We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
IMPA2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.9TPM
GTEx:7.3RPKM
FANTOM5:25.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA029561

 

Adipocytes

Not detected  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

14.9

overview Female, age 52
Sample 1
TPM: 11.8
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 31.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 11.1
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 5.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 7.3
Samples: 214

Max RPKM: 18.8
Min RPKM: 2
Std RPKM: 2.7
Median RPKM: 6.7
GTEX-TKQ1-0226-SM-33HB5 18.8
GTEX-S33H-0326-SM-4AD6N 18.2
GTEX-XQ8I-2426-SM-4WAXY 17.0
GTEX-11EQ9-1826-SM-5Q5AJ 16.4
GTEX-ZQUD-1926-SM-51MSA 14.4
GTEX-12WSK-2226-SM-5GCO5 14.0
GTEX-ZDYS-1126-SM-5K7UB 13.3
GTEX-Y5V6-2126-SM-4WWFX 13.2
GTEX-13D11-1026-SM-5IJFB 12.7
GTEX-13S86-1226-SM-5S2OA 12.4
GTEX-ZAB4-2526-SM-5HL8M 12.4
GTEX-11TT1-2126-SM-5GU5Y 12.2
GTEX-XMK1-1126-SM-4IHJ8 12.0
GTEX-139T6-1626-SM-5PNYZ 11.7
GTEX-13FHO-0826-SM-5L3E8 11.7
GTEX-145LT-0726-SM-5S2VM 11.7
GTEX-YFCO-1826-SM-4W1YH 11.7
GTEX-ZV6S-1826-SM-5NQ8D 11.5
GTEX-11ONC-2126-SM-5HL6E 11.3
GTEX-U8XE-0826-SM-4E3J1 11.3
GTEX-YEC3-1026-SM-5IFI5 11.2
GTEX-11NSD-0926-SM-5N9DR 10.6
GTEX-146FH-0826-SM-5SI8T 10.5
GTEX-144GM-0926-SM-5O994 10.4
GTEX-14AS3-1626-SM-5S2OY 10.4
GTEX-QMRM-1626-SM-4R1KV 10.4
GTEX-Y8E4-1626-SM-5S2MW 10.4
GTEX-14ABY-2126-SM-5QGQZ 10.3
GTEX-139TU-0626-SM-5KM3X 10.2
GTEX-PSDG-1626-SM-48TCQ 10.2
GTEX-ZA64-1526-SM-5CVMD 10.1
GTEX-ZT9W-2026-SM-51MRA 10.0
GTEX-ZYT6-0126-SM-5E45J 9.9
GTEX-ZZ64-1226-SM-5E43R 9.9
GTEX-Y9LG-1426-SM-5IFJZ 9.8
GTEX-UJHI-1426-SM-3DB9C 9.7
GTEX-XGQ4-0926-SM-4AT4U 9.7
GTEX-XV7Q-2326-SM-4BRVZ 9.7
GTEX-Y5LM-1726-SM-4VDSX 9.7
GTEX-1117F-2826-SM-5GZXL 9.5
GTEX-Y5V5-2126-SM-4WWFO 9.4
GTEX-S32W-2026-SM-4AD6E 9.3
GTEX-SIU7-1626-SM-4BRUK 9.3
GTEX-11I78-2226-SM-5PNYA 9.2
GTEX-144GL-2026-SM-5LU3O 9.2
GTEX-TKQ2-1826-SM-33HB2 9.2
GTEX-13FTW-1426-SM-5LZWZ 9.0
GTEX-S4Q7-1126-SM-4AD6R 9.0
GTEX-13N1W-0626-SM-5MR4U 8.9
GTEX-XUZC-1626-SM-4BRVP 8.9
GTEX-13CF3-2126-SM-5IFJP 8.8
GTEX-11DZ1-0326-SM-5N9BN 8.7
GTEX-ZVT2-1826-SM-5NQ8W 8.7
GTEX-132AR-0826-SM-5EGK6 8.6
GTEX-R53T-1526-SM-48FEK 8.6
GTEX-T6MO-0326-SM-32QOK 8.6
GTEX-ZLV1-1426-SM-4WWES 8.6
GTEX-ZV7C-1826-SM-5NQ83 8.5
