 8.9
Median RPKM: 45.5
GTEX-QDT8-0226-SM-32PL4 94.7
GTEX-POYW-0726-SM-2XCEO 81.1
GTEX-13FHO-0326-SM-5IJBH 80.8
GTEX-R55F-1426-SM-2TF53 80.5
GTEX-13JVG-0226-SM-5J1MW 78.2
GTEX-POMQ-2326-SM-5S2VS 74.7
GTEX-111VG-2326-SM-5N9BK 68.8
GTEX-146FQ-0226-SM-5NQAL 67.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 43.8
Samples: 227

Max RPKM: 101.1
Min RPKM: 25.1
Std RPKM: 11.8
Median RPKM: 43
GTEX-13FHO-2026-SM-5J1OA 101.1
GTEX-ZYW4-2226-SM-5GZYG 77.1
GTEX-13O3P-0926-SM-5IFFI 76.9
GTEX-ZTPG-2326-SM-57WFL 76.0
GTEX-UPK5-1826-SM-3GAEB 74.7
GTEX-132AR-0526-SM-5J2MJ 73.8
GTEX-ZPU1-1226-SM-5HL71 72.4
GTEX-ZT9X-0926-SM-5O9C4 70.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

176.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 176.5
FF:10010-101C1 65,65,76 years, mixed 176.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.