We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
JDP2
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.7TPM
GTEx:8.1RPKM
FANTOM5:121.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA059511

 

Adipocytes

Low  

Glandular cells

Medium  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

23.7

overview Female, age 52
Sample 1
TPM: 20.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 57.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 11.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 5.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 8.1
Samples: 214

Max RPKM: 20.5
Min RPKM: 3
Std RPKM: 3.1
Median RPKM: 7.2
GTEX-XQ8I-2426-SM-4WAXY 20.5
GTEX-X4XY-0926-SM-4E3JD 17.3
GTEX-YFCO-1826-SM-4W1YH 17.3
GTEX-13O3Q-2226-SM-5KM4O 17.1
GTEX-11DZ1-0326-SM-5N9BN 16.1
GTEX-14753-2426-SM-5LU8U 16.1
GTEX-XYKS-1326-SM-4BRUN 16.1
GTEX-13N1W-0626-SM-5MR4U 16.0
GTEX-11DXY-2326-SM-5GICW 15.9
GTEX-139TU-0626-SM-5KM3X 15.6
GTEX-ZDXO-0126-SM-5S2ND 14.8
GTEX-11OF3-1926-SM-59889 14.5
GTEX-ZWKS-2826-SM-5NQ74 14.1
GTEX-132NY-0826-SM-5K7Y7 14.0
GTEX-13W46-0826-SM-5LU3H 13.8
GTEX-S7SE-0826-SM-4AT4D 13.5
GTEX-11LCK-2426-SM-5HL5F 13.4
GTEX-11NSD-0926-SM-5N9DR 13.4
GTEX-11NV4-2026-SM-5N9DG 13.3
GTEX-13S86-1226-SM-5S2OA 12.6
GTEX-117XS-1926-SM-5GICO 12.3
GTEX-11ZUS-0826-SM-5FQUY 12.2
GTEX-13D11-1026-SM-5IJFB 12.2
GTEX-12WSM-1726-SM-5BC6J 12.1
GTEX-WYJK-1326-SM-3NB2T 11.8
GTEX-XMD2-0926-SM-4WWEF 11.8
GTEX-Y5V6-2126-SM-4WWFX 11.7
GTEX-YJ8O-2226-SM-5IFHW 11.7
GTEX-132AR-0826-SM-5EGK6 11.5
GTEX-Y8E4-1626-SM-5S2MW 11.5
GTEX-ZQUD-1926-SM-51MSA 11.4
GTEX-ZVT4-1026-SM-57WC4 11.4
GTEX-12KS4-0126-SM-5Q5A5 11.2
GTEX-145MN-1926-SM-5SIAI 10.9
GTEX-U8XE-0826-SM-4E3J1 10.9
GTEX-UTHO-1026-SM-3GAF7 10.8
GTEX-11I78-2226-SM-5PNYA 10.6
GTEX-13O61-1826-SM-5KM4I 10.6
GTEX-13PVQ-1026-SM-5KM3M 10.6
GTEX-S4Q7-1126-SM-4AD6R 10.6
GTEX-ZUA1-1526-SM-59HLS 10.6
GTEX-144GL-2026-SM-5LU3O 10.5
GTEX-Y3I4-1526-SM-4TT7K 10.4
GTEX-PSDG-1626-SM-48TCQ 10.2
GTEX-XQ3S-1326-SM-4BOPQ 10.2
GTEX-ZA64-1526-SM-5CVMD 10.2
GTEX-ZDYS-1126-SM-5K7UB 10.2
GTEX-ZYFC-0826-SM-5E44K 10.2
GTEX-11GSO-1926-SM-5A5K3 10.1
GTEX-ZDTT-2126-SM-5S2OJ 10.1
GTEX-117YX-1426-SM-5H12H 9.9
GTEX-11WQK-2426-SM-5GU5C 9.8
GTEX-RUSQ-2026-SM-4GIAK 9.8
GTEX-ZYT6-0126-SM-5E45J 9.8
GTEX-11EI6-0626-SM-5985T 9.5
GTEX-11O72-2126-SM-5N9FO 9.5
GTEX-139T6-1626-SM-5PNYZ 9.5
