Tissue expression of SMARCC2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	77.0	TPM
GTEx:	34.1	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	High
Neuronal cells:	High
Neuropil:	Not detected

Antibody staining	Antibody HPA021213	Antibody CAB004321
Endothelial cells	Medium	Not detected
Glial cells	High	Medium
Neuronal cells	High	Medium
Neuropil	Not detected	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	77.0

Male, age 5

Sample 1
TPM: 62.6

Female, age 40

Sample 2
TPM: 102.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 66.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	34.1

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 33.4

Samples: 114

Max RPKM: 52.4
Min RPKM: 16.8
Std RPKM: 5.9
Median RPKM: 33.9

GTEX-11OF3-2926-SM-5HL78

52.4

GTEX-13FXS-3126-SM-5J2NN

48.6

GTEX-NPJ8-1526-SM-2D7VU

46.6

GTEX-X4XX-3026-SM-3NMB2

43.7

GTEX-12ZZX-2926-SM-5GCOQ

43.1

GTEX-11PRG-2926-SM-5987A

41.5

GTEX-13JUV-2926-SM-5LZX7

41.4

GTEX-11ZUS-2926-SM-5FQSL

41.1

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 34.9

Samples: 108

Max RPKM: 57
Min RPKM: 12
Std RPKM: 8.8
Median RPKM: 36.1

GTEX-Q2AG-0011-R10A-SM-2HMLA

57.0

GTEX-NL3H-0011-R10A-SM-2I3E9

53.7

GTEX-131XH-0011-R10a-SM-5EGLJ

50.6

GTEX-NPJ8-0011-R10A-SM-2YUMO

49.7

GTEX-145MH-0011-R10b-SM-5PNUK

49.1

GTEX-12WSE-0011-R10b-SM-5P9JV

47.2

GTEX-QVJO-0011-R10A-SM-2S1QJ

47.0

GTEX-12ZZX-0011-R10b-SM-5DUWK

46.9

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue