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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:180.4TPM
GTEx:32.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:High
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA018014

 

Antibody CAB015415

 

Endothelial cells

High   Medium  

Glial cells

High   High  

Neuronal cells

High   High  

Neuropil

Low   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

180.4

N/A Male, age 5
Sample 1
TPM: 140.7
overview Female, age 40
Sample 2
TPM: 232.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 167.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

32.7

GTEx sample id

RPKM

24.728.532.515.343.305101520253035404550
 
24.728.532.515.343.305101520253035404550

Brain - Cortex

Brain - Cortex
RPKM: 29.4
Samples: 114

Max RPKM: 53.9
Min RPKM: 15.3
Std RPKM: 6.7
Median RPKM: 28.5
GTEX-13G51-3026-SM-5IJB8 53.9
GTEX-QMR6-1426-SM-32PLA 52.2
GTEX-UTHO-3026-SM-3GAFB 48.2
GTEX-QDT8-2926-SM-32PKC 47.3
GTEX-13FHO-3026-SM-5J1O9 43.3
GTEX-PVOW-2526-SM-2XCF7 42.6
GTEX-QVUS-2826-SM-3GADB 42.6
GTEX-1192X-3126-SM-5N9BY 40.2
GTEX-13OVJ-2826-SM-5L3GW 40.2
GTEX-XLM4-3026-SM-4AT6L 40.0
GTEX-144FL-3026-SM-5O99C 39.5
GTEX-13FLW-1426-SM-5K7YE 35.8
GTEX-111FC-3126-SM-5GZZ2 35.6
GTEX-12ZZY-3026-SM-5GCOU 35.2
GTEX-13NYB-3026-SM-5IJD7 35.2
GTEX-TSE9-3026-SM-3DB76 35.1
GTEX-11DXY-3226-SM-5GIDE 35.0
GTEX-1313W-3126-SM-5LZUI 34.6
GTEX-13FHP-3026-SM-5IJBS 34.5
GTEX-NPJ8-1526-SM-2D7VU 34.5
GTEX-11GS4-3126-SM-5A5LH 34.4
GTEX-N7MT-1126-SM-5SI7V 34.4
GTEX-WZTO-2926-SM-3NM9I 34.3
GTEX-13OW8-2826-SM-5L3GC 34.0
GTEX-ZAK1-3026-SM-5S2MJ 34.0
GTEX-WL46-2926-SM-3LK82 33.9
GTEX-11ONC-2926-SM-5P9JM 32.8
GTEX-13NYC-2826-SM-5K7WR 32.7
GTEX-T5JC-2426-SM-3NMDB 32.6
GTEX-12ZZZ-3026-SM-5BC67 32.1
GTEX-13JVG-3126-SM-5L3FH 32.1
GTEX-WHSE-3026-SM-3P5ZH 31.8
GTEX-QVJO-1426-SM-2S1QY 31.7
GTEX-T6MN-2626-SM-32PMQ 31.7
GTEX-WVLH-3026-SM-3MJG9 31.4
GTEX-14BMV-3026-SM-5S2PQ 31.3
GTEX-11NUK-2926-SM-5A5MD 31.2
GTEX-NPJ7-2726-SM-2I3FT 31.0
GTEX-XOTO-3026-SM-4B65M 31.0
GTEX-X585-3026-SM-46MWF 30.8
GTEX-13OW6-3026-SM-5J2MI 30.6
GTEX-YFC4-3126-SM-5PNV6 30.6
GTEX-132Q8-3026-SM-5PNVG 30.5