GTEX-ZTTD-1026-SM-51MRD 9.5
GTEX-11ONC-2126-SM-5HL6E 9.4
GTEX-13FTW-1426-SM-5LZWZ 9.3
GTEX-TKQ1-0226-SM-33HB5 9.3
GTEX-XGQ4-0926-SM-4AT4U 9.3
GTEX-ZVZQ-0826-SM-51MRF 9.3
GTEX-13OW8-0226-SM-5K7UP 9.2
GTEX-145MO-0826-SM-5NQBL 9.1
GTEX-WRHU-0326-SM-3MJFY 9.1
GTEX-1117F-2826-SM-5GZXL 9.0
GTEX-12WSN-1326-SM-5GCNT 9.0
GTEX-13O3P-0826-SM-5L3DH 8.9
GTEX-R55D-0826-SM-48FEA 8.9
GTEX-12WSK-2226-SM-5GCO5 8.8
GTEX-ZT9W-2026-SM-51MRA 8.8
GTEX-11WQC-1726-SM-5GU4W 8.7
GTEX-139T8-0826-SM-5L3DE 8.5
GTEX-X261-0626-SM-3NMD9 8.5
GTEX-REY6-2426-SM-48FF5 8.4
GTEX-YEC3-1026-SM-5IFI5 8.4
GTEX-145LT-0726-SM-5S2VM 8.3
GTEX-R53T-1526-SM-48FEK 8.1
GTEX-ZV6S-1826-SM-5NQ8D 8.1
GTEX-13CF2-2026-SM-5K7VI 8.0
GTEX-13FTX-1126-SM-5N9EN 8.0
GTEX-13NZB-2126-SM-5MR4Y 8.0
GTEX-YFC4-1426-SM-5IFJG 8.0
GTEX-ZQG8-0726-SM-5P9H9 8.0
GTEX-ZVTK-0326-SM-51MRR 8.0
GTEX-11DXZ-1926-SM-5GZZL 7.9
GTEX-13NZ9-1026-SM-5MR5K 7.9
GTEX-UPK5-2326-SM-3P5Z8 7.9
GTEX-ZAB4-2526-SM-5HL8M 7.9
GTEX-ZLFU-2126-SM-4WWEV 7.8
GTEX-ZYW4-0826-SM-5GIDG 7.8
GTEX-12BJ1-1826-SM-5HL9N 7.7
GTEX-QMRM-1626-SM-4R1KV 7.7
GTEX-S33H-0326-SM-4AD6N 7.7
GTEX-Y9LG-1426-SM-5IFJZ 7.7
GTEX-11EQ9-1826-SM-5Q5AJ 7.6
GTEX-S32W-2026-SM-4AD6E 7.5
GTEX-WOFL-0826-SM-3MJG1 7.5
GTEX-YB5K-1626-SM-5IFIN 7.5
GTEX-T2YK-2226-SM-32QPT 7.4
GTEX-145ME-1526-SM-5Q5F2 7.3
GTEX-VUSG-2226-SM-4KKZO 7.3
GTEX-WFON-1826-SM-3GILG 7.3
GTEX-ZZPU-0626-SM-5E43T 7.3
GTEX-13113-1726-SM-5GCOO 7.2
GTEX-13CF3-2126-SM-5IFJP 7.2
GTEX-146FH-0826-SM-5SI8T 7.2
GTEX-147F4-2826-SM-5NQBN 7.2
GTEX-WY7C-2726-SM-3NB3P 7.2
GTEX-XMD1-0826-SM-4AT52 7.2
GTEX-XV7Q-2326-SM-4BRVZ 7.2
GTEX-Y114-2026-SM-4TT7L 7.2
GTEX-1122O-1226-SM-5H113 7.1
GTEX-XUJ4-1926-SM-4BOOV 7.1
GTEX-Y8LW-1626-SM-5IFHX 7.1
GTEX-13FHO-0826-SM-5L3E8 7.0
GTEX-13NZ8-0126-SM-5IJCT 7.0
GTEX-XUW1-2326-SM-4BOO5 7.0
GTEX-Y5V5-2126-SM-4WWFO 7.0
GTEX-11GS4-2126-SM-5A5KR 6.9
GTEX-XBED-1626-SM-47JYN 6.9
GTEX-11P7K-0726-SM-5EGKX 6.8
GTEX-13N11-1726-SM-5J1OJ 6.8
GTEX-QVJO-1826-SM-447C9 6.8
GTEX-Y111-2026-SM-4SOJA 6.8
GTEX-11DXW-0626-SM-5N9ER 6.7
GTEX-1313W-0826-SM-5EQ4T 6.7
GTEX-TKQ2-1826-SM-33HB2 6.7
GTEX-U3ZN-1926-SM-4DXSG 6.7
GTEX-11TT1-2126-SM-5GU5Y 6.6
GTEX-12WSB-0626-SM-59HJO 6.6
GTEX-Q2AG-0326-SM-48U1O 6.6
GTEX-S341-1526-SM-4AD6K 6.6
GTEX-T5JW-2026-SM-4DM63 6.6
GTEX-T6MN-0726-SM-32PML 6.6
GTEX-ZYWO-2326-SM-5GZY4 6.6
GTEX-1192X-2326-SM-5987X 6.5
GTEX-11ZTT-2326-SM-5EQLG 6.5
