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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:34.9RPKM
FANTOM5:147.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA018014

 

Antibody CAB015415

 

Glial cells

High   High  

Neuronal cells

High   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

34.9

GTEx sample id

RPKM

28.232.839.013.451.4010203040506070
 
28.232.839.013.451.4010203040506070

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 34.9
Samples: 117

Max RPKM: 73.5
Min RPKM: 13.4
Std RPKM: 10.3
Median RPKM: 32.8
GTEX-QMR6-0011-R5A-SM-32PKT 73.5
GTEX-PVOW-0011-R5A-SM-32PL7 65.2
GTEX-12WSA-0011-R5b-SM-5GU5I 62.8
GTEX-12WSB-0011-R5b-SM-5GU67 58.6
GTEX-N7MS-0011-R5a-SM-2HMK8 57.4
GTEX-11H98-0011-R5b-SM-57WCF 55.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 51.4
GTEX-X4XX-0011-R5A-SM-46MWN 51.2
GTEX-WL46-0011-R5A-SM-3LK6V 50.7
GTEX-P44H-0011-R5A-SM-2XCEX 50.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 50.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 48.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 48.3
GTEX-WZTO-0011-R5B-SM-3NMC5 48.1
GTEX-13X6I-0011-R5a-SM-5PNWW 47.9
GTEX-NPJ7-0011-R5a-SM-33HBK 47.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 47.1
GTEX-R55E-0011-R5A-SM-2TC5N 46.3
GTEX-WVLH-0011-R5A-SM-3MJFW 46.0
GTEX-RVPV-0011-R5A-SM-2TF69 45.6
GTEX-WWYW-0011-R5A-SM-3NB3E 44.1
GTEX-Z93S-0011-R5b-SM-4RGNI 44.0
GTEX-13O3O-0011-R5b-SM-5KM44 43.5
GTEX-13JVG-0011-R5a-SM-5MR4O 42.6
GTEX-QVJO-0011-R5A-SM-2S1QM 42.0
GTEX-131YS-0011-R5b-SM-5K7YB 41.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 41.0
GTEX-11NV4-0011-R5a-SM-5NQ88 40.6
GTEX-T2IS-0011-R5A-SM-32QP4 39.2
GTEX-12WSF-0011-R5a-SM-5HL8K 39.0
GTEX-S7SE-0011-R5A-SM-2XCDA 39.0
GTEX-11WQC-0011-R5a-SM-5BC74 38.8
GTEX-13OW6-0011-R5a-SM-5O9BK 38.8
GTEX-X585-0011-R5A-SM-46MVI 38.5
GTEX-11GSP-0011-R5a-SM-57WBE 38.3
GTEX-XMD1-0011-R5A-SM-4AT47 38.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 37.9
GTEX-13FLV-0011-R5a-SM-5LZWT 37.5
GTEX-13NYB-0011-R5a-SM-5MR45 37.4
GTEX-NL4W-0011-R5a-SM-2I3GD 36.3
GTEX-XOTO-0011-R5A-SM-4B657 36.3
GTEX-144GL-0011-R5b-SM-5PNUJ 35.5
GTEX-13OVL-0011-R5b-SM-5L3FU 35.2
GTEX-145LS-0011-R5a-SM-5SI65 35.2
GTEX-YFC4-0011-R5a-SM-4RGLR 35.2
GTEX-13X6K-0011-R5b-SM-5PNUE 35.1
GTEX-ZUA1-0011-R5b-SM-51MTG 35.1
GTEX-13OVH-0011-R5b-SM-5KM4L 34.8
GTEX-ZE7O-0011-R5a-SM-57WBO 34.6
GTEX-132Q8-0011-R5a-SM-5IJDM 34.5
GTEX-13FXS-0011-R5b-SM-5LZYE 34.5
GTEX-ZXG5-0011-R5b-SM-57WBN 34.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 34.2
GTEX-1445S-0011-R5a-SM-5PNUS 34.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 33.7