GTEX-SE5C-2126-SM-4BRUJ 8.4
GTEX-Y114-2026-SM-4TT7L 8.4
GTEX-XUJ4-1926-SM-4BOOV 8.3
GTEX-11LCK-2426-SM-5HL5F 8.2
GTEX-ZYFC-0826-SM-5E44K 8.2
GTEX-11DXZ-1926-SM-5GZZL 8.1
GTEX-ZY6K-1626-SM-5GZWV 8.1
GTEX-VUSG-2226-SM-4KKZO 8.0
GTEX-WXYG-2226-SM-4E3IM 8.0
GTEX-ZLFU-2126-SM-4WWEV 8.0
GTEX-1399U-1826-SM-5PNZ1 7.9
GTEX-RWS6-1926-SM-47JXY 7.9
GTEX-11O72-2126-SM-5N9FO 7.8
GTEX-13O61-1826-SM-5KM4I 7.8
GTEX-12ZZX-1126-SM-5EGKB 7.7
GTEX-13NZB-2126-SM-5MR4Y 7.7
GTEX-1192X-2326-SM-5987X 7.6
GTEX-11ZUS-0826-SM-5FQUY 7.6
GTEX-UPK5-2326-SM-3P5Z8 7.6
GTEX-XQ3S-1326-SM-4BOPQ 7.6
GTEX-133LE-1726-SM-5K7VQ 7.5
GTEX-14E6E-1326-SM-5S2NR 7.5
GTEX-U3ZN-1926-SM-4DXSG 7.5
GTEX-R55D-0826-SM-48FEA 7.4
GTEX-RUSQ-2026-SM-4GIAK 7.4
GTEX-XUW1-2326-SM-4BOO5 7.4
GTEX-ZTX8-1226-SM-4YCE9 7.4
GTEX-ZVTK-0326-SM-51MRR 7.4
GTEX-139T8-0826-SM-5L3DE 7.3
GTEX-XYKS-1326-SM-4BRUN 7.3
GTEX-Y3IK-2326-SM-4WWDT 7.3
GTEX-13PL6-2926-SM-5L3I2 7.2
GTEX-S4UY-0726-SM-4AD6X 7.2
GTEX-11WQK-2426-SM-5GU5C 7.0
GTEX-12BJ1-1826-SM-5HL9N 7.0
GTEX-12WSN-1326-SM-5GCNT 7.0
GTEX-1314G-1226-SM-5BC6D 7.0
GTEX-QDT8-0626-SM-48TYW 7.0
GTEX-XMD1-0826-SM-4AT52 7.0
GTEX-ZVE2-1226-SM-5NQ8R 7.0
GTEX-13FTX-1126-SM-5N9EN 6.9
GTEX-13NZ9-1026-SM-5MR5K 6.9
GTEX-Q2AG-0326-SM-48U1O 6.9
GTEX-QEG5-0726-SM-4R1JQ 6.9
GTEX-U3ZH-1426-SM-4DXSR 6.9
GTEX-ZYW4-0826-SM-5GIDG 6.9
GTEX-12KS4-0126-SM-5Q5A5 6.8
GTEX-11P81-1926-SM-5BC53 6.7
GTEX-13W3W-1226-SM-5LU4H 6.7
GTEX-T2IS-1526-SM-32QPR 6.7
GTEX-WFON-1826-SM-3GILG 6.7
GTEX-145MN-1926-SM-5SIAI 6.6
GTEX-RU72-0626-SM-46MUI 6.6
GTEX-TML8-1226-SM-32QON 6.6
GTEX-S4P3-1326-SM-4AD6V 6.5
GTEX-X261-0626-SM-3NMD9 6.5
GTEX-ZVZQ-0826-SM-51MRF 6.5
GTEX-ZWKS-2826-SM-5NQ74 6.5
GTEX-1269C-2426-SM-5FQSN 6.4
GTEX-13113-1726-SM-5GCOO 6.4
GTEX-13QIC-2326-SM-5LU5N 6.4
GTEX-S341-1526-SM-4AD6K 6.4
GTEX-ZEX8-2226-SM-57WC6 6.4
GTEX-QVJO-1826-SM-447C9 6.3
GTEX-ZTTD-1026-SM-51MRD 6.3
GTEX-13NZ8-0126-SM-5IJCT 6.2
GTEX-WI4N-1426-SM-3LK7H 6.2
GTEX-ZDTT-2126-SM-5S2OJ 6.2
GTEX-ZPIC-1126-SM-5BC7F 6.2
GTEX-ZZPU-0626-SM-5E43T 6.2
GTEX-117YX-1426-SM-5H12H 6.1
GTEX-145ME-1526-SM-5Q5F2 6.1
GTEX-R3RS-0626-SM-48FE1 6.1
GTEX-WYVS-1726-SM-3NMAY 6.1
GTEX-ZUA1-1526-SM-59HLS 6.1
GTEX-11PRG-0826-SM-5EQ6A 6.0
GTEX-11ZTT-2326-SM-5EQLG 6.0
GTEX-12WSB-0626-SM-59HJO 6.0
GTEX-132NY-0826-SM-5K7Y7 6.0
GTEX-S7SE-0826-SM-4AT4D 6.0
GTEX-Y3I4-1526-SM-4TT7K 6.0
GTEX-XMD2-0926-SM-4WWEF 5.9
