We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SMARCC2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:43.4TPM
GTEx:35.3RPKM
FANTOM5:42.5Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA021213

 

Antibody CAB004321

 

Glandular cells

High   High  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

43.4

overview Male, age 62
Sample 1
TPM: 31.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 48.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 49.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 46.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 53.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 52.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 51.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 43.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 47.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

35.3

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 35.3
Samples: 106

Max RPKM: 65.4
Min RPKM: 17.8
Std RPKM: 7.6
Median RPKM: 34.5
GTEX-13FHO-2826-SM-5K7ZA 65.4
GTEX-145LV-1226-SM-5S2QH 50.3
GTEX-1399R-0526-SM-5IJEF 48.9
GTEX-OOBJ-2026-SM-3NB1R 48.8
GTEX-13O61-1726-SM-5KM46 48.6
GTEX-WFON-1626-SM-4LVMV 48.5
GTEX-12BJ1-1226-SM-5LUAE 48.4
GTEX-11NSD-0826-SM-5986S 48.0
GTEX-ZPU1-2026-SM-57WFI 46.3
GTEX-U4B1-1426-SM-4DXTX 46.1
GTEX-13NYS-1026-SM-5KLZT 45.6
GTEX-U412-2026-SM-4DXSI 45.1
GTEX-RWSA-2026-SM-47JX8 44.8
GTEX-XAJ8-0626-SM-47JY4 44.4
GTEX-UTHO-2726-SM-4JBH9 44.3
GTEX-S4Q7-1026-SM-4AD75 44.2
GTEX-WFG8-1826-SM-4LVM4 42.9
GTEX-111YS-1726-SM-5GIED 42.6
GTEX-QMRM-1426-SM-4R1K8 41.9
GTEX-11P7K-0626-SM-5985Z 41.5
GTEX-Y8E4-2126-SM-5RQHO 41.3
GTEX-11TT1-2026-SM-5EQM8 41.2
GTEX-YJ8A-1126-SM-5IFJU 41.0
GTEX-WOFM-0326-SM-4OOSL 40.9
GTEX-13FTW-1226-SM-5LZZ1 40.2
GTEX-ZLFU-1726-SM-4WWBU 40.1
GTEX-PLZ6-1126-SM-3P5ZR 39.9
GTEX-RM2N-1126-SM-48FCY 39.3
GTEX-117YX-1526-SM-5H12T 39.1
GTEX-11DYG-2526-SM-5N9BB 38.9
GTEX-SNOS-1026-SM-4DM4Y 38.9
GTEX-XGQ4-1826-SM-4AT6F 38.9
GTEX-QV31-1026-SM-4R1K3 38.7
GTEX-13O21-1126-SM-5N9EV 38.4
GTEX-ZTTD-2726-SM-57WFA 38.4
GTEX-Q2AI-1126-SM-48U19 38.3
GTEX-T8EM-1826-SM-4DM7F 37.7
GTEX-13N2G-1826-SM-5KM1I 37.3
GTEX-QV44-1526-SM-4R1KI 37.3
GTEX-WFG7-1826-SM-3GIL1 37.1
GTEX-XPVG-2026-SM-4B65E 37.1
GTEX-NPJ8-2426-SM-3MJHL 37.0
GTEX-YB5E-1826-SM-5IFI4 36.9
GTEX-14BMV-2326-SM-5RQJ4 36.6
GTEX-REY6-2126-SM-48FD9 36.3
GTEX-QLQ7-1326-SM-4R1JY 36.1
GTEX-11O72-2726-SM-5HL6K 35.5
GTEX-117YW-1426-SM-5EGGO 35.3
GTEX-12C56-1326-SM-5FQSV 35.1
GTEX-U3ZM-0926-SM-4DXSW 35.0
GTEX-131XF-1926-SM-5DUW4 34.8
GTEX-WH7G-1726-SM-4LVKY 34.8
GTEX-ZZ64-0926-SM-5E44L 34.8
GTEX-V955-1826-SM-4JBIL 34.3
GTEX-146FQ-1726-SM-5QGPX 34.2
GTEX-13G51-2326-SM-5LZXV 33.9
GTEX-13111-1326-SM-5GCNO 33.7
GTEX-XMK1-1026-SM-4B65H 33.7
GTEX-ZT9W-1626-SM-4YCDQ 33.7
GTEX-VJYA-1226-SM-3GIJ6 33.5
GTEX-Y9LG-1826-SM-4VBQC 33.4
GTEX-14ABY-0726-SM-5Q5DF 33.3
GTEX-ZY6K-1526-SM-5GZXE 33.0
GTEX-ZDYS-1226-SM-5IJF3 32.9
GTEX-132QS-1126-SM-5P9GC 32.8
GTEX-1399T-1226-SM-5P9J5 32.8
GTEX-139T6-1526-SM-5P9G6 32.7
GTEX-XOTO-2826-SM-4B65I 32.5
GTEX-12ZZZ-2026-SM-5LZWJ 32.3
GTEX-13OW8-0426-SM-5J2NR 31.0
GTEX-S3XE-1326-SM-4AD4H 30.9
GTEX-V1D1-1926-SM-4JBGX 30.8
GTEX-11P82-1126-SM-5BC5K 30.7
GTEX-OIZH-2026-SM-3NB1M 30.6
GTEX-11OF3-1726-SM-5GU5Q 30.5
GTEX-14C5O-2826-SM-5RQI6 30.1
GTEX-S95S-1026-SM-4B64M 30.1
GTEX-11EQ9-1726-SM-5HL6U 30.0
GTEX-11TUW-2126-SM-5GU7B 29.9
GTEX-144GM-0826-SM-5O98R 29.9
GTEX-SNMC-0926-SM-4DM5U 29.5
GTEX-X5EB-1826-SM-4E3K8 29.5
GTEX-QEG4-2226-SM-4R1JM 29.4
GTEX-148VJ-1826-SM-5Q5DV 29.3
GTEX-ZTX8-1026-SM-5EGHD 29.2
GTEX-S33H-1826-SM-4AD65 29.0
GTEX-11WQK-2726-SM-5EQMU 28.9
GTEX-111FC-2026-SM-5GZYO 28.8
GTEX-111CU-1526-SM-5N9FS 28.2
GTEX-11ZUS-2126-SM-5N9E6 28.2
GTEX-XQ3S-2526-SM-4BOOG 27.6
GTEX-13FXS-2826-SM-5LZYC 27.4
GTEX-145LT-0626-SM-5O99E 27.0
GTEX-WZTO-0926-SM-4PQZ3 26.5
GTEX-WK11-2626-SM-4OOSK 26.0
GTEX-14E6E-1126-SM-5S2R4 25.8
GTEX-13RTJ-2126-SM-5S2PZ 25.4
GTEX-OOBK-2025-SM-3LK5S 25.3
GTEX-SJXC-2026-SM-4DM6N 25.2
GTEX-132NY-2826-SM-5P9G2 24.8
GTEX-ZVP2-0826-SM-59HJ6 24.8
GTEX-U8XE-2526-SM-4E3IT 24.3
GTEX-12696-2226-SM-5EQ65 24.0
GTEX-NFK9-2226-SM-3MJGP 21.7
GTEX-YF7O-1926-SM-4W1YQ 21.4
GTEX-ZUA1-2826-SM-59HLE 17.8
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

42.5

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 42.5
FF:10022-101D4 73,79,93 years, male 42.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.