GTEX-RNOR-2326-SM-2TF4I 30.3
GTEX-X4XX-3026-SM-3NMB2 30.3
GTEX-WWYW-3126-SM-3NB39 30.0
GTEX-11WQK-3026-SM-5EQL6 29.9
GTEX-T2IS-3026-SM-32QPM 29.6
GTEX-13PVQ-3026-SM-5SI93 29.5
GTEX-145LS-3126-SM-5Q5BY 29.2
GTEX-145MH-3026-SM-5Q5DZ 29.1
GTEX-13FXS-3126-SM-5J2NN 29.0
GTEX-13OVH-3026-SM-5MR4N 29.0
GTEX-131YS-3126-SM-5KLYT 28.9
GTEX-14A5I-2926-SM-5Q5CQ 28.7
GTEX-14ASI-3026-SM-5S2PN 28.7
GTEX-139T8-1026-SM-5J2MC 28.6
GTEX-11GSO-2926-SM-5HL73 28.4
GTEX-12ZZX-2926-SM-5GCOQ 28.3
GTEX-13X6K-2926-SM-5Q5D5 28.3
GTEX-Y8DK-0826-SM-4TT3T 28.3
GTEX-1399T-3026-SM-5KLZC 28.2
GTEX-RU72-3026-SM-5SI7Y 27.8
GTEX-11GSP-3226-SM-5986O 27.6
GTEX-OXRN-2426-SM-2I5EQ 27.6
GTEX-ZZPT-3026-SM-5GZXH 27.6
GTEX-13QIC-2926-SM-5J2NF 27.5
GTEX-117XS-3026-SM-5N9CA 27.2
GTEX-11EI6-3026-SM-5GZZO 27.1
GTEX-11O72-2926-SM-5BC4V 27.0
GTEX-144GL-3026-SM-5Q5CW 27.0
GTEX-ZUA1-3026-SM-59HJC 27.0
GTEX-11PRG-2926-SM-5987A 26.9
GTEX-1128S-2726-SM-5H12C 26.5
GTEX-13OW7-3026-SM-5L3GY 26.5
GTEX-12WSD-3126-SM-5HL7P 26.3
GTEX-12WSH-3026-SM-5CVNI 26.1
GTEX-1445S-3026-SM-5O9BR 25.8
GTEX-13O3O-3126-SM-5KM3H 25.7
GTEX-PWO3-0926-SM-2I5EY 25.3
GTEX-11DXW-1126-SM-5H12Q 25.2
GTEX-ZYFD-3026-SM-5E44C 25.2
GTEX-11TTK-2926-SM-5PNYP 25.0
GTEX-13NYS-3126-SM-5KLYV 25.0
GTEX-13X6J-3026-SM-5Q5CU 24.9
GTEX-13S7M-3126-SM-5RQJQ 24.6
GTEX-11ZUS-2926-SM-5FQSL 24.5
GTEX-12WSC-3026-SM-5GCNF 24.3
GTEX-131XW-3126-SM-5LZUC 24.2
GTEX-13PL6-3126-SM-5LUAR 24.2
GTEX-13SLX-3126-SM-5S2Q5 23.9
GTEX-ZVT3-3026-SM-5E43N 23.8
GTEX-145MG-3026-SM-5RQJA 23.6
GTEX-R55F-1326-SM-5S2V4 23.5
GTEX-145MF-2726-SM-5O995 23.3
GTEX-13O3Q-2926-SM-5KM45 23.2
GTEX-12WSA-2926-SM-5EQ4D 23.1
GTEX-13VXU-2926-SM-5LU5C 23.1
GTEX-13IVO-2926-SM-5L3CZ 22.8
GTEX-Z93S-2926-SM-57WB9 22.8
GTEX-12126-1026-SM-5P9JJ 22.7
GTEX-12ZZW-2926-SM-5LZUP 22.7
GTEX-Q2AG-2926-SM-2HMJ3 21.9
GTEX-1117F-3226-SM-5N9CT 21.6
GTEX-ZAJG-3126-SM-5HL9J 21.6
GTEX-ZE7O-3126-SM-5HL5X 21.3
GTEX-11EMC-3226-SM-5EGKW 21.0
GTEX-Y111-2726-SM-4TT3N 20.8
GTEX-YJ89-3026-SM-5IFJI 20.8
GTEX-11OC5-0726-SM-5P9JK 19.7
GTEX-13JUV-2926-SM-5LZX7 19.5
GTEX-11OF3-2926-SM-5HL78 18.9
GTEX-11NV4-2126-SM-5N9DS 16.7
GTEX-147GR-3026-SM-5S2ML 15.3
Show all
29.033.841.715.560.60102030405060708090
 