GTEX-ZXES-0826-SM-5E43C 5.9
GTEX-11EI6-0626-SM-5985T 5.8
GTEX-1211K-1926-SM-5EQLB 5.8
GTEX-13OW5-2226-SM-5L3HC 5.8
GTEX-T5JC-2126-SM-32PMO 5.8
GTEX-T5JW-2026-SM-4DM63 5.8
GTEX-U412-1826-SM-4DXTJ 5.8
GTEX-ZYWO-2326-SM-5GZY4 5.8
GTEX-ZF2S-2026-SM-5E461 5.7
GTEX-131YS-0626-SM-5EGKL 5.6
GTEX-13CF2-2026-SM-5K7VI 5.6
GTEX-13O3Q-2226-SM-5KM4O 5.6
GTEX-WYJK-1326-SM-3NB2T 5.6
GTEX-11EM3-1326-SM-5N9C6 5.5
GTEX-13O3O-0826-SM-5K7WE 5.5
GTEX-13OW8-0226-SM-5K7UP 5.5
GTEX-TMMY-0726-SM-33HBE 5.5
GTEX-UTHO-1026-SM-3GAF7 5.5
GTEX-Y8LW-1626-SM-5IFHX 5.5
GTEX-ZAJG-0626-SM-5HL8X 5.5
GTEX-ZQG8-0726-SM-5P9H9 5.5
GTEX-1122O-1226-SM-5H113 5.4
GTEX-11GSO-1926-SM-5A5K3 5.4
GTEX-13W46-0826-SM-5LU3H 5.4
GTEX-ZC5H-2626-SM-5J2MG 5.4
GTEX-117XS-1926-SM-5GICO 5.3
GTEX-11WQC-1726-SM-5GU4W 5.3
GTEX-QEL4-2126-SM-447AE 5.3
GTEX-T6MN-0726-SM-32PML 5.3
GTEX-Y111-2026-SM-4SOJA 5.3
GTEX-145MO-0826-SM-5NQBL 5.2
GTEX-13N11-1726-SM-5J1OJ 5.1
GTEX-WRHU-0326-SM-3MJFY 5.1
GTEX-X15G-1626-SM-3NMB3 5.1
GTEX-ZU9S-1926-SM-5NQBP 5.1
GTEX-11TUW-1826-SM-5BC5D 5.0
GTEX-12WSM-1726-SM-5BC6J 5.0
GTEX-XBED-1626-SM-47JYN 5.0
GTEX-YFC4-1426-SM-5IFJG 5.0
GTEX-11NV4-2026-SM-5N9DG 4.9
GTEX-WOFL-0826-SM-3MJG1 4.9
GTEX-13O3P-0826-SM-5L3DH 4.8
GTEX-R55F-1726-SM-2TF4R 4.8
GTEX-T2YK-2226-SM-32QPT 4.8
GTEX-YJ8O-2226-SM-5IFHW 4.8
GTEX-VJWN-0726-SM-3GIJ8 4.7
GTEX-YB5E-1726-SM-5IFJ3 4.7
GTEX-ZF29-1926-SM-5S2P1 4.7
GTEX-ZF3C-2326-SM-5S2MZ 4.7
GTEX-ZVT4-1026-SM-57WC4 4.7
GTEX-111YS-1926-SM-5GICC 4.6
GTEX-11EMC-2026-SM-5A5JV 4.6
GTEX-11P7K-0726-SM-5EGKX 4.6
GTEX-132Q8-1426-SM-5EGK7 4.6
GTEX-11DXW-0626-SM-5N9ER 4.5
GTEX-1313W-0826-SM-5EQ4T 4.4
GTEX-W5X1-2326-SM-3GIL6 4.4
GTEX-11DXY-2326-SM-5GICW 4.3
GTEX-13FTY-2226-SM-5J1ND 4.3
GTEX-14753-2426-SM-5LU8U 4.1
GTEX-REY6-2426-SM-48FF5 4.1
GTEX-WY7C-2726-SM-3NB3P 4.1
GTEX-WYBS-0926-SM-3NM94 4.1
GTEX-X4EP-2926-SM-3P5YQ 4.1
GTEX-YB5K-1626-SM-5IFIN 4.1
GTEX-ZDXO-0126-SM-5S2ND 4.1
GTEX-11GS4-2126-SM-5A5KR 4.0
GTEX-13PVQ-1026-SM-5KM3M 4.0
GTEX-X4XY-0926-SM-4E3JD 4.0
GTEX-11OF3-1926-SM-59889 3.9
GTEX-XOT4-0726-SM-4GIAW 3.3
GTEX-131XW-0726-SM-5EGK3 3.1
GTEX-147F4-2826-SM-5NQBN 3.1
GTEX-11P82-1326-SM-5HL62 2.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

25.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 25.2
FF:10080-102A8 77 years, female 25.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.