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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:45.6RPKM
FANTOM5:137.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA021641

 

Antibody HPA024553

 

Glial cells

Medium   Medium  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

45.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 45.6
Samples: 117

Max RPKM: 89.3
Min RPKM: 16.6
Std RPKM: 15.2
Median RPKM: 47.4
GTEX-T6MN-0011-R5A-SM-32QPD 89.3
GTEX-13G51-0011-R5a-SM-5L3EB 75.6
GTEX-T5JC-0011-R5A-SM-32PLK 75.2
GTEX-13FLW-0011-R5a-SM-5LZX6 72.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 69.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 69.5
GTEX-145MH-0011-R5a-SM-5P9JT 69.4
GTEX-RU72-0011-R5A-SM-2TF6U 68.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 67.6
GTEX-11OF3-0011-R5a-SM-57WB4 66.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 66.7
GTEX-UTHO-0011-R5A-SM-3GIJD 66.6
GTEX-131YS-0011-R5b-SM-5K7YB 65.8
GTEX-12WSC-0011-R5b-SM-5CVNS 65.2
GTEX-1399T-0011-R5b-SM-5IJDK 65.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 65.0
GTEX-1313W-0011-R5b-SM-5L3EP 64.7
GTEX-14BIM-0011-R5b-SM-5S2RM 62.5
GTEX-139TT-0011-R5b-SM-5K7W8 62.3
GTEX-WL46-0011-R5A-SM-3LK6V 60.6
GTEX-S7SE-0011-R5A-SM-2XCDA 60.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 59.5
GTEX-13FXS-0011-R5b-SM-5LZYE 59.3
GTEX-13VXU-0011-R5a-SM-5O9D7 58.9
GTEX-WVLH-0011-R5A-SM-3MJFW 58.7
GTEX-14ABY-0011-R5b-SM-5SI7B 58.1
GTEX-ZUA1-0011-R5b-SM-51MTG 57.6
GTEX-13X6J-0011-R5b-SM-5PNWT 57.4
GTEX-13OVL-0011-R5b-SM-5L3FU 56.1
GTEX-R55E-0011-R5A-SM-2TC5N 56.1
GTEX-11GSP-0011-R5a-SM-57WBE 55.7
GTEX-13JUV-0011-R5a-SM-5LZY5 55.7
GTEX-13OW6-0011-R5a-SM-5O9BK 55.7
GTEX-N7MS-0011-R5a-SM-2HMK8 55.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 55.5
GTEX-13SLX-0011-R5a-SM-5O9BV 54.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 54.3
GTEX-WZTO-0011-R5B-SM-3NMC5 54.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 52.3
GTEX-Z93S-0011-R5b-SM-4RGNI 52.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 52.0
GTEX-13NYB-0011-R5a-SM-5MR45 51.5
GTEX-RVPV-0011-R5A-SM-2TF69 51.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 51.0
GTEX-QVJO-0011-R5A-SM-2S1QM 51.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50.9
GTEX-11H98-0011-R5b-SM-57WCF 50.3
GTEX-11NV4-0011-R5a-SM-5NQ88 50.2
GTEX-12WSD-0011-R5b-SM-5CVNG 49.9
GTEX-X585-0011-R5A-SM-46MVI 49.8
GTEX-P44H-0011-R5A-SM-2XCEX 49.3
GTEX-13OW7-0011-R5b-SM-5O9DM 49.2
GTEX-132Q8-0011-R5a-SM-5IJDM 49.1
GTEX-OHPN-0011-R5A-SM-2I5FF 48.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 48.4
GTEX-145LS-0011-R5a-SM-5SI65 47.9
GTEX-13OW5-0011-R5b-SM-5L3FR 47.8
GTEX-RVPU-0011-R5A-SM-2XCAD 47.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 47.4
GTEX-N7MT-0011-R5a-SM-2I3G6 47.0
GTEX-13S7M-0011-R5b-SM-5P9HS 46.8
GTEX-13OVH-0011-R5b-SM-5KM4L 45.0
GTEX-13X6K-0011-R5b-SM-5PNUE 44.4
GTEX-13FLV-0011-R5a-SM-5LZWT 44.1
GTEX-WWYW-0011-R5A-SM-3NB3E 43.6
GTEX-13CZV-0011-R5a-SM-5K7XA 43.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 43.0
GTEX-13X6I-0011-R5a-SM-5PNWW 42.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 42.2
GTEX-TSE9-0011-R5A-SM-3DB7J 42.2
GTEX-12WSF-0011-R5a-SM-5HL8K 41.9
GTEX-13NYS-0011-R5a-SM-5MR4D 40.9
GTEX-13O3O-0011-R5b-SM-5KM44 40.6
GTEX-NL4W-0011-R5a-SM-2I3GD 40.6
GTEX-XOTO-0011-R5A-SM-4B657 40.6
GTEX-XMD1-0011-R5A-SM-4AT47 38.9
GTEX-12ZZX-0011-R5a-SM-5HL89 38.7
GTEX-ZXG5-0011-R5b-SM-57WBN 38.4
GTEX-YFC4-0011-R5a-SM-4RGLR 37.6
GTEX-PVOW-0011-R5A-SM-32PL7 37.1
GTEX-12WSB-0011-R5b-SM-5GU67 36.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 36.3
GTEX-YJ89-0011-R5a-SM-4V6GM 33.6
GTEX-14BIN-0011-R5b-SM-5SI78 32.6
GTEX-X4XX-0011-R5A-SM-46MWN 32.3
GTEX-T2IS-0011-R5A-SM-32QP4 32.0
GTEX-13JVG-0011-R5a-SM-5MR4O 31.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 31.5
GTEX-12WSH-0011-R5b-SM-5P9F3 31.3
GTEX-OXRN-0011-R5A-SM-2I5EF 30.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 30.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 30.4
GTEX-11WQC-0011-R5a-SM-5BC74 30.3
GTEX-144GL-0011-R5b-SM-5PNUJ 30.3
GTEX-X261-0011-R5A-SM-3NMB4 29.6
GTEX-144GO-0011-R5a-SM-5PNUR 29.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 29.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 29.1
GTEX-QMR6-0011-R5A-SM-32PKT 29.1
GTEX-NL3H-0011-R5a-SM-2I3GB 28.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 28.1
GTEX-ZV68-0011-R5a-SM-4YCDW 27.0
GTEX-13112-0011-R5b-SM-5DUV8 26.9
GTEX-13CIG-0011-R5b-SM-5L3F2 26.9
GTEX-139T8-0011-R5b-SM-5J1MO 26.2
GTEX-13FHP-0011-R5b-SM-5LZY2 26.0
GTEX-139TS-0011-R5b-SM-5J2MZ 25.1
GTEX-NPJ7-0011-R5a-SM-33HBK 25.0
GTEX-ZVT3-0011-R5a-SM-51MSI 24.0
GTEX-1445S-0011-R5a-SM-5PNUS 23.1
GTEX-11UD1-0011-R5b-SM-5P9FP 22.1
GTEX-S7PM-0011-R5A-SM-3NM8G 21.1
GTEX-13CF2-0011-R5a-SM-5LZWS 20.5
GTEX-1477Z-0011-R5b-SM-5PNUO 20.4
GTEX-12WSA-0011-R5b-SM-5GU5I 19.4
GTEX-145MG-0011-R5b-SM-5S2VU 17.4
GTEX-13NZA-0011-R5b-SM-5KM4K 16.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

137.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 137.4
FF:10164-103B2 76 years, female 173.1
FF:10379-105H1 89 years, female 101.6

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