Tissue expression of RNF165 - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	RNF165
Gene description	Ring finger protein 165
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	6
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (parathyroid gland, cerebral cortex)
GTEx:	Tissue enhanced (cerebellum)
FANTOM5:	Tissue enhanced (cerebellum)

Protein evidence

Evidence at protein level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 2 antibodies. HPA041615 , HPA047798
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (parathyroid gland, cerebral cortex)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (cerebellum)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (cerebellum)

GENE INFORMATION
Gene name	RNF165 (HGNC Symbol)
Synonyms	ARKL2, RNF111L2
Description	Ring finger protein 165 (HGNC Symbol)
Entrez gene summary	Encoded in regions involved in pericentric inversions in patients with bipolar affective disorder. [provided by RefSeq, Jul 2008]
Chromosome	18
Cytoband	q21.1
Chromosome location (bp)	46326809 - 46463140
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000141622 (version 83.38)
Entrez gene	494470
UniProt	Q6ZSG1 (UniProt - Evidence at protein level)
neXtProt	NX_Q6ZSG1
Antibodypedia	RNF165 antibodies

PROTEIN BROWSER

RNF165-001	RNF165-003	RNF165-006	RNF165-007	RNF165-008	RNF165-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RNF165-001 ENSP00000269439 ENST00000269439	Q6ZSG1 [Direct mapping] RING finger protein 165 A0A059NXK6 [Target identity:100%; Query identity:100%] Putative ubiquitin ligase component Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] Show all	346 aa 39.5 kDa	No	0
RNF165-003 ENSP00000467730 ENST00000593230	K7EQ96 [Direct mapping] RING finger protein 165 Show all	Predicted intracellular proteins Show all		156 aa 18.1 kDa	No	0
RNF165-006 ENSP00000466208 ENST00000587853	K7ELT0 [Direct mapping] RING finger protein 165 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		22 aa 2.5 kDa	No	0
RNF165-007 ENSP00000466809 ENST00000590330	K7ELT0 [Direct mapping] RING finger protein 165 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		22 aa 2.5 kDa	No	0
RNF165-008 ENSP00000467609 ENST00000588679	K7EPZ9 [Direct mapping] RING finger protein 165 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		68 aa 7.5 kDa	No	0
RNF165-201 ENSP00000444285 ENST00000543885	Q6ZSG1 [Direct mapping] RING finger protein 165 Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] Show all	154 aa 17.9 kDa	No	0