29.033.841.715.560.60102030405060708090

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 36.2
Samples: 108

Max RPKM: 94.9
Min RPKM: 15.5
Std RPKM: 11.7
Median RPKM: 33.8
GTEX-QDT8-0011-R10A-SM-32PKG 94.9
GTEX-X4EP-0011-R10B-SM-4QASJ 81.8
GTEX-XMD1-0011-R10A-SM-4AT4A 60.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 59.4
GTEX-13FLW-0011-R10b-SM-5LZZF 56.4
GTEX-QMR6-0011-R10A-SM-32PKO 53.9
GTEX-P44H-0011-R10A-SM-2XCEK 52.9
GTEX-QVUS-0011-R10A-SM-3GIK3 52.7
GTEX-13FHO-0011-R10b-SM-5J2MM 52.0
GTEX-S7SE-0011-R10A-SM-2XCDF 52.0
GTEX-WWYW-0011-R10A-SM-3NB35 51.5
GTEX-13X6K-0011-R10a-SM-5P9JR 51.1
GTEX-WVLH-0011-R10A-SM-3MJFM 49.3
GTEX-XLM4-0011-R10A-SM-4AT5P 49.0
GTEX-13CZV-0011-R10b-SM-5LZYD 45.6
GTEX-T6MN-0011-R10A-SM-32QP7 44.5
GTEX-11H98-0011-R10b-SM-5NQ98 44.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.8
GTEX-13N2G-0011-R10a-SM-5MR34 43.7
GTEX-X585-0011-R10A-SM-46MUY 43.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 43.6
GTEX-12WSD-0011-R10b-SM-5GU79 43.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 43.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 43.3
GTEX-WL46-0011-R10A-SM-3MJFQ 42.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 41.9
GTEX-13S7M-0011-R10b-SM-5PNZB 41.9
GTEX-131YS-0011-R10b-SM-5EQ5N 41.6
GTEX-YFC4-0011-R10a-SM-4SOK5 41.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 40.9
GTEX-145MH-0011-R10b-SM-5PNUK 40.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 40.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 39.4
GTEX-X4XX-0011-R10B-SM-46MWO 39.3
GTEX-12WSM-0011-R10a-SM-5DUWV 38.9
GTEX-13X6I-0011-R10a-SM-5PNWI 38.8
GTEX-145MG-0011-R10a-SM-5PNWG 38.5
GTEX-13OVL-0011-R10a-SM-5L3GS 38.3
GTEX-T5JC-0011-R10A-SM-32PM2 38.2
GTEX-11ZUS-0011-R10b-SM-5BC79 37.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 37.8
GTEX-14BIL-0011-R10a-SM-5SI75 37.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 37.1
GTEX-WZTO-0011-R10B-SM-4E3KB 36.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 36.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 36.0
GTEX-145LU-0011-R10a-SM-5PNWJ 35.0
GTEX-131XH-0011-R10a-SM-5EGLJ 34.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 34.6
GTEX-ZUA1-0011-R10a-SM-51MT6 34.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 34.2
GTEX-N7MT-0011-R10A-SM-2I3E1 34.2
GTEX-13O3Q-0011-R10b-SM-5KM39 34.1
GTEX-12WSF-0011-R10a-SM-5LZVH 34.0
GTEX-13SLW-0011-R10a-SM-5S2UI 33.6
GTEX-13X6J-0011-R10b-SM-5PNWA 33.6
GTEX-12WSE-0011-R10b-SM-5P9JV 33.4
GTEX-1313W-0011-R10b-SM-5DUXA 33.3
GTEX-12WSA-0011-R10b-SM-5P9ET 33.2
GTEX-13QIC-0011-R10a-SM-5O9C7 33.1
GTEX-145LS-0011-R10a-SM-5PNUQ 33.0
GTEX-12126-0011-R10b-SM-5BC6T 32.4
GTEX-1445S-0011-R10a-SM-5PNWB 32.3
GTEX-RVPU-0011-R10A-SM-2XCAH 32.3
GTEX-YJ89-0011-R10a-SM-4SOK9 32.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 32.2
GTEX-13N1W-0011-R10b-SM-5MR4H 32.1
GTEX-13OW8-0011-R10a-SM-5L3H6 32.1
GTEX-OXRN-0011-R10A-SM-2I5GC 32.0
GTEX-11WQK-0011-R10a-SM-5BC6R 31.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 31.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 31.7
GTEX-12WSC-0011-R10a-SM-5GU57 31.2
GTEX-12WSH-0011-R10a-SM-5LZUS 31.2
GTEX-N7MS-0011-R10A-SM-2HMJK 30.8
GTEX-13FXS-0011-R10a-SM-5J2MA 30.5
GTEX-NL3H-0011-R10A-SM-2I3E9 30.4
GTEX-14BIN-0011-R10a-SM-5S2UA 30.0
GTEX-13QJC-0011-R10a-SM-5SI63 29.9
GTEX-TSE9-0011-R10A-SM-3DB7O 29.3
GTEX-13G51-0011-R10b-SM-5LZYF 29.0
GTEX-ZF28-0011-R10a-SM-4WWEH 29.0
GTEX-13JVG-0011-R10b-SM-5KM2P 28.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 28.3
GTEX-13JUV-0011-R10b-SM-5LZXR 28.0
GTEX-147GR-0011-R10b-SM-5S2UM 28.0
GTEX-13OW6-0011-R10a-SM-5L3HE 27.9
GTEX-Z93S-0011-R10a-SM-4RGNM 27.0
GTEX-13O3O-0011-R10a-SM-5LUA9 26.9
GTEX-147F4-0011-R10b-SM-5S2WC 26.8
GTEX-139TS-0011-R10a-SM-5K7TU 26.7
GTEX-ZVT3-0011-R10b-SM-57WB6 25.4
GTEX-X261-0011-R10B-SM-4E3JT 25.1
GTEX-13NYB-0011-R10a-SM-5KM43 24.9
GTEX-11WQC-0011-R10a-SM-57WCT 24.6
GTEX-13OW7-0011-R10a-SM-5L3H3 24.5
GTEX-13NYS-0011-R10a-SM-5MR4S 24.4
GTEX-14753-0011-R10b-SM-5S2WE 24.3
GTEX-NL4W-0011-R10A-SM-2I3DY 24.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 23.7
GTEX-13SLX-0011-R10a-SM-5P9HV 23.7
GTEX-ZV68-0011-R10a-SM-51MT7 21.3
GTEX-ZXG5-0011-R10a-SM-57WDD 20.9
GTEX-OXRO-0011-R10A-SM-2I5EH 20.8
GTEX-1477Z-0011-R10b-SM-5S2RF 20.4
GTEX-13NZA-0011-R10b-SM-5KM54 18.9
GTEX-131XW-0011-R10a-SM-5DUVA 17.9
GTEX-13IVO-0011-R10a-SM-5LZY3 15.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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