GTEX-OHPN-0011-R5A-SM-2I5FF 33.3
GTEX-ZVT3-0011-R5a-SM-51MSI 33.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 32.9
GTEX-RVPU-0011-R5A-SM-2XCAD 32.8
GTEX-14BIN-0011-R5b-SM-5SI78 32.4
GTEX-14ABY-0011-R5b-SM-5SI7B 32.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 32.1
GTEX-13OW7-0011-R5b-SM-5O9DM 31.9
GTEX-13CZV-0011-R5a-SM-5K7XA 31.6
GTEX-N7MT-0011-R5a-SM-2I3G6 31.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 31.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 31.4
GTEX-144GO-0011-R5a-SM-5PNUR 31.4
GTEX-UTHO-0011-R5A-SM-3GIJD 31.4
GTEX-13112-0011-R5b-SM-5DUV8 30.9
GTEX-12ZZX-0011-R5a-SM-5HL89 30.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 30.3
GTEX-13FLW-0011-R5a-SM-5LZX6 30.2
GTEX-RU72-0011-R5A-SM-2TF6U 30.2
GTEX-12WSD-0011-R5b-SM-5CVNG 30.1
GTEX-13G51-0011-R5a-SM-5L3EB 30.1
GTEX-139TT-0011-R5b-SM-5K7W8 29.8
GTEX-T6MN-0011-R5A-SM-32QPD 29.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 29.6
GTEX-139T8-0011-R5b-SM-5J1MO 29.5
GTEX-139TS-0011-R5b-SM-5J2MZ 29.2
GTEX-X261-0011-R5A-SM-3NMB4 29.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 28.5
GTEX-145MH-0011-R5a-SM-5P9JT 28.5
GTEX-1399T-0011-R5b-SM-5IJDK 28.4
GTEX-13NYS-0011-R5a-SM-5MR4D 28.4
GTEX-13JUV-0011-R5a-SM-5LZY5 28.3
GTEX-13S7M-0011-R5b-SM-5P9HS 28.2
GTEX-13X6J-0011-R5b-SM-5PNWT 28.2
GTEX-OXRN-0011-R5A-SM-2I5EF 28.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 27.6
GTEX-T5JC-0011-R5A-SM-32PLK 27.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 27.6
GTEX-13SLX-0011-R5a-SM-5O9BV 27.1
GTEX-1313W-0011-R5b-SM-5L3EP 27.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 26.9
GTEX-13VXU-0011-R5a-SM-5O9D7 26.8
GTEX-14BIM-0011-R5b-SM-5S2RM 26.6
GTEX-13FHP-0011-R5b-SM-5LZY2 26.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 26.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 25.7
GTEX-11OF3-0011-R5a-SM-57WB4 25.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 25.4
GTEX-NL3H-0011-R5a-SM-2I3GB 25.2
GTEX-12WSC-0011-R5b-SM-5CVNS 24.8
GTEX-S7PM-0011-R5A-SM-3NM8G 24.3
GTEX-13CF2-0011-R5a-SM-5LZWS 24.2
GTEX-TSE9-0011-R5A-SM-3DB7J 24.2
GTEX-13OW5-0011-R5b-SM-5L3FR 23.6
GTEX-ZV68-0011-R5a-SM-4YCDW 23.6
GTEX-11UD1-0011-R5b-SM-5P9FP 22.1
GTEX-12WSH-0011-R5b-SM-5P9F3 20.4
GTEX-13CIG-0011-R5b-SM-5L3F2 19.6
GTEX-1477Z-0011-R5b-SM-5PNUO 19.3
GTEX-YJ89-0011-R5a-SM-4V6GM 18.0
GTEX-145MG-0011-R5b-SM-5S2VU 13.7
GTEX-13NZA-0011-R5b-SM-5KM4K 13.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

147.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 147.3
FF:10379-105H1 89 years, female 165.0
FF:10164-103B2 76 years, female 129.6

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