GTEX-12ZZX-1126-SM-5EGKB 6.5
GTEX-RWS6-1926-SM-47JXY 6.5
GTEX-ZZ64-1226-SM-5E43R 6.5
GTEX-11PRG-0826-SM-5EQ6A 6.4
GTEX-ZEX8-2226-SM-57WC6 6.4
GTEX-11TUW-1826-SM-5BC5D 6.3
GTEX-X15G-1626-SM-3NMB3 6.3
GTEX-XMK1-1126-SM-4IHJ8 6.3
GTEX-ZTX8-1226-SM-4YCE9 6.3
GTEX-ZVT2-1826-SM-5NQ8W 6.3
GTEX-ZPIC-1126-SM-5BC7F 6.2
GTEX-1211K-1926-SM-5EQLB 6.1
GTEX-14E6E-1326-SM-5S2NR 6.1
GTEX-SIU7-1626-SM-4BRUK 6.1
GTEX-UJHI-1426-SM-3DB9C 6.1
GTEX-WXYG-2226-SM-4E3IM 6.1
GTEX-13O3O-0826-SM-5K7WE 6.0
GTEX-13PL6-2926-SM-5L3I2 6.0
GTEX-QDT8-0626-SM-48TYW 6.0
GTEX-YB5E-1726-SM-5IFJ3 6.0
GTEX-ZF29-1926-SM-5S2P1 5.9
GTEX-13OW5-2226-SM-5L3HC 5.8
GTEX-WYBS-0926-SM-3NM94 5.8
GTEX-13W3W-1226-SM-5LU4H 5.7
GTEX-TMMY-0726-SM-33HBE 5.7
GTEX-ZLV1-1426-SM-4WWES 5.7
GTEX-ZU9S-1926-SM-5NQBP 5.7
GTEX-ZXES-0826-SM-5E43C 5.7
GTEX-11P82-1326-SM-5HL62 5.6
GTEX-14ABY-2126-SM-5QGQZ 5.6
GTEX-T5JC-2126-SM-32PMO 5.6
GTEX-WI4N-1426-SM-3LK7H 5.6
GTEX-1314G-1226-SM-5BC6D 5.5
GTEX-QEL4-2126-SM-447AE 5.5
GTEX-RU72-0626-SM-46MUI 5.5
GTEX-ZY6K-1626-SM-5GZWV 5.5
GTEX-SE5C-2126-SM-4BRUJ 5.4
GTEX-1269C-2426-SM-5FQSN 5.3
GTEX-XUZC-1626-SM-4BRVP 5.3
GTEX-13FTY-2226-SM-5J1ND 5.2
GTEX-14AS3-1626-SM-5S2OY 5.2
GTEX-ZF3C-2326-SM-5S2MZ 5.2
GTEX-ZV7C-1826-SM-5NQ83 5.2
GTEX-144GM-0926-SM-5O994 5.1
GTEX-R3RS-0626-SM-48FE1 5.1
GTEX-132Q8-1426-SM-5EGK7 5.0
GTEX-R55F-1726-SM-2TF4R 5.0
GTEX-U3ZH-1426-SM-4DXSR 5.0
GTEX-ZF2S-2026-SM-5E461 5.0
GTEX-11EMC-2026-SM-5A5JV 4.9
GTEX-U412-1826-SM-4DXTJ 4.9
GTEX-ZVE2-1226-SM-5NQ8R 4.9
GTEX-11P81-1926-SM-5BC53 4.8
GTEX-TML8-1226-SM-32QON 4.8
GTEX-133LE-1726-SM-5K7VQ 4.7
GTEX-1399U-1826-SM-5PNZ1 4.7
GTEX-S4UY-0726-SM-4AD6X 4.7
GTEX-111YS-1926-SM-5GICC 4.6
GTEX-T2IS-1526-SM-32QPR 4.6
GTEX-131YS-0626-SM-5EGKL 4.5
GTEX-13QIC-2326-SM-5LU5N 4.5
GTEX-S4P3-1326-SM-4AD6V 4.5
GTEX-Y3IK-2326-SM-4WWDT 4.5
GTEX-Y5LM-1726-SM-4VDSX 4.5
GTEX-T6MO-0326-SM-32QOK 4.4
GTEX-VJWN-0726-SM-3GIJ8 4.3
GTEX-WYVS-1726-SM-3NMAY 4.2
GTEX-XOT4-0726-SM-4GIAW 4.2
GTEX-ZC5H-2626-SM-5J2MG 4.2
GTEX-11EM3-1326-SM-5N9C6 3.9
GTEX-131XW-0726-SM-5EGK3 3.8
GTEX-ZAJG-0626-SM-5HL8X 3.5
GTEX-QEG5-0726-SM-4R1JQ 3.3
GTEX-W5X1-2326-SM-3GIL6 3.2
GTEX-X4EP-2926-SM-3P5YQ 3.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

121.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 121.2
FF:10080-102A8 77 years, female 121.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.