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LLPH

SOFT TISSUE - Expression summary

RNA expression
HPA:25.3TPM
GTEx:3.1RPKM
FANTOM5:37.5Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

25.3
N/A Female, age 80
Sample 1
TPM: 22.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 21.9
N/A Female, age 57
Sample 3
TPM: 21.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 33.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 27.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

3.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 2.9
Samples: 350

Max RPKM: 6.4
Min RPKM: 1.3
Std RPKM: 0.7
Median RPKM: 2.9
GTEX-QEL4-0326-SM-3GAE5 6.4
GTEX-OIZI-0226-SM-2XCEE 6.0
GTEX-O5YT-0226-SM-32PK5 5.9
GTEX-13O1R-0226-SM-5K7U5 5.5
GTEX-Y5V6-2526-SM-5IFJV 5.5
GTEX-S341-1626-SM-3K2B8 5.1
GTEX-13O61-2426-SM-5J1NV 4.9
GTEX-11EMC-2826-SM-5PNY6 4.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 3.3
Samples: 227

Max RPKM: 6
Min RPKM: 1.6
Std RPKM: 0.8
Median RPKM: 3.1
GTEX-Y5LM-0826-SM-4VDSW 6.0
GTEX-1339X-0726-SM-5L3FF 5.8
GTEX-ZA64-0926-SM-5HL7H 5.8
GTEX-11WQK-1526-SM-5EGKN 5.7
GTEX-117YX-0726-SM-5GIET 5.5
GTEX-Y114-1326-SM-4TT9A 5.4
GTEX-11EM3-1126-SM-5A5KM 5.2
GTEX-13O61-1926-SM-5KM1R 5.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

37.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 37.5
FF:10010-101C1 65,65,76 years, mixed 37.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.