Tissue expression of PMM2 - Staining in colon

COLON - Expression summary

RNA expression

HPA:	25.8	TPM
GTEx:	12.3	RPKM
FANTOM5:	42.7	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	25.8

Male, age 54

Sample 1
TPM: 27.9

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 19.4

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 24.6

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 19.5

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 18.2

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 23.8

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 34.0

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 31.1

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 23.8

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 37.4

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 28.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 23.4

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 23.1

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	12.3

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.8

Samples: 149

Max RPKM: 17.1
Min RPKM: 3.2
Std RPKM: 2.3
Median RPKM: 6.1

GTEX-13O1R-2426-SM-5KLZZ

17.1

GTEX-YJ8A-1726-SM-5P9IQ

15.1

GTEX-11TT1-0926-SM-5GU5M

14.3

GTEX-14E6C-2226-SM-5QGQG

14.3

GTEX-14A5H-1626-SM-5SIAN

12.8

GTEX-13OVJ-1826-SM-5KM2D

12.7

GTEX-Y5LM-1426-SM-5RQJL

11.4

GTEX-14C5O-2626-SM-5RQI5

11.2

Show all

Colon - Transverse

Colon - Transverse
RPKM: 16.5

Samples: 196

Max RPKM: 39.2
Min RPKM: 3.9
Std RPKM: 7.8
Median RPKM: 17

GTEX-XUJ4-2026-SM-4BOOW

39.2

GTEX-144GM-1226-SM-5LU52

38.2

GTEX-PWOO-1326-SM-48TCJ

36.6

GTEX-T5JW-1126-SM-4DM5V

33.2

GTEX-11TT1-1026-SM-5PNW7

32.3

GTEX-U4B1-1126-SM-4DXV3

32.3

GTEX-PWCY-1026-SM-48TD4

32.0

GTEX-146FQ-1926-SM-5NQBY

31.9

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	42.7

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 42.7

FF:10014-101C5

62,83,84 years, mixed

42.7