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MBTPS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:39.1TPM
GTEx:22.3RPKM
FANTOM5:49.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA056109

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

39.1
overview Male, age 54
Sample 1
TPM: 42.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 55.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 42.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 32.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 49.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 32.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 38.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 31.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 34.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 38.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 44.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 40.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 27.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.3

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 23.1
Samples: 149

Max RPKM: 29.8
Min RPKM: 15.8
Std RPKM: 2.7
Median RPKM: 23.5
GTEX-XUZC-1526-SM-4BRV4 29.8
GTEX-111YS-1826-SM-5GIEP 29.7
GTEX-XUW1-1826-SM-4BOQD 28.3
GTEX-145ME-1126-SM-5SIAT 27.7
GTEX-13D11-0626-SM-5LZYY 27.6
GTEX-XBED-1726-SM-47JYO 27.5
GTEX-117YX-0526-SM-5EGJH 27.3
GTEX-WQUQ-2626-SM-4MVNP 27.2
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 21.7
Samples: 196

Max RPKM: 31.7
Min RPKM: 6.6
Std RPKM: 3.6
Median RPKM: 21.6
GTEX-V955-1626-SM-4JBHJ 31.7
GTEX-XXEK-1926-SM-4BRVD 29.7
GTEX-13O3O-2526-SM-5L3DR 29.4
GTEX-S341-1426-SM-4AD6U 28.7
GTEX-X3Y1-1726-SM-4PQZL 28.7
GTEX-O5YW-1426-SM-3MJHF 28.5
GTEX-145ME-0826-SM-5O9AF 28.2
GTEX-RWS6-1826-SM-47JXX 28.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

49.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 49.9
FF:10014-101C5 62,83,84 years, mixed 49.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.